BAC Information

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BAC

Clone NameB6Ng01-263K05
Chromosome8 (Build37)
Map Location 26,859,706 - 26,969,279
singlet/doubletdoublet
Overlap geneBag4, Lsm1, Star, Ash2l, Kcnu1
Upstream geneAdam5, Adam32, Adam9, Tm2d2, Htra4, Plekha2, LOC100042390, Tacc1, LOC670822, LOC100040998, Fgfr1, D030041N04Rik, LOC100042416, Whsc1l1, Ppapdc1
Downstream geneHgsnat, 4930444A02Rik, Fnta, Hook3, 1700047A11Rik, Rnf170, Thap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263K05.bB6Ng01-263K05.g
ACCGA067753GA067754
length1,0291,037
definitionB6Ng01-263K05.b B6Ng01-263K05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,968,244 - 26,969,279)(26,859,706 - 26,860,757)
sequence
gaattcttaatttttaccccaggtgggtataccccacctcagcactagca
atggaggtggcaagatacagagtgtaatgatttctatatgcttggaccag
ggagtggcaggattagaaggtgtggccctgttggagtgggcctgtcagtg
tgggcatgggctttaagaccctcaccctagctgcctggaagtcagtactc
cactaagagccttcagatgaagatgtagaactctcagctctgcctgcacc
atgcctgcctggatgctgccatgctcccacctttatgataatggattgaa
cctctgaacctgtaagccagccccaattaaatgttgtcctttataagact
tgccttggtcatggtgtctgttcacagcagtaaaaccctaactaagacac
agggcaaagacatgcatttatacacagaactggagttagtgcttactgag
agagagctactaggacatggctaccatttcattgacttctgtggggggag
gcgttgagggggggcggtgtgcgtacgtgagagcaaagctgcatttgaca
tccctgaagagaaaattctaaagcaattaagtttctcataaagcaggcaa
gagtggccggggtttttactcactccattgaattgatgaaatagatcaca
agagacccgatgcttagtacaaagacaaggatcacctacaaacggaaaag
gacagaggcgagagatgcaagtttattttatggtatggagtaaacaagcc
cacaaaattgtgttttctgctttaaatgaggtaaatgctgttgtgtattt
ttattatatgcaggcagggaaggggagaaaatggttttgccttacctttc
ctttgtatgggcagctcagcattcacaccttcatttatgcctgtattcat
tcattcattcactcattcactgagaaagtggactaaggtcccactagtca
atgtgtaccattgtatttaccagttttagctctcgcccactcaagaataa
ctgggtaccttacccttcttgctcctcct
gaattctcattacatacaagaatggcagcctacattacatattattagaa
agaaggtgggttgtggtttaaggaggaactggagtactgtattattcatg
aaagggttagtagtacagaactgccctggggcatgtttttcactaggccc
agaggaacagaataactaggtatttaccaagggacccctggtggtgagtt
taacaatagaccagcattgcatcagaccactcacctggttcctgtgaata
cctgattttagatagggctgttcctatctcaactgtaaacattgcctggt
tcctgccagtctttttgcatgcattttttgttttgtgtcagataacttca
atgtaccttggctgatgtgtcacctaacttctttgctttcttctataata
tataagtctgatgctctttttgagaaattacgtccacaaattatagaata
aatcaacatcagaacataaggaaaaataaaggattaacattaccacagtg
aatatcaacagggatgttctcgacgcctctttttactgatcttggccgac
cttgctcagtggatgttgaaccccattcatcagaccctgcaattggctgg
taatgcaccatgagcttaaacagaaaagatcagagcaatatagtctacat
tcacttgtgatttaagactttttttttttttttttttttggagacagggt
ttctctgtatagccctggctgtcctgaactcactttgtagaccaggctgg
ccttgaactcagaaatctgcctgcctctgcctcccaagtgctgggattaa
aggcgtgggcgatttaagacattttgaatgacaaaaacaaatctgtcata
taaccaaccttaattggagttttgacatgcaagtcctatagcctgcaagt
aaaaaagaagcctgacatacatttaaactagcagatcagatgggcaggtg
tggtggtgcatgcttttatctgcacatgggagcagagcagacttctgtga
gttggatcagcacatgactcatccagctctgtgctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_26968244_26969279
seq2: B6Ng01-263K05.b_43_1071 (reverse)

seq1  AGGAGGAGCAGGAAGGGTAAGGTACCCAGTTTATTCTGAAGTGGGCGAGA  50
      |||||||||| |||||||||||||||||| |||||||  |||||||||||
seq2  AGGAGGAGCAAGAAGGGTAAGGTACCCAG-TTATTCTTGAGTGGGCGAGA  49

seq1  GCTAAAACTGGGTAAATACAATGGGTACACATTGACTTAGTGGGACCCTT  100
      ||||||||| |||||||||||| ||||||||||||| |||||||| ||||
seq2  GCTAAAACT-GGTAAATACAAT-GGTACACATTGAC-TAGTGGGA-CCTT  95

seq1  AGTCCACTTTTCTTCAGTGAATGAGTGAATGAATGAATGAATACAGGCAT  150
      ||||||||||   |||||||||||||||||||||||||||||||||||||
seq2  AGTCCACTTT--CTCAGTGAATGAGTGAATGAATGAATGAATACAGGCAT  143

seq1  AAATGAAGGTGTGAATGCTGAGCTGCCCATACAAAGGAAAGGTAAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAAGGTGTGAATGCTGAGCTGCCCATACAAAGGAAAGGTAAGGCAA  193

seq1  AACCATTTTCTCCCCTTCCCTGCCTGCATATAATAAAAATACACAACAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTTTCTCCCCTTCCCTGCCTGCATATAATAAAAATACACAACAGC  243

seq1  ATTTACCTCATTTAAAGCAGAAAACACAATTTTGTGGGCTTGTTTACTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTCATTTAAAGCAGAAAACACAATTTTGTGGGCTTGTTTACTCC  293

seq1  ATACCATAAAATAAACTTGCATCTCTCGCCTCTGTCCTTTTCCGTTTGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCATAAAATAAACTTGCATCTCTCGCCTCTGTCCTTTTCCGTTTGTA  343

seq1  GGTGATCCTTGTCTTTGTACTAAGCATCGGGTCTCTTGTGATCTATTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATCCTTGTCTTTGTACTAAGCATCGGGTCTCTTGTGATCTATTTCA  393

seq1  TCAATTCAATGGAGTGAGTAAAAACCCCGGCCACTCTTGCCTGCTTTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTCAATGGAGTGAGTAAAAACCCCGGCCACTCTTGCCTGCTTTATG  443

seq1  AGAAACTTAATTGCTTTAGAATTTTCTCTTCAGGGATGTCAAATGCAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTAATTGCTTTAGAATTTTCTCTTCAGGGATGTCAAATGCAGCT  493

seq1  TTGCTCTCACGTACGCACACCGCCCCCCCTCAACGCCTCCCCCCACAGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTCACGTACGCACACCGCCCCCCCTCAACGCCTCCCCCCACAGAA  543

seq1  GTCAATGAAATGGTAGCCATGTCCTAGTAGCTCTCTCTCAGTAAGCACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATGAAATGGTAGCCATGTCCTAGTAGCTCTCTCTCAGTAAGCACTA  593

seq1  ACTCCAGTTCTGTGTATAAATGCATGTCTTTGCCCTGTGTCTTAGTTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTTCTGTGTATAAATGCATGTCTTTGCCCTGTGTCTTAGTTAGG  643

seq1  GTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTACTGCTGTGAACAGACACCATGACCAAGGCAAGTCTTATAAAGGA  693

seq1  CAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAATCCATTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAATCCATTATC  743

seq1  ATAAAGGTGGGAGCATGGCAGCATCCAGGCAGGCATGGTGCAGGCAGAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGGTGGGAGCATGGCAGCATCCAGGCAGGCATGGTGCAGGCAGAGC  793

seq1  TGAGAGTTCTACATCTTCATCTGAAGGCTCTTAGTGGAGTACTGACTTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTTCTACATCTTCATCTGAAGGCTCTTAGTGGAGTACTGACTTCC  843

seq1  AGGCAGCTAGGGTGAGGGTCTTAAAGCCCATGCCCACACTGACAGGCCCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGCTAGGGTGAGGGTCTTAAAGCCCATGCCCACACTGACAGGCCCA  893

seq1  CTCCAACAGGGCCACACCTTCTAATCCTGCCACTCCCTGGTCCAAGCATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAACAGGGCCACACCTTCTAATCCTGCCACTCCCTGGTCCAAGCATA  943

seq1  TAGAAATCATTACACTCTGTATCTTGCCACCTCCATTGCTAGTGCTGAGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAATCATTACACTCTGTATCTTGCCACCTCCATTGCTAGTGCTGAGG  993

seq1  TGGGGTATACCCACCTGGGGTAAAAATTAAGAATTC  1036
      ||||||||||||||||||||||||||||||||||||
seq2  TGGGGTATACCCACCTGGGGTAAAAATTAAGAATTC  1029

seq1: chr8_26859706_26860757
seq2: B6Ng01-263K05.g_65_1101

seq1  GAATTCTCATTACATACAAGAATGGCAGCCTACATTACATATTATTAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATTACATACAAGAATGGCAGCCTACATTACATATTATTAGAA  50

seq1  AGAAGGTGGGTTGTGGTTTAAGGAGGAACTGGAGTACTGTATTATTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGTGGGTTGTGGTTTAAGGAGGAACTGGAGTACTGTATTATTCATG  100

seq1  AAAGGGTTAGTAGTACAGAACTGCCCTGGGGCATGTTTTTCACTAGGCCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTAGTAGTACAGAACTGCCCTGGGGCATGTTTTTCACTAGGCCC  150

seq1  AGAGGAACAGAATAACTAGGTATTTACCAAGGGACCCCTGGTGGTGAGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAACAGAATAACTAGGTATTTACCAAGGGACCCCTGGTGGTGAGTT  200

seq1  TAACAATAGACCAGCATTGCATCAGACCACTCACCTGGTTCCTGTGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAATAGACCAGCATTGCATCAGACCACTCACCTGGTTCCTGTGAATA  250

seq1  CCTGATTTTAGATAGGGCTGTTCCTATCTCAACTGTAAACATTGCCTGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTTTAGATAGGGCTGTTCCTATCTCAACTGTAAACATTGCCTGGT  300

seq1  TCCTGCCAGTCTTTTTGCATGCATTTTTTGTTTTGTGTCAGATAACTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCAGTCTTTTTGCATGCATTTTTTGTTTTGTGTCAGATAACTTCA  350

seq1  ATGTACCTTGGCTGATGTGTCACCTAACTTCTTTGCTTTCTTCTATAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACCTTGGCTGATGTGTCACCTAACTTCTTTGCTTTCTTCTATAATA  400

seq1  TATAAGTCTGATGCTCTTTTTGAGAAATTACGTCCACAAATTATAGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGTCTGATGCTCTTTTTGAGAAATTACGTCCACAAATTATAGAATA  450

seq1  AATCAACATCAGAACATAAGGAAAAATAAAGGATTAACATTACCACAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACATCAGAACATAAGGAAAAATAAAGGATTAACATTACCACAGTG  500

seq1  AATATCAACAGGGATGTTCTCGACGCCTCTTTTTACTGATCTTGGCCGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAACAGGGATGTTCTCGACGCCTCTTTTTACTGATCTTGGCCGAC  550

seq1  CTTGCTCAGTGGATGTTGAACCCCATTCATCAGACCCTGCAATTGGCTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTCAGTGGATGTTGAACCCCATTCATCAGACCCTGCAATTGGCTGG  600

seq1  TAATGCACCATGAGCTTAAACAGAAAAGATCAGAGCAATATAGTCTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCACCATGAGCTTAAACAGAAAAGATCAGAGCAATATAGTCTACAT  650

seq1  TCACTTGTGATTTAAGACTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGTGATTTAAGACTTTTTTTTTTTTTTTTTTTTTGGAGACAGGGT  700

seq1  TTCTCTGTATAGCCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGTATAGCCCTGGCTGTCCTGAACTCACTTTGTAGACCAGGCTGG  750

seq1  CCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGAACTCAGAAATCTGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAA  800

seq1  AGGCGTGGGCGATTTAAGACATTTTGAATGACAAAAACAAATCTGTCATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCGTGGGCGATTTAAGACATTTTGAATGACAAAAACAAATCTGTCATA  850

seq1  TAACCAAACCTTAATTGGAGTTTTGACATGCAAGTCCTATAGCCTGCAAG  900
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACC-AACCTTAATTGGAGTTTTGACATGCAAGTCCTATAGCCTGCAAG  899

seq1  TAAAAAAGAAGCCTGACAATACA-TTAAACTAGCAGATCAGATGGGCCAG  949
      ||||||||||||||||| ||||| |||||||||||||||||||||| |||
seq2  TAAAAAAGAAGCCTGAC-ATACATTTAAACTAGCAGATCAGATGGG-CAG  947

seq1  GTGTGGTGGTGCATGCTTTTAATTCCTGCACATGGGAGGCAGAAGCAAGA  999
      |||||||||||||||||||||    |||||||||||| |||| ||||   
seq2  GTGTGGTGGTGCATGCTTTTA---TCTGCACATGGGA-GCAG-AGCA--G  990

seq1  ACTTCTGTGAGTTTGAATCAGCACATGAACCTCATCCCCAGCTCTGGTGC  1049
      ||||||||||| ||| ||||||||||||  |||||  |||||||| ||||
seq2  ACTTCTGTGAG-TTGGATCAGCACATGA--CTCAT--CCAGCTCT-GTGC  1034

seq1  TGA  1052
      |||
seq2  TGA  1037