BAC Information

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BAC

Clone NameB6Ng01-261K07
Chromosome4 (Build37)8 (Build37)
Map Location 82,993,370 - 82,993,87717,772,745 - 17,773,004
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneNfib, Zdhhc21, Cer1, Frem1, LOC667985, 1810054D07Rik
Downstream geneSnapc3, Psip1, LOC100040611, 4930473A06Rik, LOC668010, Bnc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261K07.bB6Ng01-261K07.g
ACCGA066259GA066260
length510951
definitionB6Ng01-261K07.b B6Ng01-261K07.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(82,993,370 - 82,993,877)(17,772,745 - 17,773,004)
sequence
gggaattcactcaagaaactctaagacattagttacatatttattgattg
tcagtaaatagcaagactgatgcaacaacatagaaaactgccattttctt
gaatcctatattttaaagatttatttatttagttcatgtatgtgagtaca
ctgtctctgtcttcagacataccagaagaggacattggatcccaattaca
gatggttgtgagccaccatgtggctgctggggattgaacccaggacctct
ggaagagcagtcagtgctcttaactgctgaatcatctctccacccagccc
ttgaatctctctctctctctctttggttttggttttctagacaggatttc
tttgtatagccctagctgtcctggaacttactctgtagaccaggctggcc
ttgaacttggaaatcctcctgcctctgcctcccaagtgctgggattaaag
gcatgcgccaccattgcccagccagctcttgaatcttttttttttggggg
ggggtgttga

gaattctccatagttaactctaagaggtaagattacagatacatagtctc
taccaatctatgaagagtcagccatagcttcggctgggtgggaggtggca
cacacccttaatcctgttaccagagaggcagagacagggagatctctgaa
tttgaggccggcctggtctactatagagctagttccaagacagccagggt
tacacagagaagccctgtctcaaaaaaacaaaaacagaaattaaaaatta
gaaaagaattatccatagctaacctttatgattctgtttaaatagtttac
ttaaggcaactgacagacaactccagtgttcaattttttttctctttttt
ttattaggtattttcctcgtttacatttccaatgctatcccaaaagtccc
ccatacccacccccccaatcccctacccacccactccccctttttggcac
tggcgttcccctgtactggggcatataaagtttgcaagtccaaagggcct
ctctttccagtgatggctgactaggccatcttttgatacatatgcagcta
gagtcaagagctccggggtactggttagttcatattgttgttctgaagaa
tagaaaattactggcctcttgtgaaaacatgaattttttacctcggagcc
caccccctcccatctagagattgttcccagaacactcctaaacttttcac
ctcaaaactcctcaccctaaagtttgaaccctcccaactaaaaactgttc
caagaacatttttgagataaaggcctcctgaaacaacctcaaatgaacca
ggtactccttagttacgtaggttccttgataggacatgactcccttagtt
acgtagattcctttggcagaactccctagtgatgtaaacttgtactttcc
ctgcccagttctccccctttgagtttttactatataagcctgttaaaaaa
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr4_82993370_82993877
seq2: B6Ng01-261K07.b_48_555

seq1  GAATTCACTCAAGAAACTCTAAGACATTAGTTACATATTTATTGATTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCAAGAAACTCTAAGACATTAGTTACATATTTATTGATTGTC  50

seq1  AGTAAATAGCAAGACTGATGCAACAACATAGAAAACTGCCATTTTCTTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAATAGCAAGACTGATGCAACAACATAGAAAACTGCCATTTTCTTGA  100

seq1  ATCCTATATTTTAAAGATTTATTTATTTAGTTCATGTATGTGAGTACACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATATTTTAAAGATTTATTTATTTAGTTCATGTATGTGAGTACACT  150

seq1  GTCTCTGTCTTCAGACATACCAGAAGAGGACATTGGATCCCAATTACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTTCAGACATACCAGAAGAGGACATTGGATCCCAATTACAGA  200

seq1  TGGTTGTGAGCCACCATGTGGCTGCTGGGGATTGAACCCAGGACCTCTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTGTGAGCCACCATGTGGCTGCTGGGGATTGAACCCAGGACCTCTGG  250

seq1  AAGAGCAGTCAGTGCTCTTAACTGCTGAATCATCTCTCCACCCAGCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGTCAGTGCTCTTAACTGCTGAATCATCTCTCCACCCAGCCCTT  300

seq1  GAATCTCTCTCTCTCTCTCTTTGGTTTTGGTTTTCTAGACAGGATTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTCTCTCTCTCTCTCTTTGGTTTTGGTTTTCTAGACAGGATTTCTT  350

seq1  TGTATAGCCCTAGCTGTCCTGGAACTTACTCTGTAGACCAGGCTGGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCCCTAGCTGTCCTGGAACTTACTCTGTAGACCAGGCTGGCCTT  400

seq1  GAACTTGGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGGAAATCCTCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGC  450

seq1  ATGCGCCACCATTGCCCAGCCAGCTCTTGAATCTTTTTTTTTTGGGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCCACCATTGCCCAGCCAGCTCTTGAATCTTTTTTTTTTGGGGGGG  500

seq1  GGTGTTGA  508
      ||||||||
seq2  GGTGTTGA  508


seq1: chr8_17772745_17773004
seq2: B6Ng01-261K07.g_399_658

seq1  --TTTTTTTTCCATTTTTTATTAGGTATTTAGCTCATTTACATTTCCAAT  48
        |||||| ||  |||||||||||||||||  ||| ||||||||||||||
seq2  TTTTTTTTCTCTTTTTTTTATTAGGTATTTTCCTCGTTTACATTTCCAAT  50

seq1  GCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTCCCCTGCCCACC  98
      ||||| ||||||||||||||||||||||  |||||| |||||| ||||||
seq2  GCTATCCCAAAAGTCCCCCATACCCACC--CCCCCAATCCCCTACCCACC  98

seq1  CACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGT  148
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CACTCCCCCTTTTTGGCACTGGCGTTCCCCTGTACTGGGGCATATAAAGT  148

seq1  TTGCAAGTCCAATGGGCCTCTCTTTCCAGTGATGGCCGACTAGGCCATCT  198
      |||||||||||| ||||||||||||||||||||||| |||||||||||||
seq2  TTGCAAGTCCAAAGGGCCTCTCTTTCCAGTGATGGCTGACTAGGCCATCT  198

seq1  TTTGATATATATGCAGCTAGACTCAAGAGCTCTGGGGTACTGGTTAGTTC  248
      ||||||| ||||||||||||| |||||||||| |||||||||||||||||
seq2  TTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTACTGGTTAGTTC  248

seq1  ATAATGTTGTTC  260
      ||| ||||||||
seq2  ATATTGTTGTTC  260


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