BAC Information

Click to search

BAC

Clone NameB6Ng01-252M17
Chromosome8 (Build37)
Map Location 103,521,529 - 103,522,493
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252M17.bB6Ng01-252M17.g
ACCGA059695GA059696
length1,254964
definitionB6Ng01-252M17.b B6Ng01-252M17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacagataaatgaatggaaataaaaaaatattctgagttaggtaa
cccagacccagaagaccaaatacagaatatatactatattcacttacacg
tagatgttaactgtaagatgcatgttaagcaagtaagagaataggaggga
acaataagagatccctaggaaagagaaataaaatcaataattatggatgg
attgggtgggctagaaaaagagaataatgaggagagacagtgggaagaaa
gtgactagggaggaaacataagtagagcgatctaagcagaaggatcattt
aaatcgcagtatggaagcctaatatagtaggaactccctaaaatattaac
atacataaagtcaatgtgcttgaaattgacaaacaattgtgtgaggcaac
tattcatctcatgtttcaaaatgaagctttgattactgagactgagtgac
atctaattgagttgttgaccaaatgggtccaagcacaactaataaacagc
ccaggttcttcccaagaatataaattgctcctcaccgacctactacatgg
ctctattgctgaagttaacacgtttacaactcattgaacatgggactata
gagctggtacccatatagagcctctacacggtggtctagtttctttggaa
tagcaaaatactctgcatagagtccggccacaaatcctttgatatacaat
gctgtcctacctgcaagatatgttcatggaatggaggcacgaaattagtg
agaatagccacctaatatctgatttgacttaagaaccattcatgtgatag
gaccaacacctaacagggcttgagtgatcaagaaaccgagattaagtcca
gagacctagagcataaccaagtactactgttctaaaaagattaactataa
aataaattatcaataaattagccctaattacgttcttctctactcattaa
tccatgtcttgctcatcatcttcagagaagggttctctccagaagctgat
gggtataaacactgcaatccaatagctggacactggtgaaaaagtgagaa
cactaaatgtcaatgtttctaccaaatacttccctttctcattccagtga
agattcagaattaatggaaagagtcgaggggatgatgatagccaagataa
caagtcctcttaacacaagaattcaatgcactatgaagttcaaaggaact
gaaaagactgtccattattcctgcaaggcgccgaaacaccatgtaaaggt
ggtc
gaattctgctttgaaaattgttgtctagttatatttgaaacacccagaac
tatctccatgtttagctggtaagaggtcttggtggaaccagaggtacctg
aatggcagtagctatgtcagtgtttggatatttggataaattgaatttct
caattaagcctttacaaacatgtgggaatgagacctacccccaaatctgt
gaattggaaatttttaaatagaaaactatgctcttaatgtgtattgaagt
aaaacaagaaaataaaagattaagattttgactgaggttctcttgagtta
ttacagtacataccttaagaaagaaaaatataaatatttatctagaggtg
taaattgccatgtcattaaatatatagtatctataaatttcactattctc
agaatcacctgaatttacatctgtttaactcatagtataatataaacaac
agaactttttgcataacggtaaagcatagcatatggccagcttgtattgc
aattgtgaatatatagtaagaaaatatgtgtcaaaccatttagttgtttg
gataatttacagagaaacaataaagatatacatattctattggcctacat
ttgtacacgtgtttttatgcacatatcaaacagcaaatgaaatgagtaat
acaatagaatgtaactttacattatatgagataatattaagattgtcaga
aaattcatatttatagattcatagcgaaaaactataaataaatttaagtg
taaggagtatgagaaattattttaatgtgatagttattacaggagagcta
acaggagaaacataatttcaaacaattatgctgtgtatgtgagtttgtgt
ctgaatatatatatatatatatatacacatacacatatacatatatacat
acacacacgcgcgtgcatgtgtgtgtgtgcatgtgtgagtgtgagtgtga
gtgttgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_103521529_103522493
seq2: B6Ng01-252M17.g_66_1029

seq1  GAATTCTGCTTTGAAAATTGTTGTCTAGTTATATTTGAAACACCCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCTTTGAAAATTGTTGTCTAGTTATATTTGAAACACCCAGAAC  50

seq1  TATCTCCATGTTTAGCTGGTAAGAGGTCTTGGTGGAACCAGAGGTACCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCATGTTTAGCTGGTAAGAGGTCTTGGTGGAACCAGAGGTACCTG  100

seq1  AATGGCAGTAGCTATGTCAGTGTTTGGATATTTGGATAAATTGAATTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAGTAGCTATGTCAGTGTTTGGATATTTGGATAAATTGAATTTCT  150

seq1  CAATTAAGCCTTTACAAACATGTGGGAATGAGACCTACCCCCAAATCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGCCTTTACAAACATGTGGGAATGAGACCTACCCCCAAATCTGT  200

seq1  GAATTGGAAATTTTTAAATAGAAAACTATGCTCTTAATGTGTATTGAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGGAAATTTTTAAATAGAAAACTATGCTCTTAATGTGTATTGAAGT  250

seq1  AAAACAAGAAAATAAAAGATTAAGATTTTGACTGAGGTTCTCTTGAGTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAGAAAATAAAAGATTAAGATTTTGACTGAGGTTCTCTTGAGTTA  300

seq1  TTACAGTACATACCTTAAGAAAGAAAAATATAAATATTTATCTAGAGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGTACATACCTTAAGAAAGAAAAATATAAATATTTATCTAGAGGTG  350

seq1  TAAATTGCCATGTCATTAAATATATAGTATCTATAAATTTCACTATTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTGCCATGTCATTAAATATATAGTATCTATAAATTTCACTATTCTC  400

seq1  AGAATCACCTGAATTTACATCTGTTTAACTCATAGTATAATATAAACAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCACCTGAATTTACATCTGTTTAACTCATAGTATAATATAAACAAC  450

seq1  AGAACTTTTTGCATAACGGTAAAGCATAGCATATGGCCAGCTTGTATTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTTTGCATAACGGTAAAGCATAGCATATGGCCAGCTTGTATTGC  500

seq1  AATTGTGAATATATAGTAAGAAAATATGTGTCAAACCATTTAGTTGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGAATATATAGTAAGAAAATATGTGTCAAACCATTTAGTTGTTTG  550

seq1  GATAATTTACAGAGAAACAATAAAGATATACATATTCTATTGGCCTACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTACAGAGAAACAATAAAGATATACATATTCTATTGGCCTACAT  600

seq1  TTGTACACGTGTTTTTATGCACATATCAAACAGCAAATGAAATGAGTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACACGTGTTTTTATGCACATATCAAACAGCAAATGAAATGAGTAAT  650

seq1  ACAATAGAATGTAACTTTACATTATATGAGATAATATTAAGATTGTCAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATAGAATGTAACTTTACATTATATGAGATAATATTAAGATTGTCAGA  700

seq1  AAATTCATATTTATAGATTCATAGCGAAAAACTATAAATAAATTTAAGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATATTTATAGATTCATAGCGAAAAACTATAAATAAATTTAAGTG  750

seq1  TAAGGAGTATGAGAAATTATTTTAATGTGATAGTTATTACAGGAGAGCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGTATGAGAAATTATTTTAATGTGATAGTTATTACAGGAGAGCTA  800

seq1  ACAGGAGAAACATAATTTCAAACAATTATGCTGTGTATGTGAGTTTGTGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAAACATAATTTCAAACAATTATGCTGTGTATGTGAGTTTGTGT  850

seq1  CTGAATATATATATATATATATATACACATACACATATACATATATACAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAATATATATATATATATATATACACATACACATATACATATATACAT  900

seq1  ACACACACGCGCGTGCATGTGTGTGTGTGCATGTGTGAGTGTGAGTGTGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACGCGCGTGCATGTGTGTGTGTGCATGTGTGAGTGTGAGTGTGA  950

seq1  GTGTGTGTGTGTGTG  965
      |||| ||||||||||
seq2  GTGT-TGTGTGTGTG  964