BAC Information

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BAC

Clone NameB6Ng01-261P17
Chromosome8 (Build37)
Map Location 129,488,206 - 129,632,707
singlet/doubletdoublet
Overlap geneRbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3
Upstream geneKcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2, Tomm20
Downstream geneEG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261P17.bB6Ng01-261P17.g
ACCGA066519GA066520
length371758
definitionB6Ng01-261P17.b B6Ng01-261P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,632,337 - 129,632,707)(129,488,206 - 129,488,963)
sequence
tctagaaacccatcaagatcttctttgtccacaggtgtctgtctgcatga
ccttcaggacataaataacctgtggtttcttggaaatgtctaaaggcaca
ccatctgtgtaaatcatgtagctcactaaatacaatatctcctgtaaagt
agccaggggtagtggctcacacctgtaattctagcccttgggaagccgaa
gaaggaacctgaggccatgctggactacaacagtgagaccctctctcaac
aacaaaatcttaaattattaaaactttgcaacatgctcattagtatcacg
tgacgtatacacagtaattgattttttaatgtgttggggtttttttgttt
tttggttttggttttgggttt
gaattccatagtcattagttcatctaattaattcatgaaagttcattttc
atgttgatctgcagaaaatgtgcccagtagggtagctaccactcatgaag
tagtcacaccaggctataggcagtgcgggtctcctggtgtccattcacac
caagtgagataaatgagaagtgtggcaatgacaagcatgagaaaggacat
cagtcgaaagaagcaaccctgggactaagtctctggggccctgcctcacc
agagctcactcactgcagccaagcaagtggatggctgtctctagggagct
cacttgcccattgccggtcttcttgcatggtgtccaccatcagcacccaa
atgatggctcacaatcatccactacttcacttccagaggatctgatgcct
tctgacctccataggcaccagttatatatgcagtgcacatacgtgtggag
aaaatattcacccacataaaacaaatctaaaaagtaggtttatttaatta
aagggtagtacatgatatctttacaaatgaaagactagggaataaaagtc
actgtgttttctaagaataaaaatataaacccatccttccaaagatgaac
aggatttgagcctgaggtttgcatagactaccaactacacccacatagaa
ggcaaaactcattcttccacatagcaaatattctttgaacctttactgtg
ttaggcatcctctcatgtgtgcaagacagaacagtaaaggagggagggag
ggagggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129632337_129632707
seq2: B6Ng01-261P17.b_50_420 (reverse)

seq1  AAACCCAAAACCAAAACCAAAAAACAAAAAAACCCCAACACATTAAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAAAACCAAAACCAAAAAACAAAAAAACCCCAACACATTAAAAAA  50

seq1  TCAATTACTGTGTATACGTCACGTGATACTAATGAGCATGTTGCAAAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTACTGTGTATACGTCACGTGATACTAATGAGCATGTTGCAAAGTT  100

seq1  TTAATAATTTAAGATTTTGTTGTTGAGAGAGGGTCTCACTGTTGTAGTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAATTTAAGATTTTGTTGTTGAGAGAGGGTCTCACTGTTGTAGTCC  150

seq1  AGCATGGCCTCAGGTTCCTTCTTCGGCTTCCCAAGGGCTAGAATTACAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGCCTCAGGTTCCTTCTTCGGCTTCCCAAGGGCTAGAATTACAGG  200

seq1  TGTGAGCCACTACCCCTGGCTACTTTACAGGAGATATTGTATTTAGTGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCCACTACCCCTGGCTACTTTACAGGAGATATTGTATTTAGTGAG  250

seq1  CTACATGATTTACACAGATGGTGTGCCTTTAGACATTTCCAAGAAACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGATTTACACAGATGGTGTGCCTTTAGACATTTCCAAGAAACCAC  300

seq1  AGGTTATTTATGTCCTGAAGGTCATGCAGACAGACACCTGTGGACAAAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATTTATGTCCTGAAGGTCATGCAGACAGACACCTGTGGACAAAGA  350

seq1  AGATCTTGATGGGTTTCTAGA  371
      |||||||||||||||||||||
seq2  AGATCTTGATGGGTTTCTAGA  371

seq1: chr8_129488206_129488963
seq2: B6Ng01-261P17.g_71_828

seq1  GAATTCCATAGTCATTAGTTCATCTAATTAATTCATGAAAGTTCATTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGTCATTAGTTCATCTAATTAATTCATGAAAGTTCATTTTC  50

seq1  ATGTTGATCTGCAGAAAATGTGCCCAGTAGGGTAGCTACCACTCATGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGATCTGCAGAAAATGTGCCCAGTAGGGTAGCTACCACTCATGAAG  100

seq1  TAGTCACACCAGGCTATAGGCAGTGCGGGTCTCCTGGTGTCCATTCACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCACACCAGGCTATAGGCAGTGCGGGTCTCCTGGTGTCCATTCACAC  150

seq1  CAAGTGAGATAAATGAGAAGTGTGGCAATGACAAGCATGAGAAAGGACAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGATAAATGAGAAGTGTGGCAATGACAAGCATGAGAAAGGACAT  200

seq1  CAGTCGAAAGAAGCAACCCTGGGACTAAGTCTCTGGGGCCCTGCCTCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCGAAAGAAGCAACCCTGGGACTAAGTCTCTGGGGCCCTGCCTCACC  250

seq1  AGAGCTCACTCACTGCAGCCAAGCAAGTGGATGGCTGTCTCTAGGGAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTCACTCACTGCAGCCAAGCAAGTGGATGGCTGTCTCTAGGGAGCT  300

seq1  CACTTGCCCATTGCCGGTCTTCTTGCATGGTGTCCACCATCAGCACCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGCCCATTGCCGGTCTTCTTGCATGGTGTCCACCATCAGCACCCAA  350

seq1  ATGATGGCTCACAATCATCCACTACTTCACTTCCAGAGGATCTGATGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGGCTCACAATCATCCACTACTTCACTTCCAGAGGATCTGATGCCT  400

seq1  TCTGACCTCCATAGGCACCAGTTATATATGCAGTGCACATACGTGTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACCTCCATAGGCACCAGTTATATATGCAGTGCACATACGTGTGGAG  450

seq1  AAAATATTCACCCACATAAAACAAATCTAAAAAGTAGGTTTATTTAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCACCCACATAAAACAAATCTAAAAAGTAGGTTTATTTAATTA  500

seq1  AAGGGTAGTACATGATATCTTTACAAATGAAAGACTAGGGAATAAAAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTAGTACATGATATCTTTACAAATGAAAGACTAGGGAATAAAAGTC  550

seq1  ACTGTGTTTTCTAAGAATAAAAATATAAACCCATCCTTCCAAAGATGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGTTTTCTAAGAATAAAAATATAAACCCATCCTTCCAAAGATGAAC  600

seq1  AGGATTTGAGCCTGAGGTTTGCATAGACTACCAACTACACCCACATAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGAGCCTGAGGTTTGCATAGACTACCAACTACACCCACATAGAA  650

seq1  GGCAAAACTCATTCTTCCACATAGCAAATATTCTTTGAACCTTTACTGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAACTCATTCTTCCACATAGCAAATATTCTTTGAACCTTTACTGTG  700

seq1  TTAGGCATCCTCTCATGTGTGCAAGACAGAACAGTAAAGGAGGGAGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGCATCCTCTCATGTGTGCAAGACAGAACAGTAAAGGAGGGAGGGAG  750

seq1  GGAGGGAG  758
      ||||||||
seq2  GGAGGGAG  758