BAC Information

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BAC

Clone NameB6Ng01-255L06
Chromosome8 (Build37)
Map Location 105,373,365 - 105,374,488
singlet/doubletsinglet
Overlap genenone
Upstream geneCdh11
Downstream geneEG667618, LOC100041368, 1600027J07Rik, LOC100041397
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255L06.bB6Ng01-255L06.g
ACCGA061846GA061847
length1,2521,102
definitionB6Ng01-255L06.b B6Ng01-255L06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atggggggccggctataggggtttgagggccaatggaacgaaaacgtacg
tttatggtataacttattgattataatacagtatacaaaggtcccttttc
agggaccctttcgtatgttgtagctgattttattttcttcttttcttttg
ggtgcttttaatagccatatatgatgtttcatataaagttaaaagtttcc
ccatctgtctatctatagcgtcatgtttttcaggatttcttaatttctgc
agcagtttagatatatatttcgcaggtaactttattattaatgaattatg
ggattgatacatttcctttgtccaatctaaatcttttcctgatttcaata
cctcactctcatctctattaattataaaaccgagctttccatacggacct
gttaaatatgattgtaattgtctatactcagatggacctaattcttcaaa
atttttagcatcaaaaacaacttgtcttgttttatagtcctccaatactc
gtttccaaaaatcagatttgccaccattggtgcctataatatctcgtctc
tgaactgcgttaccatttggatgggacttgatgtctgttaggtgggatgc
aaatactattcttagtgcgtctaaacaccattgttcaaattcagtggcac
cttcatttcctatcggtatctgatctagatgagtagttatttgacctatt
gttttatttctaatggctgaattatctgaaataatattaatatcatattc
gtcatttatctcctctgcttcctctggagcaagtgcattacgatttagat
tcaaaccaagccagtaacatggatgaattaataatttctcattactttca
aaacctttatctggagttcgcccgtcatggcaaaatgaataggatgaggt
gtttttatcacgaataccaacaaatcctacactatacaaactttggagaa
ttcctcaagaatgcttgacacctttgtgattctaaagtgctgtcaggcga
aatgatggaacagaggaaaatcattggtgagttcgatatctagtaaacca
tttaatgccagggaattggcttgctgtgatctgtgtgaacatgattcatt
tcagactttgactatttttttgagaagttagctgtatcagcaatttaaat
cactgtaagcaacaagccttctggctaggatggccatatttgacctggat
cagatgcgaactagcattaccatggaggatgcagggaggacaacctttac
ac

gaattccataaatggaattacatcctatttccaatttctggttcacatgg
catttacagttatctaccattccttaagatattgtagagtttttcctttg
tactaggctttccaagaaaatttcctgcttcatataaatacttaatagac
agaaatctttcctgggaaactgctaaagataacatgattttaggttataa
attaaaagattactaaaattcacagacattctatgtctaggaatgtttgt
taatttgagacccccctctctccatgtttatctttaatctcccaaccagc
tgtctcccataaaaagatatttctgtttttagttacaaatctgttataaa
gataaaactcactcataaacacacaactgcatgcagacttttttttttct
gctgaccttatagaagtatatccagatgaaaaatattaagtttgtttaga
aatagaaactgcattcttctggccttgatggagaccctatgttcatagat
tttcaaggactctctgtacctctctctgagcctctgaggaagaacacagt
cttctgttacatttatgttttagtcccatcgcaagtaagcaaaaggcttt
ggaacattctgatttcaggaattagtttctatcgggtactttttgaattt
agcaattaactcttcgttaaggcaggtagcagttgcatagagaaaacaaa
gaaatccaagcatccagtgaatagcacacatttcctaggtagtgattaac
tagctcatatcactgtttactgttctccttgggtggtgggatccttacta
tacaatgtgttggatgatgttgtatagtccttcttttgttcccctaaacc
tagtgttgtacatataataaaatagttaattaatgccaaacatagttact
ggcaattaaattgctatgatagatgttattcagttaatttacaaagaaaa
tattgtagatttcccgagtctttgtgggactagatgtattctttcttgtg
tctactcacagtctgtgagtaaatgtgccttttcagtctttttttttttc
atgcatttttttccccagaacattgttaactgatctctggcaacagccta
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_105373365_105374488
seq2: B6Ng01-255L06.g_67_1168

seq1  GAATTCCATAAATGGAATTACATCCTATTTCCAATTTCTGGTTCACATGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAATGGAATTACATCCTATTTCCAATTTCTGGTTCACATGG  50

seq1  CATTTACAGTTATCTACCATTCCTTAAGATATTGTAGAGTTTTTCCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAGTTATCTACCATTCCTTAAGATATTGTAGAGTTTTTCCTTTG  100

seq1  TACTAGGCTTTCCAAGAAAATTTCCTGCTTCATATAAATACTTAATAGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGGCTTTCCAAGAAAATTTCCTGCTTCATATAAATACTTAATAGAC  150

seq1  AGAAATCTTTCCTGGGAAACTGCTAAAGATAACATGATTTTAGGTTATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCTTTCCTGGGAAACTGCTAAAGATAACATGATTTTAGGTTATAA  200

seq1  ATTAAAAGATTACTAAAATTCACAGACATTCTATGTCTAGGAATGTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAAGATTACTAAAATTCACAGACATTCTATGTCTAGGAATGTTTGT  250

seq1  TAATTTGAGACCCCCCTCTCTCCATGTTTATCTTTAATCTCCCAACCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTGAGACCCCCCTCTCTCCATGTTTATCTTTAATCTCCCAACCAGC  300

seq1  TGTCTCCCATAAAAAGATATTTCTGTTTTTAGTTACAAATCTGTTATAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCCATAAAAAGATATTTCTGTTTTTAGTTACAAATCTGTTATAAA  350

seq1  GATAAAACTCACTCATAAACACACAACTGCATGCAGACTTTTTTTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAACTCACTCATAAACACACAACTGCATGCAGACTTTTTTTTTTCT  400

seq1  GCTGACCTTATAGAAGTATATCCAGATGAAAAATATTAAGTTTGTTTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACCTTATAGAAGTATATCCAGATGAAAAATATTAAGTTTGTTTAGA  450

seq1  AATAGAAACTGCATTCTTCTGGCCTTGATGGAGACCCTATGTTCATAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAAACTGCATTCTTCTGGCCTTGATGGAGACCCTATGTTCATAGAT  500

seq1  TTTCAAGGACTCTCTGTACCTCTCTCTGAGCCTCTGAGGAAGAACACAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGGACTCTCTGTACCTCTCTCTGAGCCTCTGAGGAAGAACACAGT  550

seq1  CTTCTGTTACATTTATGTTTTAGTCCCATCGCAAGTAAGCAAAAGGCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTTACATTTATGTTTTAGTCCCATCGCAAGTAAGCAAAAGGCTTT  600

seq1  GGAACATTCTGATTTCAGGAATTAGTTTCTATCGGGTACTTTTTGAATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATTCTGATTTCAGGAATTAGTTTCTATCGGGTACTTTTTGAATTT  650

seq1  AGCAATTAACTCTTCGTTAAGGCAGGTAGCAGTTGCATAGAGAAAACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATTAACTCTTCGTTAAGGCAGGTAGCAGTTGCATAGAGAAAACAAA  700

seq1  GAAATCCAAGCATCCAGTGAATAGCACACATTTCCTAGGTAGTGATTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCCAAGCATCCAGTGAATAGCACACATTTCCTAGGTAGTGATTAAC  750

seq1  TAGCTCATATCACTGTTTACTGTTCTCCTTGGGTGGTGGGATCCTTACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCATATCACTGTTTACTGTTCTCCTTGGGTGGTGGGATCCTTACTA  800

seq1  TACAATGTGTTGGATGATGTTGTATAGTCCTTCTTTTGTTCCCCTAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TACAATGTGTTGGATGATGTTGTATAGTCCTTCTTTTGTTCCCCT-AAAC  849

seq1  CTAGTGTTGTACATATAATAAAATAGTTAATTAATGCCAAAACATAGTTA  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTAGTGTTGTACATATAATAAAATAGTTAATTAATGCC-AAACATAGTTA  898

seq1  CTGGCAATTAAATTGCTATGATAGATGTTATTCAGTTAATTTTACAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||   | |||
seq2  CTGGCAATTAAATTGCTATGATAGATGTTATTCAGTTAATTT---ACAAA  945

seq1  GAAAATATTGTAGAATTTCCCGAGTTCTTTGTGGGACTTAGATTGTTATT  1000
      ||||||||||||| |||||||||| |||||||||||| |||||   ||||
seq2  GAAAATATTGTAG-ATTTCCCGAG-TCTTTGTGGGAC-TAGAT--GTATT  990

seq1  CTTTCTTGTGTCTACCTCACCAGTTCTGTTGAGGTAAAATGTGGCTTTTT  1050
      |||||||||||||| |||| ||| |||| ||||   |||||| || ||||
seq2  CTTTCTTGTGTCTA-CTCA-CAG-TCTG-TGAG--TAAATGT-GCCTTTT  1033

seq1  CAGGTCTTTTTTTTTTTCATGCATTTTTTCCCCCAGAAACAATGGTAACT  1100
      || |||||||||||||||||||||||||| |||||| |||| || |||| 
seq2  CA-GTCTTTTTTTTTTTCATGCATTTTTTTCCCCAG-AACATTGTTAAC-  1080

seq1  TGATCTCTGGGCACAACAG-CTAAA  1124
      ||||||||||   |||||| |||||
seq2  TGATCTCTGG---CAACAGCCTAAA  1102


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