BAC Information

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BAC

Clone NameB6Ng01-259I16
Chromosome8 (Build37)
Map Location 65,102,050 - 65,232,099
singlet/doubletdoublet
Overlap genenone
Upstream genePalld, LOC100040872, BC013672, Anxa10, LOC100040775, LOC384830, LOC100040804, LOC665267
Downstream geneSpock3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259I16.bB6Ng01-259I16.g
ACCGA064695GA064696
length1,0941,173
definitionB6Ng01-259I16.b B6Ng01-259I16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,231,004 - 65,232,099)(65,102,050 - 65,102,615)
sequence
gaattcttgcttcatctagtcacactcaattgaacagagaagcctgtgat
cattaaagtccctgctttctactgacagtttcgtggaagctgtccagagc
cactcagtgcttgaatttcatattcccttgaaattgaggctgcatactgg
gcagtactgtgaccttttctgtgagtttttcgctccctccctctgcagtt
tgaaaggtgtaggcacatcagagaaatctcactaaggatagtcgaatgat
aaaatgtgataggaaaggtcacactcataccaggtttcaatttaattcag
acacagctcactactctgggaactgttaaatatttagtatacagagatta
ccaataccgattttttttttaatttccttttgtgaacctggaggtctaac
cctgagagcttcacatggttgcatgctagacaggcctgcagttgtgctgc
ctcccagtacaggaattatactttttctttgtagttactgaaaaagatct
ccgttgaatatttaagtgactcttattccagaaaatgtaaattagtgggt
tttgtttaagttttggaaggactgacttgcataacagatttaagatacaa
gccaaccattcgttctgaattgatttcaaattgtgattcagcttagctat
ataaaactgcatgtttccttctaattgttttgtagtttaggaccctcagt
atttttcaagttgtttgtttgttaccatttctaatgtttgaacaaaggac
agtggtgctttctccttccatctgttcttactctagaataacatgctcag
agacaggatagctcttactaaagaagattacattcctttctttcataatt
tggcttaattgaacttgcaaagggaattaagcttattctagactatgatt
tctttgtttctgcactagatcctagagctaaggaagaaccctagattgtg
cttgttactggaagatatttaagagactttaggaagtccaaacacctatc
cttcttttacttagtgtaatttatttatatattattttctctactatcta
aacagatgcatgcattgcacatgtttgtctgcatcaaggaataa

gaattctcttttgttatttatctaggggtggggcaccatgagattttttt
ccttccatgttagcatgtctattgatcttgccattattcatgtcttgctt
gtgcagcttagagaagtgaatacacagaaggcgtcttaatattttgcttg
ttaaaatatttccatggccttttctgttttgtttcctaaaaggcagatat
aggagctatgctgaggatgtatttactgaggcttggatgatggagcatga
cagtaggatttgctgaaggaggcagaggtaggaggatcatgttccaggcc
atcctaggatccccactgtctgttcatctctgtgtccattgtgtccagtt
gtgtttttctgtggagtgaagcttccctgatgaaggaacatagctctatg
gccatagctatatagaccatgtataagaggttaagattaaaaatggagct
cagaagtgctactggactagcaaaatggtgataatagaatattctgttct
aaggtccatgacatatctagccctgggtatgtggtgaggttcctagcaat
gaacatggtttcactcccgttcagtggtccttaagtctacttaggtcacc
actgacatttgattgatatttattgcagtttaatagttatcttgccgtgc
tggtcactttcatagtttataggcatcatagcttggtgggactgttatca
ctttcctcccttgactgcttgcagagtgcttttcattcttcttcacagct
gaatgctgctgtcccattgcatgcttgaaccccattctcatcaccattta
agttgttatcatttcctagctactgtgaaatagggcatcaataaacatgg
ctgtgcaagttgtctgtagagggagaatgccacacaataagacatatctt
taagttttttaacaagtcaaatgcagatttctgttgtgggctacatcatt
ttttcattttccaacaacagccgtcttcttttctgttacaacctcatcct
gcatttgctgtcagtagtttttgttgtttctcccaatctttaaggtgtga
aaacaaaatctaattatcttctgcttgactttatgattgtgatcagaaga
aaaataaagtaaaaatctacttcaactgtcaggcctgctatgttgctgcg
ttgtccattctgatggcctgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_65231004_65232099
seq2: B6Ng01-259I16.b_47_1140 (reverse)

seq1  TTATTTCTTGATGCAGACAAACATGTGCAAATGCATGCATCTGTTTAGAT  50
      ||||| |||||||||||||||||||||| |||||||||||||||||||||
seq2  TTATTCCTTGATGCAGACAAACATGTGC-AATGCATGCATCTGTTTAGAT  49

seq1  AGTAGAAGAAAATAATTATATAAATAAATTACACTAAGTAAAAGAAGGAT  100
      ||||| ||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGTAG-AGAAAATAA-TATATAAATAAATTACACTAAGTAAAAGAAGGAT  97

seq1  AGGTGTTTGGACTTCCTAAAGTCTCTTAAATATCTTTCCAGTAACAAGCA  150
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGGTGTTTGGACTTCCTAAAGTCTCTTAAATATC-TTCCAGTAACAAGCA  146

seq1  CAATCTA-GGTTCTTCCTTAGCTCTAGGATCTAGTGCAGAAACAAAGAAA  199
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTAGGGTTCTTCCTTAGCTCTAGGATCTAGTGCAGAAACAAAGAAA  196

seq1  TCATAGTCTAGAATAAGCTTAATT-CCTTTGCAAGTTCAATTAAGCCAAA  248
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCATAGTCTAGAATAAGCTTAATTCCCTTTGCAAGTTCAATTAAGCCAAA  246

seq1  TTATGAAAGAAAGGAATGTAATCTTCTTTAGTAAGAGCTATCCTGTCTCT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAAAGAAAGGAATGTAATCTTCTTTAGTAAGAGCTATCCTGTCTCT  296

seq1  GAGCATGTTATTCTAGAGTAAGAACAGATGGAAGGAGAAAGCACCACTGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGTTATTCTAGAGTAAGAACAGATGGAAGGAGAAAGCACCACTGT  346

seq1  CCTTTGTTCAAACATTAGAAATGGTAACAAACAAACAACTTGAAAAATAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTTCAAACATTAGAAATGGTAACAAACAAACAACTTGAAAAATAC  396

seq1  TGAGGGTCCTAAACTACAAAACAATTAGAAGGAAACATGCAGTTTTATAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGTCCTAAACTACAAAACAATTAGAAGGAAACATGCAGTTTTATAT  446

seq1  AGCTAAGCTGAATCACAATTTGAAATCAATTCAGAACGAATGGTTGGCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGCTGAATCACAATTTGAAATCAATTCAGAACGAATGGTTGGCTT  496

seq1  GTATCTTAAATCTGTTATGCAAGTCAGTCCTTCCAAAACTTAAACAAAAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTTAAATCTGTTATGCAAGTCAGTCCTTCCAAAACTTAAACAAAAC  546

seq1  CCACTAATTTACATTTTCTGGAATAAGAGTCACTTAAATATTCAACGGAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTAATTTACATTTTCTGGAATAAGAGTCACTTAAATATTCAACGGAG  596

seq1  ATCTTTTTCAGTAACTACAAAGAAAAAGTATAATTCCTGTACTGGGAGGC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTTCAGTAACTACAAAGAAAAAGTATAATTCCTGTACTGGGAGGC  646

seq1  AGCACAACTGCAGGCCTGTCTAGCATGCAACCATGTGAAGCTCTCAGGGT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAACTGCAGGCCTGTCTAGCATGCAACCATGTGAAGCTCTCAGGGT  696

seq1  TAGACCTCCAGGTTCACAAAAGGAAATTAAAAAAAAAATCGGTATTGGTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCTCCAGGTTCACAAAAGGAAATTAAAAAAAAAATCGGTATTGGTA  746

seq1  ATCTCTGTATACTAAATATTTAACAGTTCCCAGAGTAGTGAGCTGTGTCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGTATACTAAATATTTAACAGTTCCCAGAGTAGTGAGCTGTGTCT  796

seq1  GAATTAAATTGAAACCTGGTATGAGTGTGACCTTTCCTATCACATTTTAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAAATTGAAACCTGGTATGAGTGTGACCTTTCCTATCACATTTTAT  846

seq1  CATTCGACTATCCTTAGTGAGATTTCTCTGATGTGCCTACACCTTTCAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCGACTATCCTTAGTGAGATTTCTCTGATGTGCCTACACCTTTCAAA  896

seq1  CTGCAGAGGGAGGGAGCGAAAAACTCACAGAAAAGGTCACAGTACTGCCC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCAGAGGGAGGGAGCGAAAAACTCACAGAAAAGGTCACAGTACTGCCC  946

seq1  AGTATGCAGCCTCAATTTCAAGGGAATATGAAATTCAAGCACTGAGTGGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCAGCCTCAATTTCAAGGGAATATGAAATTCAAGCACTGAGTGGC  996

seq1  TCTGGACAGCTTCCACGAAACTGTCAGTAGAAAGCAGGGACTTTAATGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGACAGCTTCCACGAAACTGTCAGTAGAAAGCAGGGACTTTAATGAT  1046

seq1  CACAGGCTTCTCTGTTCAATTGAGTGTGACTAGATGAAGCAAGAATTC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTTCTCTGTTCAATTGAGTGTGACTAGATGAAGCAAGAATTC  1094


seq1: chr8_65102050_65102615
seq2: B6Ng01-259I16.g_646_1237

seq1  TAAGTCTACTTAGGTCACCACTGACATTTGATTGATATTTATTGCAGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTACTTAGGTCACCACTGACATTTGATTGATATTTATTGCAGTTT  50

seq1  AATAGTTATCTTGCCGTGCTGGTCACTTTCATAGTTTATAGGCATCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTATCTTGCCGTGCTGGTCACTTTCATAGTTTATAGGCATCATAG  100

seq1  CTTGGTGGGACTGTTATCACTTTCCTCCCTTGACTGCTTGCAGAGTGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTGGGACTGTTATCACTTTCCTCCCTTGACTGCTTGCAGAGTGCTT  150

seq1  TTCATTCTTCTTCACAGCTGAATGCTGCTGTCCCATTGCATGCTTGAACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCTTCTTCACAGCTGAATGCTGCTGTCCCATTGCATGCTTGAACC  200

seq1  CCATTCTCATCACCATTTAAGTTGTTATCATTTCCTAGCTACTGTG-AAT  249
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCATTCTCATCACCATTTAAGTTGTTATCATTTCCTAGCTACTGTGAAAT  250

seq1  AGGGCATCAATAAACATGGCTGTGCAAG-TGTCTGTAGA-GGAGAATGCC  297
      |||||||||||||||||||||||||||| |||||||||| ||||||||||
seq2  AGGGCATCAATAAACATGGCTGTGCAAGTTGTCTGTAGAGGGAGAATGCC  300

seq1  ACACAAT-AGACATATCTTCA--GTTTTTAACAAGTCAAATGCAGATTTC  344
      ||||||| ||||||||||| |   ||||||||||||||||||||||||||
seq2  ACACAATAAGACATATCTTTAAGTTTTTTAACAAGTCAAATGCAGATTTC  350

seq1  TGTTGT-GGCTACATCA-TTTTTCA-TTTCCAACAACAGCGGTC-TCTTT  390
      |||||| |||||||||| ||||||| |||||||||||||| ||| |||||
seq2  TGTTGTGGGCTACATCATTTTTTCATTTTCCAACAACAGCCGTCTTCTTT  400

seq1  TCTG-TACAACCTCATCCTGCATTTGCTGTCAGTAG-TTTTGTTG-TTCT  437
      |||| ||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TCTGTTACAACCTCATCCTGCATTTGCTGTCAGTAGTTTTTGTTGTTTCT  450

seq1  CCC-ATC-TTAAGGTGTTGAGACAAAATC-AATTATC-TCTGC-TGAC-T  481
      ||| ||| |||||||||  | |||||||| ||||||| ||||| |||| |
seq2  CCCAATCTTTAAGGTGTGAAAACAAAATCTAATTATCTTCTGCTTGACTT  500

seq1  TATGATTGTGATCAGA--GAAAATAAAGAAAATAT-TAC-TCAACTGTCA  527
      ||||||||||||||||   ||||||||| ||| || ||| ||||||||||
seq2  TATGATTGTGATCAGAAGAAAAATAAAGTAAAAATCTACTTCAACTGTCA  550

seq1  GG-CTG-TATGTTGTTTGTGTTGT-CATTCTGATGG-CTGTGA  566
      || ||| |||||||  || ||||| ||||||||||| ||||||
seq2  GGCCTGCTATGTTG-CTGCGTTGTCCATTCTGATGGCCTGTGA  592


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