BAC Information

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BAC

Clone NameB6Ng01-261P20
Chromosome8 (Build37)
Map Location 44,637,891 - 44,798,231
singlet/doubletdoublet
Overlap geneAdam26a, EG384813, Adam34, EG384814, LOC100039472
Upstream geneTriml1, LOC622082, EG622117, LOC100039417, Zfp42, Adam26b
Downstream geneLOC547011, LOC622263
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261P20.bB6Ng01-261P20.g
ACCGA066523GA066524
length1,2011,145
definitionB6Ng01-261P20.b B6Ng01-261P20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(44,797,032 - 44,798,231)(44,637,891 - 44,639,042)
sequence
gaattcctttgccttcacatttcttattttcttaaaaatataacttttta
aactctttatagaaatgaaaactgaagagataaagttattagctcctgag
ctgactctgatggagacaatatcttactacctcagtcatggtattgacta
tttctatgcccaagatcttgcacatttcttctggcttatgcaatttattg
ctgcataattatcccttatgatctgcagtgagcttttgtctttctgtggt
atctaatatattgccatttcccacccttttactaggtttaaattttctct
ttctctattacatttttacctggtctggagaacatttcattcatttttat
catttcagacccaccatatttttcagttatctttctaatattttcattta
aactcattattaactttacttggatatttagttttgtttcctctaacaat
tttgtgcttagtttgtatgtgacctaaagcattctaatatttatatgaag
tatgcctttctttatatgtacctgcttattttctactaaacgactttagt
agaagctagattataatacatcatgggatcaacctattttacttaaaata
cattgatatttttgccagccctatttggatttttctgagttcaacatatt
tgcttttaataggtcatcttgaagccccgagtttgttcctctctaactct
gccctgtagttttggacagaggatctctcattaaaccagatgctcaccat
ttctgctacagttgctgacaagcaaaccacggaatctgcttaccctcatt
cacttcgaagagctggtcttaaagacatctaccattcccactctcttctc
tgggttctggaaaccagaactgagttgctgattgcatggtaagcattttg
tccactagggtcttgccacattgcaagctctttttttttatattatccgt
acactatatgttactcatatattcccttacacaaaattctttcagattcc
tgacatgtgtaattcatatttttcttctgaaatgccaagccaacacttaa
ctccccacaagtacacatgtgtacaaacacacaaaccagtaagcttggaa
agcctatttcatatatttgcccactaatgctgagattgtctgatggaacc
tgatgtccgttcattctatgagaatacagaattttcctctctcaccccag
g

gaattcattaagattggacagaaattaatcagatggaaataacaacatca
aaaccgatgctttttttttgaaagtatatatacaaacaaagaaacccttg
gccacaataccagaatgagagtaaggagacatataaatggtattttaaaa
tgttataagtccgttaattattaacatgacctgaaccaaccccaaataat
tgagtgagagtttttatggatctttaaaattagttttagcccaattaatg
ggtgaattacctctaataaacttttcaatatgctagactgcttaattccc
taggtgtgctccacagttacttgctgttgagcctctccagagtgattatt
gctccaccagcctgtagtcagtgtccacttcttttgactacatgttcatg
atccatctagctccatggaggctttctcctatctctgtcttctgtcttag
taccttccttccttctcttctctttcttcctgatcctgatctgtgaccct
agcctagtaacaaaagccctgcccacatctattcttcccagcaattggct
gtagtctcttttatttaacagtagatttaaattagagaggaaggtttgta
caataatggctggagtacatgagaatttgctcatcttggcaaccagatct
tgaggttcataatttaccatttgaatacacagcagtagcagagcaatcct
caaccaagacatatattatttaatacttagatgaaaaagaagctcttaaa
acaatcatcaatataattcatgaattcctcaactcatatatgaacaatat
atcccaataacatgtacaatctaaagaaatggatgaatttgtggacacat
atgacttccctaaatgagacaaaatagttattgggatctatagtaagaag
tgggtttgaagcagtagttaaaacactaactctataaaagttgttgtcca
taattatcacacaatgttgtctcataagagagaaaatcaccctcattttt
ttgtgtgataagagaaagatagttcagaggttcctccccctgaactcttc
ttagaccatttcagtatagatcttatttctggatggagattccatcaagg
tacccaatctgttctaagaaccgaactgaatgttctatctgggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_44797032_44798231
seq2: B6Ng01-261P20.b_47_1242 (reverse)

seq1  CCTGG---GTGAGAGGAAAA-TCTGTATTCTTCAATAGAATGACACTGTA  46
      |||||   | |||||||||| ||||||||||   ||||||||| || | |
seq2  CCTGGGGTGAGAGAGGAAAATTCTGTATTCT--CATAGAATGA-AC-GGA  46

seq1  CATCA-GCTCCATTCCAGACAATACTCAGGCATAGGTGGGCA---ATATG  92
      ||||| | |||||  |||||||| |||| ||||  |||||||   |||||
seq2  CATCAGGTTCCAT--CAGACAAT-CTCA-GCATTAGTGGGCAAATATATG  92

seq1  AAATAGGCTTCTCAGGCTTACTTGGTTTGTGTGTTTGTACACATGTGTAC  142
      ||||||||||  || |||||| ||||||||||||||||||||||||||||
seq2  AAATAGGCTTTCCAAGCTTAC-TGGTTTGTGTGTTTGTACACATGTGTAC  141

seq1  TTGTGGGAGTTTAAGTGTTGGCTTTGGCATTTTCAGA--GAAAATATGAA  190
      |||||||   |||||||||||| |||||| |||||||   ||||||||||
seq2  TTGTGGGGAGTTAAGTGTTGGC-TTGGCA-TTTCAGAAGAAAAATATGAA  189

seq1  TTTACACATGTCAGGGAATCTGAAAGAATTTTGTGTAAGGGAATATATGA  240
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  -TTACACATGTCA-GGAATCTGAAAGAATTTTGTGTAAGGGAATATATGA  237

seq1  GTAACATATAGTGTACGGATAATATAAAAAAAAAAGAGCTTGCAATGTGG  290
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GTAACATATAGTGTACGGATAATAT-AAAAAAAAAGAGCTTGCAATGTGG  286

seq1  CAAGACCCTAGTGGACAAAATGCTTACCATGCAATCAGCAACTCAGTTCT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCCTAGTGGACAAAATGCTTACCATGCAATCAGCAACTCAGTTCT  336

seq1  GGTTTCCAGAACCCAGAGAAGAGAGTGGGAATGGTAGATGTCTTTAAGAC  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCCAGAACCCAGAGAAGAGAGTGGGAATGGTAGATGTCTTTAAGAC  386

seq1  CAGCTCTTCGAAGTGAATGAGGGTAAGCAGATTCCGTGGTTTGCTTGTCA  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCTTCGAAGTGAATGAGGGTAAGCAGATTCCGTGGTTTGCTTGTCA  436

seq1  GCAACTGTAGCAGAAATGGTGAGCATCTGGTTTAATGAGAGATCCTCTGT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACTGTAGCAGAAATGGTGAGCATCTGGTTTAATGAGAGATCCTCTGT  486

seq1  CCAAAACTACAGGGCAGAGTTAGAGAGGAACAAACTCGGGGCTTCAAGAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACTACAGGGCAGAGTTAGAGAGGAACAAACTCGGGGCTTCAAGAT  536

seq1  GACCTATTAAAAGCAAATATGTTGAACTCAGAAAAATCCAAATAGGGCTG  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTATTAAAAGCAAATATGTTGAACTCAGAAAAATCCAAATAGGGCTG  586

seq1  GCAAAAATATCAATGTATTTTAAGTAAAATAGGTTGATCCCATGATGTAT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAATATCAATGTATTTTAAGTAAAATAGGTTGATCCCATGATGTAT  636

seq1  TATAATCTAGCTTCTACTAAAGTCGTTTAGTAGAAAATAAGCAGGTACAT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCTAGCTTCTACTAAAGTCGTTTAGTAGAAAATAAGCAGGTACAT  686

seq1  ATAAAGAAAGGCATACTTCATATAAATATTAGAATGCTTTAGGTCACATA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAAAGGCATACTTCATATAAATATTAGAATGCTTTAGGTCACATA  736

seq1  CAAACTAAGCACAAAATTGTTAGAGGAAACAAAACTAAATATCCAAGTAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTAAGCACAAAATTGTTAGAGGAAACAAAACTAAATATCCAAGTAA  786

seq1  AGTTAATAATGAGTTTAAATGAAAATATTAGAAAGATAACTGAAAAATAT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAATAATGAGTTTAAATGAAAATATTAGAAAGATAACTGAAAAATAT  836

seq1  GGTGGGTCTGAAATGATAAAAATGAATGAAATGTTCTCCAGACCAGGTAA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGGTCTGAAATGATAAAAATGAATGAAATGTTCTCCAGACCAGGTAA  886

seq1  AAATGTAATAGAGAAAGAGAAAATTTAAACCTAGTAAAAGGGTGGGAAAT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAATAGAGAAAGAGAAAATTTAAACCTAGTAAAAGGGTGGGAAAT  936

seq1  GGCAATATATTAGATACCACAGAAAGACAAAAGCTCACTGCAGATCATAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATATATTAGATACCACAGAAAGACAAAAGCTCACTGCAGATCATAA  986

seq1  GGGATAATTATGCAGCAATAAATTGCATAAGCCAGAAGAAATGTGCAAGA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATAATTATGCAGCAATAAATTGCATAAGCCAGAAGAAATGTGCAAGA  1036

seq1  TCTTGGGCATAGAAATAGTCAATACCATGACTGAGGTAGTAAGATATTGT  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGCATAGAAATAGTCAATACCATGACTGAGGTAGTAAGATATTGT  1086

seq1  CTCCATCAGAGTCAGCTCAGGAGCTAATAACTTTATCTCTTCAGTTTTCA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCAGAGTCAGCTCAGGAGCTAATAACTTTATCTCTTCAGTTTTCA  1136

seq1  TTTCTATAAAGAGTTTAAAAAGTTATATTTTTAAGAAAATAAGAAATGTG  1190
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATAAAGAGTTTAAAAAGTTATATTTTTAAGAAAATAAGAAATGTG  1186

seq1  AAGGCAAAGG  1200
      ||||||||||
seq2  AAGGCAAAGG  1196


seq1: chr8_44637891_44639042
seq2: B6Ng01-261P20.g_64_1208

seq1  GAATTCATTAAGATTGGACAGAAATTAATCAGATGGAAATAACAACATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTAAGATTGGACAGAAATTAATCAGATGGAAATAACAACATCA  50

seq1  AAACCGATGCTTTTTTTTTGAAAGTATATATACAAACAAAGAAACCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGATGCTTTTTTTTTGAAAGTATATATACAAACAAAGAAACCCTTG  100

seq1  GCCACAATACCAGAATGAGAGTAAGGAGACATATAAATGGTATTTTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACAATACCAGAATGAGAGTAAGGAGACATATAAATGGTATTTTAAAA  150

seq1  TGTTATAAGTCCGTTAATTATTAACATGACCTGAACCAACCCCAAATAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATAAGTCCGTTAATTATTAACATGACCTGAACCAACCCCAAATAAT  200

seq1  TGAGTGAGAGTTTTTATGGATCTTTAAAATTAGTTTTAGCCCAATTAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAGAGTTTTTATGGATCTTTAAAATTAGTTTTAGCCCAATTAATG  250

seq1  GGTGAATTACCTCTAATAAACTTTTCAATATGCTAGACTGCTTAATTCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAATTACCTCTAATAAACTTTTCAATATGCTAGACTGCTTAATTCCC  300

seq1  TAGGTGTGCTCCACAGTTACTTGCTGTTGAGCCTCTCCAGAGTGATTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGTGCTCCACAGTTACTTGCTGTTGAGCCTCTCCAGAGTGATTATT  350

seq1  GCTCCACCAGCCTGTAGTCAGTGTCCACTTCTTTTGACTACATGTTCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCACCAGCCTGTAGTCAGTGTCCACTTCTTTTGACTACATGTTCATG  400

seq1  ATCCATCTAGCTCCATGGAGGCTTTCTCCTATCTCTGTCTTCTGTCTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCTAGCTCCATGGAGGCTTTCTCCTATCTCTGTCTTCTGTCTTAG  450

seq1  TACCTTCCTTCCTTCTCTTCTCTTTCTTCCTGATCCTGATCTGTGACCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTCCTTCCTTCTCTTCTCTTTCTTCCTGATCCTGATCTGTGACCCT  500

seq1  AGCCTAGTAACAAAAGCCCTGCCCACATCTATTCTTCCCAGCAATTGGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTAGTAACAAAAGCCCTGCCCACATCTATTCTTCCCAGCAATTGGCT  550

seq1  GTAGTCTCTTTTATTTAACAGTAGATTTAAATTAGAGAGGAAGGTTTGTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTCTCTTTTATTTAACAGTAGATTTAAATTAGAGAGGAAGGTTTGTA  600

seq1  CAATAATGGCTGGAGTACATGAGAATTTGCTCATCTTGGCAACCAGATCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAATGGCTGGAGTACATGAGAATTTGCTCATCTTGGCAACCAGATCT  650

seq1  TGAGGTTCATAATTTACCATTTGAATACACAGCAGTAGCAGAGCAATCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTCATAATTTACCATTTGAATACACAGCAGTAGCAGAGCAATCCT  700

seq1  CAACCAAGACATATATTATTTAATACTTAGATGAAAAAGAAGCTCTTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCAAGACATATATTATTTAATACTTAGATGAAAAAGAAGCTCTTAAA  750

seq1  ACAATCATCAATATAATTCATGAATTCCTCAACTCATATATGAACAATAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCATCAATATAATTCATGAATTCCTCAACTCATATATGAACAATAT  800

seq1  ATCCCAATAACATGTACAATCTAAAGAAATGGATGAATTTGTGGACACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAATAACATGTACAATCTAAAGAAATGGATGAATTTGTGGACACAT  850

seq1  ATGACTTCCCTAAATGAGACAAAATAGTTATTGGGATCTATAGTAAGAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTCCCTAAATGAGACAAAATAGTTATTGGGATCTATAGTAAGAAG  900

seq1  TGGGTTTGAAGCAGTAGTTAAAACACTAACTCTAATAAAAGTTG-TATCC  949
      ||||||||||||||||||||||||||||||||| |||||||||| | |||
seq2  TGGGTTTGAAGCAGTAGTTAAAACACTAACTCT-ATAAAAGTTGTTGTCC  949

seq1  ATAATT-TCACAAAGTGTT---CCATAAGAGGGAAAA-CA-CCACATATT  993
      |||||| ||||| | ||||    |||||||| ||||| || || ||| ||
seq2  ATAATTATCACACAATGTTGTCTCATAAGAGAGAAAATCACCCTCATTTT  999

seq1  T---TGTGAT-AGAGAAAGATAGTTCAGAGGTTCCTCCACCCTGAACTCT  1039
      |   |||||| ||||||||||||||||||||||||||| |||||||||||
seq2  TTTGTGTGATAAGAGAAAGATAGTTCAGAGGTTCCTCC-CCCTGAACTCT  1048

seq1  TCCTAAGACCATTTCAGGTTTAATTAGAATCTTATTTCCTTGATGGAGAA  1089
      | || ||||||||||||   ||  ||| ||||||||| || ||||||| |
seq2  T-CTTAGACCATTTCAG---TA--TAG-ATCTTATTT-CTGGATGGAG-A  1089

seq1  TCCCATGGAAAGTTACCCAATTCTGTTCTAAGAAACAGACATGGAAAATG  1139
      | ||||   ||| ||||||| ||||||||||| ||| ||  ||   ||||
seq2  TTCCAT--CAAGGTACCCAA-TCTGTTCTAAG-AACCGAACTG---AATG  1132

seq1  TTCTATCTGGGCT  1152
      |||||||||||||
seq2  TTCTATCTGGGCT  1145


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