BAC Information

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BAC

Clone NameB6Ng01-263K07
Chromosome8 (Build37)
Map Location 124,548,545 - 124,549,646
singlet/doubletsinglet
Overlap geneBanp
Upstream geneLOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1, 1700018B08Rik, Fbxo31, Map1lc3b, Zcchc14, Jph3, Klhdc4, Slc7a5, BC048644, Car5a
Downstream geneGm22, Zfpm1, Trhr2, 5830416A07Rik, Il17c, Cyba, Mvd, Snai3, Rnf166, 2310061F22Rik, Cdt1, Aprt, Galns, Trappc2l, Pabpnl1, Cbfa2t3h, C230057M02Rik, A530010L16Rik, BC021611, LOC100043225, Cdh15, Ankrd11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263K07.bB6Ng01-263K07.g
ACCGA067757GA067758
length7221,110
definitionB6Ng01-263K07.b B6Ng01-263K07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctacagaaatgaaagggaacccaagtatacaatacagaactgaca
aagacgcacagagctggggacacacccaacctcaaagctgactaaaccta
caagagaacataaaaggaagcccacaggcttgtgtgtgtgaatatttggt
ccccggctgtgttggttcaggagaggaagtgggaggacactcagggtcca
gacatcaaccctcaagtgcagtacggtgtttgagaagacaaagggcagag
cgccagcaggtcaagggggtcaactgggtctctacgtgtggcatgacgaa
gccgggttccaacctcacgccatttacagaagggaattcagaatgggctg
aagcctgaattcaaggctaaaccctgataggcttggacagactcaggagt
gaatctttatgaccttgatttagcaacagtcttttagatatgggcccaaa
gtcacacgtggcaacaaggcaaatatggcttccttgagcaaattcctttg
catcaaatgatgatgttaagagggtggccgagaagtgcagaggatgggag
gaaacactttgcaaactgtctgataagggctgagcctagaatatacaact
aaccctctcctctcccctcctcttccccccctcctcttccccctcctctt
tccccctccttctcctaccccctcctctttccccctcctcctcttccccc
ctacctccttttttttatcgca
gaattcctttcctgaaggcctcggaatgacatcttccaggttctcagaga
aggaacttgggcctaagtgaagacttcccatctgcaggcctcagccatga
cccccatcacgcctcaagacacttccttcagtgtgccacacagctgtgca
tagctgcccacacctgggctgcactcctcctcctcctcctcctcctcctc
ctatttatttatttatttatttatttatttataaactggctatggcctca
gccatgccatcctcagtagggagagtggaaacttttttgtttatctttaa
aaatcagagacttacatgtacagcaagagctgtcaggtgccagccatgtg
agaccttggcctcatgtggtgcagaacctatgctaactctgcaccaaatc
ttaggtgacttatccttcagtgcatctgcagtctagcagagatggaagag
cagtcattattccaaggttgcaagtcctcaccttgaagcagtgacttcat
agactttctcatacacttcgttgaaaggtgccatgtctttaagctgttcc
aagatgccacttagaacactggggcagtttctgtaggaagtcagtgtgac
cctgaggttctagggaaatatgtcaggttaaaaatgtggtgtgtctaatt
acagttgtttctcggggcaccgtgaggtaaggctgggaagttgtcagctg
tatgcccagctgcccacgttcttctgggtggatgtgagacatgcttgtct
ctcctcaggtcaggggtggcctggcaccttggcttctgaaagttggcgtg
ccttttctaattgtgaaccttgtggctctgcataaacacataaggtggct
tgctgacacacacatgtgctactgtgtttttctagaaccctttttcattt
ctctccctcccaccccctttgcagaccgcagaggcccctgcagcccactc
tgcagcccgacatgcagcttggaccatggggccattccagatccagtgag
gccaggcactgcaggagcacgcgtccagctgcttcgctgacctgtcccac
tcgtgccctgcttctctgctttcatgcagccactggcagttctgctgggc
attctgagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_124548545_124549646
seq2: B6Ng01-263K07.g_66_1175

seq1  GAATTCCTTTCCTGAAGGCCTCGGAATGACATCTTCCAGGTTCTCAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCCTGAAGGCCTCGGAATGACATCTTCCAGGTTCTCAGAGA  50

seq1  AGGAACTTGGGCCTAAGTGAAGACTTCCCATCTGCAGGCCTCAGCCATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTGGGCCTAAGTGAAGACTTCCCATCTGCAGGCCTCAGCCATGA  100

seq1  CCCCCATCACGCCTCAAGACACTTCCTTCAGTGTGCCACACAGCTGTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCATCACGCCTCAAGACACTTCCTTCAGTGTGCCACACAGCTGTGCA  150

seq1  TAGCTGCCCACACCTGGGCTGCACTCCTCCTCCTCCTCCTCCTCCTCCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTGCCCACACCTGGGCTGCACTCCTCCTCCTCCTCCTCCTCCTCCTC  200

seq1  CTATTTATTTATTTATTTATTTATTTATTTATAAACTGGCTATGGCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTATTTATTTATTTATTTATTTATTTATAAACTGGCTATGGCCTCA  250

seq1  GCCATGCCATCCTCAGTAGGGAGAGTGGAAACTTTTTTGTTTATCTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCCATCCTCAGTAGGGAGAGTGGAAACTTTTTTGTTTATCTTTAA  300

seq1  AAATCAGAGACTTACATGTACAGCAAGAGCTGTCAGGTGCCAGCCATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAGAGACTTACATGTACAGCAAGAGCTGTCAGGTGCCAGCCATGTG  350

seq1  AGACCTTGGCCTCATGTGGTGCAGAACCTATGCTAACTCTGCACCAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCTTGGCCTCATGTGGTGCAGAACCTATGCTAACTCTGCACCAAATC  400

seq1  TTAGGTGACTTATCCTTCAGTGCATCTGCAGTCTAGCAGAGATGGAAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTGACTTATCCTTCAGTGCATCTGCAGTCTAGCAGAGATGGAAGAG  450

seq1  CAGTCATTATTCCAAGGTTGCAAGTCCTCACCTTGAAGCAGTGACTTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCATTATTCCAAGGTTGCAAGTCCTCACCTTGAAGCAGTGACTTCAT  500

seq1  AGACTTTCTCATACACTTCGTTGAAAGGTGCCATGTCTTTAAGCTGTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTCTCATACACTTCGTTGAAAGGTGCCATGTCTTTAAGCTGTTCC  550

seq1  AAGATGCCACTTAGAACACTGGGGCAGTTTCTGTAGGAAGTCAGTGTGAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCCACTTAGAACACTGGGGCAGTTTCTGTAGGAAGTCAGTGTGAC  600

seq1  CCTGAGGTTCTAGGGAAATATGTCAGGTTAAAAATGTGGTGTGTCTAATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGGTTCTAGGGAAATATGTCAGGTTAAAAATGTGGTGTGTCTAATT  650

seq1  ACAGTTGTTTCTCGGGGCACCGTGAGGTAAGGCTGGGAAGTTGTCAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGTTTCTCGGGGCACCGTGAGGTAAGGCTGGGAAGTTGTCAGCTG  700

seq1  TATGCCCAGCTGCCCACGTTCTTCTGGGTGGATGTGAGACATGCTTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCCAGCTGCCCACGTTCTTCTGGGTGGATGTGAGACATGCTTGTCT  750

seq1  CTCCTCAGGTCAGGGGTGGCCTGGCACCTTGGCTTCTG-AAGTTGGCGTG  799
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCCTCAGGTCAGGGGTGGCCTGGCACCTTGGCTTCTGAAAGTTGGCGTG  800

seq1  CCTTTTCTAATTGTGAACCTTGTGGCTCTGCAT-AACACAT-AGGTGGCT  847
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  CCTTTTCTAATTGTGAACCTTGTGGCTCTGCATAAACACATAAGGTGGCT  850

seq1  TGCTGACACACACATGTGCTACTGTGTTTTTCTAGAACCC-TTTTCATTT  896
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGCTGACACACACATGTGCTACTGTGTTTTTCTAGAACCCTTTTTCATTT  900

seq1  CTCTCCCTCCCACCCCC-TTGCAGACCGCAGAGG-CCCTGCAGCCCACTC  944
      ||||||||||||||||| |||||||||||||||| |||||||||||||||
seq2  CTCTCCCTCCCACCCCCTTTGCAGACCGCAGAGGCCCCTGCAGCCCACTC  950

seq1  TGCAGCCCGACATGCAGCTT-GAACATGGGGCCA-TCCAGATCCAGTGAG  992
      |||||||||||||||||||| || |||||||||| |||||||||||||||
seq2  TGCAGCCCGACATGCAGCTTGGACCATGGGGCCATTCCAGATCCAGTGAG  1000

seq1  GCCAGGCACTGCAGGAGCACCGCGTCACAGCTGC-TCGCTGACCCTGCCC  1041
      ||||||||||||||||||| |||||| ||||||| ||||||| |||| ||
seq2  GCCAGGCACTGCAGGAGCA-CGCGTC-CAGCTGCTTCGCTGA-CCTGTCC  1047

seq1  CACTCGTGCCCTGC-TCTCTTGCTTCAGCAAGCAACTGCAGGTTCTGCTG  1090
      |||||||||||||| |||||   ||||   ||| ||||   |||||||||
seq2  CACTCGTGCCCTGCTTCTCTGCTTTCATGCAGCCACTGGCAGTTCTGCTG  1097

seq1  GGCA-TCTGAGAG  1102
      |||| ||||||||
seq2  GGCATTCTGAGAG  1110