BAC Information

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BAC

Clone NameB6Ng01-256H19
Chromosome8 (Build37)
Map Location 80,280,095 - 80,280,761
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039211, LOC384847, Nr3c2, Arhgap10, LOC100039235, AI931714, Tmem34, Ednra
Downstream geneEG622803, Ttc29, Pou4f2, LOC100039422, Rbmxrt, Slc10a7, LOC100039466
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256H19.bB6Ng01-256H19.g
ACCGA062435GA062436
length1,188947
definitionB6Ng01-256H19.b B6Ng01-256H19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacataataaaaagcaatctacagcaaacc
agtagccaacatcaaagtaaatggtgagaagcttgaagcaatcccactaa
aatcagggactagacaaggctgcctgcccactttctccctacctattcaa
catttccttgaagtcctagccagagcaattagacaacaaaaggagataaa
ggggatacaaattggaaaggaagaagtcaaaatatcactttttgcagatg
atatgatattatatataagtgaccctaaaaattccaccagagaactccta
aacctgataaacagcttcagtgatataaaaattaactcaaacaagtcaat
ggactttctctacacaaagaataagcaggctgagaaagaaattagggaaa
caatacctttctcaatagtcacaaataatataaaataccttggcgtgact
ctaactaaggaagtgaaagatctgtatgataagaacttcaagtctctgaa
gaaagaaattaaagatctcaaaagatggaaagatctcacatgctcatgga
ttggcaggatcaatatagtaaaaatgactatcttgtcgaaagcaatctat
agattcaatgcaatccccatcaaaattccaactcaattcttcaatgtatt
agaaagggtaatctgcaaattcatctggaataacaaaaaacctaggatag
caaaaagtcttctcaaggataaaagaacctctggtggaatcaccatgcct
gacctaaagctgtacgacagagcaattgtgataaaaactgcatggtactg
gtatagcgacagacaagtagaccaatggaatagaattgaagacccagaaa
tgaacccacacacctatggtcactagatctttgacaagggagctaaaacc
atccagtggaaaaacagcattttcaagaaatggtgctgaccacaactggt
agaagaatgcaaattggtccattcctatctccttgtactaaaggtcaaat
ctaagtggatcagagctccacataaaaccagagacactgaaacttataga
ggagaaagtgggggaaagcctcgaagttattgccacaggggaaaaaattc
cctgattagacaggcatgctgtgctgtagatgagactgaacatatgggaa
cctcatgaaccttcacaaggccttccttttaaggccca
gaattcattttttttttttttataccgactccatgggaaattaggagtct
agaaagactattttaatggtccccttctcttttatacctatacaggaagt
gcttaaagtagttaaggaacattttcttacttctcaaatgtctcaagtgg
tcatactataaagaagatgggcaggcaggacttccagtggaaggaggggg
acatcgacacacccacaaaaccttcaacctaaaatttgtcttgcttgcaa
gatgtacagaaataaagatgaagcagagactgaagggatggccaaccaat
gactggcccaacttgagacccatcccaaggcagagagccaacccctgaag
tggggcgtggcccaatgttgctagtattataatgttaattttggtcccca
aaactgcttagtctgcatgtaagacactgagggactctgcccccagttgg
ttctgattggtaaataaagatgccagcagccaatgattgggcagggcata
cagaggcaggactttttggattcttgggcttgagacagagaggaaggagg
aagaagatccaccatgctgggataaggagaagaggagagacaccatgcct
gagaaaagtgggtcacagggaggcatagccagcatgtgaaggcgctggga
gagtgtggcccagttgggcagtcctctgggttcagggaagccaaagtaga
tatagattttatcagtggaagatggattaaccacatggaggttaggaact
gacccaagtgttgcacagtttacagcatatcaaaagataaaccggtaaga
aggacacatgctccactatgttcatagcagccttatttataatagccaga
agctggaaagaacccagatgcccctcaacagaggaatggatacagaaaat
gtggtacatttacacaatggagtactactcaactattaaaaagaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_80280095_80280761
seq2: B6Ng01-256H19.g_68_734

seq1  GAATTCATTTTTTTTTTTTTTATACCGACTCCATGGGAAATTAGGAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTTTTTTTTTTTATACCGACTCCATGGGAAATTAGGAGTCT  50

seq1  AGAAAGACTATTTTAATGGTCCCCTTCTCTTTTATACCTATACAGGAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTATTTTAATGGTCCCCTTCTCTTTTATACCTATACAGGAAGT  100

seq1  GCTTAAAGTAGTTAAGGAACATTTTCTTACTTCTCAAATGTCTCAAGTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAAGTAGTTAAGGAACATTTTCTTACTTCTCAAATGTCTCAAGTGG  150

seq1  TCATACTATAAAGAAGATGGGCAGGCAGGACTTCCAGTGGAAGGAGGGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATACTATAAAGAAGATGGGCAGGCAGGACTTCCAGTGGAAGGAGGGGG  200

seq1  ACATCGACACACCCACAAAACCTTCAACCTAAAATTTGTCTTGCTTGCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGACACACCCACAAAACCTTCAACCTAAAATTTGTCTTGCTTGCAA  250

seq1  GATGTACAGAAATAAAGATGAAGCAGAGACTGAAGGGATGGCCAACCAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTACAGAAATAAAGATGAAGCAGAGACTGAAGGGATGGCCAACCAAT  300

seq1  GACTGGCCCAACTTGAGACCCATCCCAAGGCAGAGAGCCAACCCCTGAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGGCCCAACTTGAGACCCATCCCAAGGCAGAGAGCCAACCCCTGAAG  350

seq1  TGGGGCGTGGCCCAATGTTGCTAGTATTATAATGTTAATTTTGGTCCCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCGTGGCCCAATGTTGCTAGTATTATAATGTTAATTTTGGTCCCCA  400

seq1  AAACTGCTTAGTCTGCATGTAAGACACTGAGGGACTCTGCCCCCAGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCTTAGTCTGCATGTAAGACACTGAGGGACTCTGCCCCCAGTTGG  450

seq1  TTCTGATTGGTAAATAAAGATGCCAGCAGCCAATGATTGGGCAGGGCATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATTGGTAAATAAAGATGCCAGCAGCCAATGATTGGGCAGGGCATA  500

seq1  CAGAGGCAGGACTTTTTGGATTCTTGGGCTTGAGACAGAGAGGAAGGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGGACTTTTTGGATTCTTGGGCTTGAGACAGAGAGGAAGGAGG  550

seq1  AAGAAGATCCACCATGCTGGGATAAGGAGAAGAGGAGAGACACCATGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATCCACCATGCTGGGATAAGGAGAAGAGGAGAGACACCATGCCT  600

seq1  GAGAAAAGTGGGTCACAGGGAGGCATAGCCAGCATGTGAAGGCGCTGGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTGGGTCACAGGGAGGCATAGCCAGCATGTGAAGGCGCTGGGA  650

seq1  GAGTGTGGCCCAGTTGG  667
      |||||||||||||||||
seq2  GAGTGTGGCCCAGTTGG  667