BAC Information

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BAC

Clone NameB6Ng01-258K02
Chromosome8 (Build37)
Map Location 91,769,132 - 91,854,662
singlet/doubletdoublet
Overlap genenone
Upstream genePapd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985, Sall1, LOC100041089, EG625801, EG384862
Downstream geneTox3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258K02.bB6Ng01-258K02.g
ACCGA064022GA064023
length1,0781,052
definitionB6Ng01-258K02.b B6Ng01-258K02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,769,132 - 91,770,251)(91,853,615 - 91,854,662)
sequence
gaattccacagctccgctccgagcttgttcataatttgttccattgttcc
tccactttgctgcacgtaggagatatgtaagactcccgccggctctgaga
ccgctgtggctgctgggcacaatgggggagagcagaggctgctttgtggt
cctagcctgaagtctccctgcctttgtgactgccgcagggatgcttcgga
ggcctcggcttgcctttgtgagcgcaattaaaccccggaagaggaaggtg
aacagggagctgtccctgcaccgctgttcttccgcgggtgtcacttagct
gggtattgatggcacacggatgtcccagtcctcagaagggcctgtagtag
ggggtccctgcagcaggagaacctctgagacctcccacactcaggccgac
gggagcattctgctttatgtccaaagaatgagtactcttgaatcctaagc
gaagaggcttataaggcggccgatcggtctttcactaagttacggttaaa
tagaagttggaaggtcccatgttcgagggcaaagtaggactcctctgtat
catgataatgcttgtgcacttcaaagaacaagaaggactcaatatgcctt
ccaagtaaaggaaatgatgatgtttgaggagacttgatcttcacattaca
caatatattcttgtgccacaaagcatgtgaaccctcacaaatatgcacac
atttgacattgttatatacccataaaataaatgtaaataaataaacatca
caaacaaacatctttaaaacctagaagctgagcatggtgtctcactcctg
caatgccatccctgtagaggcaggaggcagaggcaggagcagaggcagga
ggcaggaggcaggagcagagcagaggcagagcagaggcagaggcagagca
gagcagaggcagagcagaggcagagcagaggcagaagcagagcagaagca
gagcagagcaggagcaggagcagagcaggagcagagcagaggcaggagca
agagcagagcaggagcaggaggcataggattatgctttaggattacaaag
ctagtcagtcacctattggagcttggaa
gaattctactcccaagtccaaaccttttgacctatttcaggccacccagc
aaattaatccataggaagatttgagggggcactgcttggaatggtggctt
cccatccgcatttgcaatcaaaacattgaagatgcttggggcagtccaaa
gggactgagttagtgggacacttcagggtgaggccatctaagagattgac
atctcagtataaaacacctcatatgtgctaaccaaaaatggcattagagt
gatcccaagggagaagaagactaacactctctgctaagtgagtagaaaaa
tatatgcagatatgttcttaatatatgtcataactctgtgagtttattgg
agtcttgcaaacatgcctgttgttgggacatgcgtttcctcctctctcct
ttccagaggattaaaactgacagtgctaattaaagatggaaagaaaagag
accactgtcagacgggaagcataggcctgaattacaatgaggcccaaagg
aggagaatatggggaggcctcatcattaggggtttccttctaagtgccag
gaagctccctgcagatgaatcctgttctaaaaggggagtatttaaccaaa
attcccacctcggaactactactccagaagaatctagaggaaaggttcta
gaatcggtgccactaactcaatgcacttaaccctagcacctccatcttgt
ggccttacctagctagaatggaaggaaggaaggggtttggatgaggctgg
gaaggccctctgtagtgtccccacgttgtgactgagtgctctgttctttc
tgtgttctctgccttccgctatagatgcacagactgcctagctgcagcag
accctcgtgatgagaaccctaagagtgtgtgtgtgtttaggaagacaaat
catttttgctgtttgttattatcttccatcgacactgatggaaggcaggt
catgggaacagaaggatctttttgtttgctgaggacaaaacagaatttct
atccttaacacttgaagtagtattagggcagaaaggcagtagaaactagg
cc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91769132_91770251
seq2: B6Ng01-258K02.b_44_1121

seq1  GAATTCCACAGCTCCGCTCCGAGCTTGTTCATAATTTGTTCCATTGTTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGCTCCGCTCCGAGCTTGTTCATAATTTGTTCCATTGTTCC  50

seq1  TCCACTTTGCTGCACGTAGGAGATATGTAAGACTCCCGCCGGCTCTGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTGCTGCACGTAGGAGATATGTAAGACTCCCGCCGGCTCTGAGA  100

seq1  CCGCTGTGGCTGCTGGGCACAATGGGGGAGAGCAGAGGCTGCTTTGTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCTGTGGCTGCTGGGCACAATGGGGGAGAGCAGAGGCTGCTTTGTGGT  150

seq1  CCTAGCCTGAAGTCTCCCTGCCTTTGTGACTGCCGCAGGGATGCTTCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGCCTGAAGTCTCCCTGCCTTTGTGACTGCCGCAGGGATGCTTCGGA  200

seq1  GGCCTCGGCTTGCCTTTGTGAGCGCAATTAAACCCCGGAAGAGGAAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCGGCTTGCCTTTGTGAGCGCAATTAAACCCCGGAAGAGGAAGGTG  250

seq1  AACAGGGAGCTGTCCCTGCACCGCTGTTCTTCCGCGGGTGTCACTTAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGAGCTGTCCCTGCACCGCTGTTCTTCCGCGGGTGTCACTTAGCT  300

seq1  GGGTATTGATGGCACACGGATGTCCCAGTCCTCAGAAGGGCCTGTAGTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTATTGATGGCACACGGATGTCCCAGTCCTCAGAAGGGCCTGTAGTAG  350

seq1  GGGGTCCCTGCAGCAGGAGAACCTCTGAGACCTCCCACACTCAGGCCGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCCCTGCAGCAGGAGAACCTCTGAGACCTCCCACACTCAGGCCGAC  400

seq1  GGGAGCATTCTGCTTTATGTCCAAAGAATGAGTACTCTTGAATCCTAAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCATTCTGCTTTATGTCCAAAGAATGAGTACTCTTGAATCCTAAGC  450

seq1  GAAGAGGCTTATAAGGCGGCCGATCGGTCTTTCACTAAGTTACGGTTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGCTTATAAGGCGGCCGATCGGTCTTTCACTAAGTTACGGTTAAA  500

seq1  TAGAAGTTGGAAGGTCCCATGTTCGAGGGCAAAGTAGGACTCCTCTGTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTGGAAGGTCCCATGTTCGAGGGCAAAGTAGGACTCCTCTGTAT  550

seq1  CATGATAATGCTTGTGCACTTCAAAGAACAAGAAGGACTCAATATGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAATGCTTGTGCACTTCAAAGAACAAGAAGGACTCAATATGCCTT  600

seq1  CCAAGTAAAGGAAATGATGATGTTTGAGGAGACTTGATCTTCACATTACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTAAAGGAAATGATGATGTTTGAGGAGACTTGATCTTCACATTACA  650

seq1  CAATATATTCTTGTGCCACAAAGCATGTGAACCCTCACAAATATGCACAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATATTCTTGTGCCACAAAGCATGTGAACCCTCACAAATATGCACAC  700

seq1  ATTTGACATTGTTATATACCCATAAAATAAATGTAAATAAATAAACATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACATTGTTATATACCCATAAAATAAATGTAAATAAATAAACATCA  750

seq1  CAAACAAACATCTTTAAAACCTAGAAGCTGAGCATGGTGTCTCACTCCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAAACATCTTTAAAACCTAGAAGCTGAGCATGGTGTCTCACTCCTG  800

seq1  CAATGCCATCCCTGTAGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCA  850
      ||||||||||||||||||||||||||||| ||||||||| ||| ||||||
seq2  CAATGCCATCCCTGTAGAGGCAGGAGGCA-GAGGCAGGA-GCA-GAGGCA  847

seq1  GGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAG  900
      ||||||||||||||||| ||||   ||| |||||||   ||| |||||| 
seq2  GGAGGCAGGAGGCAGGA-GCAG--AGCA-GAGGCAG--AGCA-GAGGCA-  889

seq1  GAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGG  950
      |||||||   ||||   ||| |||||||   ||| |||||||   ||| |
seq2  GAGGCAG--AGCAG--AGCA-GAGGCAG--AGCA-GAGGCAG--AGCA-G  928

seq1  AGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGA  1000
      ||||| || ||||   ||| || ||||   ||||   |||||| ||||||
seq2  AGGCA-GAAGCAG--AGCA-GAAGCAG--AGCAG--AGCAGGA-GCAGGA  969

seq1  GGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAGGCAGGAG  1050
       ||||   |||||| ||||   ||| ||||||||| ||| || ||||   
seq2  -GCAG--AGCAGGA-GCAG--AGCA-GAGGCAGGA-GCAAGA-GCAG--A  1008

seq1  GCAGGAGGCAGGAGGCAGAGGGATATATGCTTTAGGA-TAC-AAGCTAGT  1098
      |||||| |||||||||| | |||| |||||||||||| ||| ||||||||
seq2  GCAGGA-GCAGGAGGCATA-GGAT-TATGCTTTAGGATTACAAAGCTAGT  1055

seq1  CAGGCA-CTATTGGGGGTTGGAA  1120
      ||| || ||||||| | ||||||
seq2  CAGTCACCTATTGGAGCTTGGAA  1078

seq1: chr8_91853615_91854662
seq2: B6Ng01-258K02.g_67_1118 (reverse)

seq1  GGCCTAGTTTCTACTGCC-TTCTGCCCCTTAATACTACTTCAAGTG-TAA  48
      |||||||||||||||||| ||||||||  ||||||||||||||||| |||
seq2  GGCCTAGTTTCTACTGCCTTTCTGCCC--TAATACTACTTCAAGTGTTAA  48

seq1  GGATAGAAATTCTG-TTTGTCCTCAGCAAACAAAAAGATCCTTCTGTTCC  97
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GGATAGAAATTCTGTTTTGTCCTCAGCAAACAAAAAGATCCTTCTGTTCC  98

seq1  CATGACCTGCC-TCCATCAGTGTCGATGGAAGATAATAACAAACAGCAAA  146
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATGACCTGCCTTCCATCAGTGTCGATGGAAGATAATAACAAACAGCAAA  148

seq1  AATGATTTGTCTTCCTAAACACACACACACTCTTA-GGTTCTCATCACG-  194
      ||||||||||||||||||||||||||||||||||| ||||||||||||| 
seq2  AATGATTTGTCTTCCTAAACACACACACACTCTTAGGGTTCTCATCACGA  198

seq1  GGGTCTGCTGCAGCTAGGCAGTCTGTGCATCTATAGCGGAAGGCAGAGAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGCTGCAGCTAGGCAGTCTGTGCATCTATAGCGGAAGGCAGAGAA  248

seq1  CACAGAAAGAACAGAGCACTCAGTCACAACGTGGGGACACTACAGAGGGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGAACAGAGCACTCAGTCACAACGTGGGGACACTACAGAGGGC  298

seq1  CTTCCCAGCCTCATCCAAACCCCTTCCTTCCTTCCATTCTAGCTAGGTAA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGCCTCATCCAAACCCCTTCCTTCCTTCCATTCTAGCTAGGTAA  348

seq1  GGCCACAAGATGGAGGTGCTAGGGTTAAGTGCATTGAGTTAGTGGCACCG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACAAGATGGAGGTGCTAGGGTTAAGTGCATTGAGTTAGTGGCACCG  398

seq1  ATTCTAGAACCTTTCCTCTAGATTCTTCTGGAGTAGTAGTTCCGAGGTGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAGAACCTTTCCTCTAGATTCTTCTGGAGTAGTAGTTCCGAGGTGG  448

seq1  GAATTTTGGTTAAATACTCCCCTTTTAGAACAGGATTCATCTGCAGGGAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTTGGTTAAATACTCCCCTTTTAGAACAGGATTCATCTGCAGGGAG  498

seq1  CTTCCTGGCACTTAGAAGGAAACCCCTAATGATGAGGCCTCCCCATATTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGCACTTAGAAGGAAACCCCTAATGATGAGGCCTCCCCATATTC  548

seq1  TCCTCCTTTGGGCCTCATTGTAATTCAGGCCTATGCTTCCCGTCTGACAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTTTGGGCCTCATTGTAATTCAGGCCTATGCTTCCCGTCTGACAG  598

seq1  TGGTCTCTTTTCTTTCCATCTTTAATTAGCACTGTCAGTTTTAATCCTCT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCTCTTTTCTTTCCATCTTTAATTAGCACTGTCAGTTTTAATCCTCT  648

seq1  GGAAAGGAGAGAGGAGGAAACGCATGTCCCAACAACAGGCATGTTTGCAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGAGAGAGGAGGAAACGCATGTCCCAACAACAGGCATGTTTGCAA  698

seq1  GACTCCAATAAACTCACAGAGTTATGACATATATTAAGAACATATCTGCA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAATAAACTCACAGAGTTATGACATATATTAAGAACATATCTGCA  748

seq1  TATATTTTTCTACTCACTTAGCAGAGAGTGTTAGTCTTCTTCTCCCTTGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTTCTACTCACTTAGCAGAGAGTGTTAGTCTTCTTCTCCCTTGG  798

seq1  GATCACTCTAATGCCATTTTTGGTTAGCACATATGAGGTGTTTTATACTG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCACTCTAATGCCATTTTTGGTTAGCACATATGAGGTGTTTTATACTG  848

seq1  AGATGTCAATCTCTTAGATGGCCTCACCCTGAAGTGTCCCACTAACTCAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCAATCTCTTAGATGGCCTCACCCTGAAGTGTCCCACTAACTCAG  898

seq1  TCCCTTTGGACTGCCCCAAGCATCTTCAATGTTTTGATTGCAAATGCGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGGACTGCCCCAAGCATCTTCAATGTTTTGATTGCAAATGCGGA  948

seq1  TGGGAAGCCACCATTCCAAGCAGTGCCCCCTCAAATCTTCCTATGGATTA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGCCACCATTCCAAGCAGTGCCCCCTCAAATCTTCCTATGGATTA  998

seq1  ATTTGCTGGGTGGCCTGAAATAGGTCAAAAGGTTTGGACTTGGGAGTAGA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGGGTGGCCTGAAATAGGTCAAAAGGTTTGGACTTGGGAGTAGA  1048

seq1  ATTC  1048
      ||||
seq2  ATTC  1052