BAC Information

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BAC

Clone NameB6Ng01-260B09
Chromosome8 (Build37)
Map Location 43,323,535 - 43,453,457
singlet/doubletdoublet
Overlap geneEG620772
Upstream genePcm1, Asah1, Frg1, LOC100039376, Gm1815, LOC671994, Zfp353
Downstream geneLOC628212, Triml1, LOC622082, EG622117, LOC100039417, Zfp42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260B09.bB6Ng01-260B09.g
ACCGA065098GA065099
length954407
definitionB6Ng01-260B09.b B6Ng01-260B09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(43,452,916 - 43,453,457)(43,323,535 - 43,323,947)
sequence
gaattcacttgacaggatctccctataatatctagtgtgacatcatatat
cttaacagcaatttatcttgactaaatattaatatgtgaagttttgccca
atgctatttagtgggttcacaactgacccacttctgaatgagtctgccac
acctagaatgttagataagagcagtttagtaattctaagtttttgcaata
tgttttcaattggaaaactatgatgtatattatgatcaggttcccttctt
ctacttcttccaaattgctttcagctcccaccagtccaaatccacacctt
atctttttctctttctttagaaagctaacagggaagtaaaaaaatcaaac
aaactggaataacaaattaaaaaccaaacaaacaaaaacaatgagaaata
tacacagagaaagacacatgcatatgcacacacatgtatgtgaacaaata
cacacacacatacacacccacacataaacacactaaaatcattacaagat
ttaaaaaaaacataatatataggaaaaaaattagtaggatgaaaaaatgt
ccaaacataggtatataaaaatatatatatatatatataaaataaacgcc
attgagttcattttatgttggctatttatttttattaatggacatgaggt
ctattaacctgtttgtttgtttgtttgtttgtttaacttctatacttaac
tgtcgagttgtccacaatactcttaatgtgtataagtatttcagacaatt
tctggcttggttcaaggatcactaaaacctgatgaagatcgcacccaatg
ttccaaaagcttttttcctttctactatgtgttttgaaagaaactagttg
ctctaagtatttctcaagtttatcccacttagctgtataagagggtttgc
aaccccacaggaagaacaacaatttccagactggactcccccagagctcc
cagg

cttttatgcccacaacactcttactttatttctagtgagagttctttcca
gccaaagtcaccagggacatatttggagttgcatgggtataggttgtact
tgtccctgggagaggctgtgcatcccaggagaactgaggtttctcaatga
aagggtcttagggctcccaatggaggagctagagaaagtacccaaggagc
taaagggatctgcaaccctaaaggtggaacaacattatgaactaaccagt
accccggagctcttgactctagctgcatatgtatcaaaagatggcctagt
cggccatcactggaaagagaggcccattggacacgcaaactttatatgcc
ccagtacaggggaacgccagggccaaaaaggggaagtgggagggtagggg
agtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_43452916_43453457
seq2: B6Ng01-260B09.b_43_584 (reverse)

seq1  TCATCCTACTAATTTTTTTCCTATATATTATGTTTTTTTTAAATCTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTACTAATTTTTTTCCTATATATTATGTTTTTTTTAAATCTTGTA  50

seq1  ATGATTTTAGTGTGTTTATGTGTGGGTGTGTATGTGTGTGTGTATTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTTAGTGTGTTTATGTGTGGGTGTGTATGTGTGTGTGTATTTGTT  100

seq1  CACATACATGTGTGTGCATATGCATGTGTCTTTCTCTGTGTATATTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACATGTGTGTGCATATGCATGTGTCTTTCTCTGTGTATATTTCTC  150

seq1  ATTGTTTTTGTTTGTTTGGTTTTTAATTTGTTATTCCAGTTTGTTTGATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTTGTTTGTTTGGTTTTTAATTTGTTATTCCAGTTTGTTTGATT  200

seq1  TTTTTACTTCCCTGTTAGCTTTCTAAAGAAAGAGAAAAAGATAAGGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACTTCCCTGTTAGCTTTCTAAAGAAAGAGAAAAAGATAAGGTGTG  250

seq1  GATTTGGACTGGTGGGAGCTGAAAGCAATTTGGAAGAAGTAGAAGAAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGGACTGGTGGGAGCTGAAAGCAATTTGGAAGAAGTAGAAGAAGGG  300

seq1  AACCTGATCATAATATACATCATAGTTTTCCAATTGAAAACATATTGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGATCATAATATACATCATAGTTTTCCAATTGAAAACATATTGCAA  350

seq1  AAACTTAGAATTACTAAACTGCTCTTATCTAACATTCTAGGTGTGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTAGAATTACTAAACTGCTCTTATCTAACATTCTAGGTGTGGCAGA  400

seq1  CTCATTCAGAAGTGGGTCAGTTGTGAACCCACTAAATAGCATTGGGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTCAGAAGTGGGTCAGTTGTGAACCCACTAAATAGCATTGGGCAAA  450

seq1  ACTTCACATATTAATATTTAGTCAAGATAAATTGCTGTTAAGATATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCACATATTAATATTTAGTCAAGATAAATTGCTGTTAAGATATATGA  500

seq1  TGTCACACTAGATATTATAGGGAGATCCTGTCAAGTGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACACTAGATATTATAGGGAGATCCTGTCAAGTGAATTC  542


seq1: chr8_43323535_43323947
seq2: B6Ng01-260B09.g_67_479

seq1  GAATTCCTTTTATGCCCACAACACTCTTACTTTATTTCTAGTGAGAGTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTATGCCCACAACACTCTTACTTTATTTCTAGTGAGAGTTC  50

seq1  TTTCCAGCCAAAGTCACCAGGGACATATTTGGAGTTGCATGGGTATAGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCCAAAGTCACCAGGGACATATTTGGAGTTGCATGGGTATAGGT  100

seq1  TGTACTTGTCCCTGGGAGAGGCTGTGCATCCCAGGAGAACTGAGGTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTGTCCCTGGGAGAGGCTGTGCATCCCAGGAGAACTGAGGTTTCT  150

seq1  CAATGAAAGGGTCTTAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAAAGGGTCTTAGGGCTCCCAATGGAGGAGCTAGAGAAAGTACCCA  200

seq1  AGGAGCTAAAGGGATCTGCAACCCTAAAGGTGGAACAACATTATGAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGCTAAAGGGATCTGCAACCCTAAAGGTGGAACAACATTATGAACTA  250

seq1  ACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTACCCCGGAGCTCTTGACTCTAGCTGCATATGTATCAAAAGATGG  300

seq1  CCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTA  350

seq1  TATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGAAGTGGGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCCAGTACAGGGGAACGCCAGGGCCAAAAAGGGGAAGTGGGAGGG  400

seq1  TAGGGGAGTGGGG  413
      |||||||||||||
seq2  TAGGGGAGTGGGG  413


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