BAC Information

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BAC

Clone NameB6Ng01-252L02
Chromosome8 (Build37)
Map Location 104,883,046 - 104,884,131
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneCdh11, EG667618, LOC100041368, 1600027J07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252L02.bB6Ng01-252L02.g
ACCGA059620GA059621
length1,109159
definitionB6Ng01-252L02.b B6Ng01-252L02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagttcagatcctgagaatacatgagaaatgcagaagtgtcagag
cacatcattgattcccaatggctagaggacattttcctggtcctaggagt
caggccccaagctggaaatatgcagctccagtttcaatgagacactcttt
cttaatcaaacagtagacactgagcgtggaaaagacacactttcaaatct
ctagtctccataggtacatatgaagcacaccacacacacacacacacaca
cacacacacatgcacacacacaccataaacatgaagcttactgtagtata
gtgttgtctattctggtcaaaatttaaatttatttttctttagaatttac
atgaatctaatatatagcatcacttctaagtcctattagtctacttattt
tgtttaaagaaacaaattttgtaaacgtaaagatgaaatactagcaatca
tatgtcgaggaggaaaaatcagctcaattcttcacagaaagagattagtg
aaaaggacaatcgttgtcaacaaagtacatacaccctcatagagagttga
gactctacttggtgaggagcacgctctttaaccctttaggatgagtaggc
tttgaagagtcttcctgaccacacaacatatagtctctaatggatcatga
agaagcatgtcttcatgcacactcctaggatatgctaaggcctaatagag
tcagcagtggtacaaatctctcctcatgaagcagcatgtttccttgcaac
aggagtttctgataggcttgtcggttgcctgtgtttctttaatgcattgg
ctcctaacacaagagttttcagtgaagcctttttctactgtgaatggtac
acactgcacacactgggcagctacatgcattaatgaagttattattgacc
catcaagttgaataccctactttgcaaaggtaggaaaaataaaccagctc
tttgatcttacgtagctctgcagtaaaagaatccaggcttggtgtttata
aattcccaggactatttaatattctcacaaccataattttaattattatt
ttattatggaggttatagtaccagttttgccctcaattaaacaatcagtt
gctttaaac

acatagagcaatccatggcgctggccacatatgtggcagagaatggcctt
gttggacatcagcgggaggagaggccattgggtctgagagtgttcgatgc
cccagtgtaggggaatgccagggcagtaggacagaagtgggtgggtgggt
gagggaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_104883046_104884131
seq2: B6Ng01-252L02.b_45_1153

seq1  GAATTCAGTTCAGATCCTGAGAATACATGAGAAATGCAGAAGTGTCAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTCAGATCCTGAGAATACATGAGAAATGCAGAAGTGTCAGAG  50

seq1  CACATCATTGATTCCCAATGGCTAGAGGACATTTTCCTGGTCCTAGGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCATTGATTCCCAATGGCTAGAGGACATTTTCCTGGTCCTAGGAGT  100

seq1  CAGGCCCCAAGCTGGAAATATGCAGCTCCAGTTTCAATGAGACACTCTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCCAAGCTGGAAATATGCAGCTCCAGTTTCAATGAGACACTCTTT  150

seq1  CTTAATCAAACAGTAGACACTGAGCGTGGAAAAGACACACTTTCAAATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATCAAACAGTAGACACTGAGCGTGGAAAAGACACACTTTCAAATCT  200

seq1  CTAGTCTCCATAGGTACATATGAAGCACACCACACACACACACACACACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTCTCCATAGGTACATATGAAGCACACCACACACACACACACACACA  250

seq1  CACACACACATGCACACACACACCATAAACATGAAGCTTACTGTAGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACATGCACACACACACCATAAACATGAAGCTTACTGTAGTATA  300

seq1  GTGTTGTCTATTCTGGTCAAAATTTAAATTTATTTTTCTTTAGAATTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGTCTATTCTGGTCAAAATTTAAATTTATTTTTCTTTAGAATTTAC  350

seq1  ATGAATCTAATATATAGCATCACTTCTAAGTCCTATTAGTCTACTTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCTAATATATAGCATCACTTCTAAGTCCTATTAGTCTACTTATTT  400

seq1  TGTTTAAAGAAACAAATTTTGTAAACGTAAAGATGAAATACTAGCAATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAGAAACAAATTTTGTAAACGTAAAGATGAAATACTAGCAATCA  450

seq1  TATGTCGAGGAGGAAAAATCAGCTCAATTCTTCACAGAAAGAGATTAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCGAGGAGGAAAAATCAGCTCAATTCTTCACAGAAAGAGATTAGTG  500

seq1  AAAAGGACAATCGTTGTCAACAAAGTACATACACCCTCATAGAGAGTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGACAATCGTTGTCAACAAAGTACATACACCCTCATAGAGAGTTGA  550

seq1  GACTCTACTTGGTGAGGAGCACGCTCTTTAACCCTTTAGGATGAGTAGGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTACTTGGTGAGGAGCACGCTCTTTAACCCTTTAGGATGAGTAGGC  600

seq1  TTTGAAGAGTCTTCCTGACCACACAACATATAGTCTCTAATGGATCATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGAGTCTTCCTGACCACACAACATATAGTCTCTAATGGATCATGA  650

seq1  AGAAGCATGTCTTCATGCACACTCCTAGGATATGCTAAGGCCTAATAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCATGTCTTCATGCACACTCCTAGGATATGCTAAGGCCTAATAGAG  700

seq1  TCAGCAGTGGTACAAATCTCTCCTCATGAAGCAGCATGTTTCCTTGCAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCAGTGGTACAAATCTCTCCTCATGAAGCAGCATGTTTCCTTGCAAC  750

seq1  AGGAGTTTCTGATAGGCTTGTCGGTTGCCTGTGTTTCTTTAATGCATTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTTTCTGATAGGCTTGTCGGTTGCCTGTGTTTCTTTAATGCATTGG  800

seq1  CTCCTAACACAAGAGTTTTCAGTGAAGCCTTTTTCTACTGTGAATGGTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAACACAAGAGTTTTCAGTGAAGCCTTTTTCTACTGTGAATGGTAC  850

seq1  ACACTGCACACACT-GGCAGCTACATGCATTAATG-AGTTATTATTGACC  898
      |||||||||||||| |||||||||||||||||||| ||||||||||||||
seq2  ACACTGCACACACTGGGCAGCTACATGCATTAATGAAGTTATTATTGACC  900

seq1  CATCAAGTTGAATA-CCTAC-TTGC-AAGGTAG--AAAATAAA-CAGCTC  942
      |||||||||||||| ||||| |||| |||||||  |||||||| ||||||
seq2  CATCAAGTTGAATACCCTACTTTGCAAAGGTAGGAAAAATAAACCAGCTC  950

seq1  TTTTGATCTTACGTAGC-CTGCAGTAAAAGAAT-CAAGCT--GTGTTTAT  988
       |||||||||||||||| ||||||||||||||| || |||  ||||||||
seq2  -TTTGATCTTACGTAGCTCTGCAGTAAAAGAATCCAGGCTTGGTGTTTAT  999

seq1  AAATT-CCAAGACTATTTAATATT-TCACAA-CATAATTT--AATATTAT  1033
      ||||| ||| |||||||||||||| |||||| ||||||||  | ||||||
seq2  AAATTCCCAGGACTATTTAATATTCTCACAACCATAATTTTAATTATTAT  1049

seq1  TTTATTATG--AGTTATAGTACCA-TTTTG-CCTCAA-TAAACAATCAG-  1077
      |||||||||   |||||||||||| ||||| |||||| ||||||||||| 
seq2  TTTATTATGGAGGTTATAGTACCAGTTTTGCCCTCAATTAAACAATCAGT  1099

seq1  TGC-TTAAAC  1086
      ||| ||||||
seq2  TGCTTTAAAC  1109


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