BAC Information

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BAC

Clone NameB6Ng01-264F11
Chromosome8 (Build37)
Map Location 66,446,285 - 66,574,558
singlet/doubletdoublet
Overlap geneTll1
Upstream geneSpock3, LOC384831, EG244495
Downstream geneLOC100040989, Cpe, Sc4mol, Klhl2, LOC100040903, LOC619647, 3110005G23Rik, Trim75, Trim60
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264F11.bB6Ng01-264F11.g
ACCGA068270GA068271
length1921,106
definitionB6Ng01-264F11.b B6Ng01-264F11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(66,574,367 - 66,574,558)(66,446,285 - 66,447,402)
sequence
gaattcaactattttggatactttttgtattgaaatcacacgtgtatatc
cctttgtgattgacatatgtcagccatttagaattttttttaagacttat
cacagcataatttacttccatgatactgatgaataatgctatcatgatag
cataatagttttggtagattgcatatgtatatggtgtgtgtg

gaattccctaatctaatagcaatactacaatctttataaggggaacatat
ctttatttgtaaaaatgggtgaaagtaattccaaccctaattcaatcttg
tactgtgagctttcttaattttttgtatactgctctttatcagagactct
cattgcctatgattgaataacatggaaaacttacatatcctgaatttttc
cttaactcaccatgtacattaagcataataattctatcattttggcagta
acaaaaaagcgaaccagataaaacttatcaagcaattggatttaaataat
ccttctttctttccttcttcaaggaaaaacattattatttatagaaatac
gatccctaccaaacagttacaaaaaccaggtaccaagcactgaaacacag
gagtctaataggccactcccattcaaactgctacattggaaggtagttat
catcatcatctgccttgttggcaaaatcagtcatggtgaaggtgatagtc
aaaaggcaaagtcatcattattcagacttcttttgatttattagtaaagc
cactttgcttgctcataatcgcttagcttatcttaaaccatcagtctaaa
aatatctacaaaagagtttttcatctcttattaaatctatccatcatata
gagtcataaaagtatatcaatggctagctaacatgcagaatttaagttgc
catgtaaacttaagttttgatatgaatcattgttccccaaatgttaatca
tactactaagagttagtgcccatttctccacatagacacatacataaaat
attaatgaatttacccatttcactagagttatagtgccacaaacaggtaa
atacaaattatgtttacctattactaaatttcttcttcttagtcaccaag
ttatatgtaaccatttttttttaaacttgctatagaatgagggataacag
ctaaatttaaatgtatattacagagacaaatattactttattttatcact
cattgcagttcatttgtcccatcatcgagaaaagtagagttaaagtcttt
tttctttttgagcagtgtatagttatatttcttagagaaacgactactat
agaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66574367_66574558
seq2: B6Ng01-264F11.b_37_228 (reverse)

seq1  CACACACACCATATACATATGCAATCTACCAAAACTATTATGCTATCATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACCATATACATATGCAATCTACCAAAACTATTATGCTATCATG  50

seq1  ATAGCATTATTCATCAGTATCATGGAAGTAAATTATGCTGTGATAAGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATTATTCATCAGTATCATGGAAGTAAATTATGCTGTGATAAGTCT  100

seq1  TAAAAAAAATTCTAAATGGCTGACATATGTCAATCACAAAGGGATATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAAAATTCTAAATGGCTGACATATGTCAATCACAAAGGGATATACA  150

seq1  CGTGTGATTTCAATACAAAAAGTATCCAAAATAGTTGAATTC  192
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGATTTCAATACAAAAAGTATCCAAAATAGTTGAATTC  192


seq1: chr8_66446285_66447402
seq2: B6Ng01-264F11.g_66_1171

seq1  GAATTCCCTAATCTAATAGCAATACTACAATCTTTATAAGGGGAACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTAATCTAATAGCAATACTACAATCTTTATAAGGGGAACATAT  50

seq1  CTTTATTTGTAAAAATGGGTGAAAGTAATTCCAACCCTAATTCAATCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATTTGTAAAAATGGGTGAAAGTAATTCCAACCCTAATTCAATCTTG  100

seq1  TACTGTGAGCTTTCTTAATTTTTTGTATACTGCTCTTTATCAGAGACTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTGAGCTTTCTTAATTTTTTGTATACTGCTCTTTATCAGAGACTCT  150

seq1  CATTGCCTATGATTGAATAACATGGAAAACTTACATATCCTGAATTTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTATGATTGAATAACATGGAAAACTTACATATCCTGAATTTTTC  200

seq1  CTTAACTCACCATGTACATTAAGCATAATAATTCTATCATTTTGGCAGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACTCACCATGTACATTAAGCATAATAATTCTATCATTTTGGCAGTA  250

seq1  ACAAAAAAGCGAACCAGATAAAACTTATCAAGCAATTGGATTTAAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAAAGCGAACCAGATAAAACTTATCAAGCAATTGGATTTAAATAAT  300

seq1  CCTTCTTTCTTTCCTTCTTCAAGGAAAAACATTATTATTTATAGAAATAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTCTTTCCTTCTTCAAGGAAAAACATTATTATTTATAGAAATAC  350

seq1  GATCCCTACCAAACAGTTACAAAAACCAGGTACCAAGCACTGAAACACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCTACCAAACAGTTACAAAAACCAGGTACCAAGCACTGAAACACAG  400

seq1  GAGTCTAATAGGCCACTCCCATTCAAACTGCTACATTGGAAGGTAGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTAATAGGCCACTCCCATTCAAACTGCTACATTGGAAGGTAGTTAT  450

seq1  CATCATCATCTGCCTTGTTGGCAAAATCAGTCATGGTGAAGGTGATAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATCATCTGCCTTGTTGGCAAAATCAGTCATGGTGAAGGTGATAGTC  500

seq1  AAAAGGCAAAGTCATCATTATTCAGACTTCTTTTGATTTATTAGTAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCAAAGTCATCATTATTCAGACTTCTTTTGATTTATTAGTAAAGC  550

seq1  CACTTTGCTTGCTCATAATCGCTTAGCTTATCTTAAACCATCAGTCTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTGCTTGCTCATAATCGCTTAGCTTATCTTAAACCATCAGTCTAAA  600

seq1  AATATCTACAAAAGAGTTTTTCATCTCTTATTAAATCTATCCATCATATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCTACAAAAGAGTTTTTCATCTCTTATTAAATCTATCCATCATATA  650

seq1  GAGTCATAAAAGTATATCAATGGCTAGCTAACATGCAGAATTTAAGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATAAAAGTATATCAATGGCTAGCTAACATGCAGAATTTAAGTTGC  700

seq1  CATGTAAACTTAAGTTTTGATATGAATCATTGTTCCCCAAATGTTAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAACTTAAGTTTTGATATGAATCATTGTTCCCCAAATGTTAATCA  750

seq1  TACTACTAAGAGTTAGTGCCCATTTCTCCACATAGACACATACATAAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTAAGAGTTAGTGCCCATTTCTCCACATAGACACATACATAAAAT  800

seq1  ATTAATGAATTTACCCATTTCACTAGAGTTATAGTGCCACAAACAGGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATGAATTTACCCATTTCACTAGAGTTATAGTGCCACAAACAGGTAA  850

seq1  ATACAAATTATGTTTACCTATTACTAAATTTCTTCTTCTTAGTCACCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAAATTATGTTTACCTATTACTAAATTTCTTCTTCTTAGTCACCAAG  900

seq1  TTATATGTAACCA-TTTTTTTTAAACTTGCTATAGAATGAGGGATAACAG  949
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTATATGTAACCATTTTTTTTTAAACTTGCTATAGAATGAGGGATAACAG  950

seq1  CTAAATTTAAATGTATATTACAGAAGACAAATATTACTTTATTTTATCAC  999
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTAAATTTAAATGTATATTACAG-AGACAAATATTACTTTATTTTATCAC  999

seq1  TCATTGGCAGGTTCATTTGTCCCAATCAATCGAGAAAAGTTAAGGAGTTA  1049
      ||||| ||| ||||||||||||| ||| ||||||||||||    ||||||
seq2  TCATT-GCA-GTTCATTTGTCCC-ATC-ATCGAGAAAAGT---AGAGTTA  1042

seq1  AAGTC-TTTTTCTTTTTGAGCCAGTGTATTAGTTAATATTTCCTAGAGAA  1098
      ||||| |||||||||||||| ||||||| ||||| ||||||| |||||||
seq2  AAGTCTTTTTTCTTTTTGAG-CAGTGTA-TAGTT-ATATTTCTTAGAGAA  1089

seq1  ACAGAACTACTTATAGAATG  1118
      ||   ||||| |||||||||
seq2  AC--GACTAC-TATAGAATG  1106


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