BAC Information

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BAC

Clone NameB6Ng01-254H22
Chromosome8 (Build37)
Map Location 83,148,798 - 83,149,611
singlet/doubletsinglet
Overlap geneFrem3
Upstream geneOtud4, Tpd52-ps, Abce1, Anapc10, LOC100039439, Hhip, LOC546075, Gypa
Downstream geneSmarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254H22.bB6Ng01-254H22.g
ACCGA060946GA060947
length1,015325
definitionB6Ng01-254H22.b B6Ng01-254H22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaagtcaggttcattctgtgtaaactctcagtctccttgtttaa
ttacaggttatttatgtgtatatgtgtgcacatgagcctactgtatatat
gtgaaccacatgcatgcaggtacccaaagaggcagaaagagagcgtcagc
tccgtgaaactgaatgtagatatggttgtgagctgcccaatttgggtgct
cagaaccaaacccgggttcttgtacagcaagtactcttagcttctgagcg
atttctctgatcccaagataagaggagaattacttttgtgtgtttctgag
aattgaacttaaggcctgtcttagtgttctgttgctgtgaagagacacca
tgatcacagccacactttattattattattattattattattattattat
catcattattatcatcattatttactttacatcctgatcacagccctcct
ctcttcccagaactacccttacaaatccctccttccattactccttcccc
ttctccctagagaaagggagccctccttgggtaccaccccaccctgggac
atctaatcccagaagaactaggcaaatcctctgccattgaggtccaacca
gacagtccaggagatcaaatggtagggaacaaagaccaagacaaactctg
cttcacttactagggaaaccagacttgctcatttgctacaaatgtgtagg
gggccaaggtacagcccctgcatgccccctggttgatggcctaagccctg
tgagtacccagaggcccaggttagttgacactgtggtcttcttgtggtgt
ccttgatccctccagcttgctcacttctatccccaactcttccacaagat
tccctggtctccgtctgatgtttctttttgggtctctacatatgtttcta
tcagctattggatgaagcctctcaggaggcagttctgctaggttcctgtc
tgcaagcatagcaaagtatcattaatagtgtcaggggttgggcttctccc
atggaatgggttctt
aatggcgtcatttgtctcataatgtcgtgccagggcatttttttaaaaaa
cattatagatcccttatttgtatattacggcttctggcactgtgttttta
tgacagtcctgtgtgtgaatacgtgtgtctccatctatatgtttcctgtg
cttttgctttgactttctttttattttttaaagtttttatttatttatta
tttatatgagaacactgtggctgcttcagacactccagaagggagcatta
gattccattacagatggttgtgaggcaccatgtggttgctgggaattgaa
ctcaggacctctggaagagcagtca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_83148798_83149611
seq2: B6Ng01-254H22.b_49_862

seq1  GAATTCAAAGTCAGGTTCATTCTGTGTAAACTCTCAGTCTCCTTGTTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGTCAGGTTCATTCTGTGTAAACTCTCAGTCTCCTTGTTTAA  50

seq1  TTACAGGTTATTTATGTGTATATGTGTGCACATGAGCCTACTGTATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAGGTTATTTATGTGTATATGTGTGCACATGAGCCTACTGTATATAT  100

seq1  GTGAACCACATGCATGCAGGTACCCAAAGAGGCAGAAAGAGAGCGTCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACCACATGCATGCAGGTACCCAAAGAGGCAGAAAGAGAGCGTCAGC  150

seq1  TCCGTGAAACTGAATGTAGATATGGTTGTGAGCTGCCCAATTTGGGTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTGAAACTGAATGTAGATATGGTTGTGAGCTGCCCAATTTGGGTGCT  200

seq1  CAGAACCAAACCCGGGTTCTTGTACAGCAAGTACTCTTAGCTTCTGAGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAAACCCGGGTTCTTGTACAGCAAGTACTCTTAGCTTCTGAGCG  250

seq1  ATTTCTCTGATCCCAAGATAAGAGGAGAATTACTTTTGTGTGTTTCTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTCTGATCCCAAGATAAGAGGAGAATTACTTTTGTGTGTTTCTGAG  300

seq1  AATTGAACTTAAGGCCTGTCTTAGTGTTCTGTTGCTGTGAAGAGACACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAACTTAAGGCCTGTCTTAGTGTTCTGTTGCTGTGAAGAGACACCA  350

seq1  TGATCACAGCCACACTTTATTATTATTATTATTATTATTATTATTATTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCACAGCCACACTTTATTATTATTATTATTATTATTATTATTATTAT  400

seq1  CATCATTATTATCATCATTATTTACTTTACATCCTGATCACAGCCCTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATTATTATCATCATTATTTACTTTACATCCTGATCACAGCCCTCCT  450

seq1  CTCTTCCCAGAACTACCCTTACAAATCCCTCCTTCCATTACTCCTTCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCCAGAACTACCCTTACAAATCCCTCCTTCCATTACTCCTTCCCC  500

seq1  TTCTCCCTAGAGAAAGGGAGCCCTCCTTGGGTACCACCCCACCCTGGGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCCTAGAGAAAGGGAGCCCTCCTTGGGTACCACCCCACCCTGGGAC  550

seq1  ATCTAATCCCAGAAGAACTAGGCAAATCCTCTGCCATTGAGGTCCAACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAATCCCAGAAGAACTAGGCAAATCCTCTGCCATTGAGGTCCAACCA  600

seq1  GACAGTCCAGGAGATCAAATGGTAGGGAACAAAGACCAAGACAAACTCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTCCAGGAGATCAAATGGTAGGGAACAAAGACCAAGACAAACTCTG  650

seq1  CTTCACTTACTAGGGAAACCAGACTTGCTCATTTGCTACAAATGTGTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTACTAGGGAAACCAGACTTGCTCATTTGCTACAAATGTGTAGG  700

seq1  GGGCCAAGGTACAGCCCCTGCATGCCCCCTGGTTGATGGCCTAAGCCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCAAGGTACAGCCCCTGCATGCCCCCTGGTTGATGGCCTAAGCCCTG  750

seq1  TGAGTACCCAGAGGCCCAGGTTAGTTGACACTGTGGTCTTCTTGTGGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACCCAGAGGCCCAGGTTAGTTGACACTGTGGTCTTCTTGTGGTGT  800

seq1  CCTTGATCCCTCCA  814
      ||||||||||||||
seq2  CCTTGATCCCTCCA  814