BAC Information

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BAC

Clone NameB6Ng01-265L05
Chromosome8 (Build37)
Map Location 59,111,018 - 59,112,112
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431
Downstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265L05.bB6Ng01-265L05.g
ACCGA069282GA069283
length1,0541,084
definitionB6Ng01-265L05.b B6Ng01-265L05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggattttg
ttcaatgctttctcagcatctaacgagacgatcatgtggtttttgtcttt
gagtttgtttatatactggattaagttgattattttccatatattgaacc
atccctgcatccctgggatgaaacctacttggtcaggatggatgattgtt
ttgatgttttcttggattcggttagtgagaactttattgtggatttttgc
atcgatgttcataaggggaattggtatgaagttctgtatctttgttgggt
ctttttgtggtttaggtatcagagtaattgtggcttcatagaatgagttg
ggtagagtaccttccacttctattttgtggaatagtttgtgcagaaccgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggttggaagactattaatgactgcttctatttct
ttaggggatataggactgtttagatcattaacctgatcttgatttaactt
tggtacctggtatctgtctagaaacttgtccatttcatccaggttctcca
attttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
ttttcaggatctcttgttatgtctcccatttaatttctgattttgttaat
tagaatgctgaccctgtgccctctagtgagtctggctaagggtttgtcta
tcttgttgagtttctcaaagaactagctcctcctttggttgattctttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattgt
ttcctgctgtctactccttttgggtgaatttgcttccttttgttctagag
cttttaggtgtgttgtcaagctgctaacgtgtgctctctctagttatctt
ttggaaggcactcagagccatgagttttcctcttagaatgctttccattg
cgtccaatagttgaagtatgttgtggctccatttctattactttcccaag
agtc
gaattctttgttggtcttaatgaataaataagtggaaacctggattgaat
attaaatcatgaatactatttagacagattaaattaaattagggagcagg
ctaggtagggtaatggacattgaagctccaggtaatttaggaggtaatgc
ttagagatgctaggatgcagtttatggcatgtctggaatgccaaggtaaa
gactttagactttaaacaacacaaatagtatattttgctcaggatctttg
aatagctgagattagtctcctaatactgcccagtcagaattcggatcata
ggtcttcagagtctaatacaatattctggacaaaaatgctgtggtgaagg
tggagggttaatttgtaaaggttggaagagtaagacttaggcaaagagat
taaacattgagggtaacaagtgtgctgagggtcccctgagagaggggtca
tcatcagcactgggtcttcagtttgctgtaacactgggtctttctgtgta
cgtcatgctagccacaatgcagcacccttacatctgcaccaccatgccag
actataactgcagattcttgaatgtctgagaaaatgcagttgacttttaa
aaacactactaagatttgataatactgtgcgatccataatttttgagtcc
acaacatatgttaagatctgttgtaggtcctgggatatagcccggaataa
gccagagttgatccctcctctttatttggttggcttcttatagatgacac
aaggtgacaggtaatgaacagattacatgcatggaaggagaagagtgaaa
atcaggaaatgtatagaaacaggaggggggaacccacatccaagcgaagc
aagcagcaatgacacgtgaagcaattcttttcctccaaactagaccagtg
tgtcctctccaggaatactacaaaggggcccatcgtaaggactagagtag
gtaactgataaagaaagtagccccaggcacaagaaaagatgggatttaat
cacaaggagtcagactatttctgagagacagctaaaatttgagtagcaga
gacgaaaagtcagcatgaagacagctcttacagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59111018_59112112
seq2: B6Ng01-265L05.g_65_1148

seq1  GAATTCTTTGTTGGTCTTAATGAATAAATAAGTGGAAACCTGGATTGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTGGTCTTAATGAATAAATAAGTGGAAACCTGGATTGAAT  50

seq1  ATTAAATCATGAATACTATTTAGACAGATTAAATTAAATTAGGGAGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAATCATGAATACTATTTAGACAGATTAAATTAAATTAGGGAGCAGG  100

seq1  CTAGGTAGGGTAATGGACATTGAAGCTCCAGGTAATTTAGGAGGTAATGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTAGGGTAATGGACATTGAAGCTCCAGGTAATTTAGGAGGTAATGC  150

seq1  TTAGAGATGCTAGGATGCAGTTTATGGCATGTCTGGAATGCCAAGGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGATGCTAGGATGCAGTTTATGGCATGTCTGGAATGCCAAGGTAAA  200

seq1  GACTTTAGACTTTAAACAACACAAATAGTATATTTTGCTCAGGATCTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTAGACTTTAAACAACACAAATAGTATATTTTGCTCAGGATCTTTG  250

seq1  AATAGCTGAGATTAGTCTCCTAATACTGCCCAGTCAGAATTCGGATCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTGAGATTAGTCTCCTAATACTGCCCAGTCAGAATTCGGATCATA  300

seq1  GGTCTTCAGAGTCTAATACAATATTCTGGACAAAAATGCTGTGGTGAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCAGAGTCTAATACAATATTCTGGACAAAAATGCTGTGGTGAAGG  350

seq1  TGGAGGGTTAATTTGTAAAGGTTGGAAGAGTAAGACTTAGGCAAAGAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGGTTAATTTGTAAAGGTTGGAAGAGTAAGACTTAGGCAAAGAGAT  400

seq1  TAAACATTGAGGGTAACAAGTGTGCTGAGGGTCCCCTGAGAGAGGGGTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATTGAGGGTAACAAGTGTGCTGAGGGTCCCCTGAGAGAGGGGTCA  450

seq1  TCATCAGCACTGGGTCTTCAGTTTGCTGTAACACTGGGTCTTTCTGTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGCACTGGGTCTTCAGTTTGCTGTAACACTGGGTCTTTCTGTGTA  500

seq1  CGTCATGCTAGCCACAATGCAGCACCCTTACATCTGCACCACCATGCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCATGCTAGCCACAATGCAGCACCCTTACATCTGCACCACCATGCCAG  550

seq1  ACTATAACTGCAGATTCTTGAATGTCTGAGAAAATGCAGTTGACTTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATAACTGCAGATTCTTGAATGTCTGAGAAAATGCAGTTGACTTTTAA  600

seq1  AAACACTACTAAGATTTGATAATACTGTGCGATCCATAATTTTTGAGTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTACTAAGATTTGATAATACTGTGCGATCCATAATTTTTGAGTCC  650

seq1  ACAACATATGTTAAGATCTGTTGTAGGTCCTGGGATATAGCCCGGAATAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACATATGTTAAGATCTGTTGTAGGTCCTGGGATATAGCCCGGAATAA  700

seq1  GCCAGAGTTGATCCCTCCTCTTTATTTGGTTGGCTTCTTATAGATGACAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGAGTTGATCCCTCCTCTTTATTTGGTTGGCTTCTTATAGATGACAC  750

seq1  AAGGTGACAGGTAATGAACAGATTACATGCATGGAAGGAGAAGAGTGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGACAGGTAATGAACAGATTACATGCATGGAAGGAGAAGAGTGAAA  800

seq1  ATCAGGAAATGTATAGAAACAGGAGGGGGGAACCCACATCCAAGCGAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAAATGTATAGAAACAGGAGGGGGGAACCCACATCCAAGCGAAGC  850

seq1  AAAGCAGCAATGACACGTGAAGCAATTC-TTTCCTCCAAACTAGACCAGT  899
       ||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  -AAGCAGCAATGACACGTGAAGCAATTCTTTTCCTCCAAACTAGACCAGT  899

seq1  GTGTCCTCTCCAGGAATACTACAAA-GGGCCCATCGTAAGGACAAGAGTA  948
      ||||||||||||||||||||||||| ||||||||||||||||| ||||||
seq2  GTGTCCTCTCCAGGAATACTACAAAGGGGCCCATCGTAAGGACTAGAGTA  949

seq1  GGTAACTGATAAAGAAAAGTAGCCCCAGGCAACAAGAAAAGAT-GGAATT  997
      |||||||||||||| ||||||||||||||| |||||||||||| ||| ||
seq2  GGTAACTGATAAAG-AAAGTAGCCCCAGGC-ACAAGAAAAGATGGGATTT  997

seq1  AATCACCAGGAGTCAAGACTTATTTCTTGAGAGACAGCAAAATTTTGAGG  1047
      |||||| ||||||| |||| |||||| ||||||||||| ||| |||||| 
seq2  AATCACAAGGAGTC-AGAC-TATTTC-TGAGAGACAGCTAAAATTTGAG-  1043

seq1  TAAGCAGGAAGACAGAAAAGTTCAGCATGGAGGGACAGCTCTTACAGC  1095
        |||||  |||| |||||| |||||||| |  |||||||||||||||
seq2  -TAGCAG--AGAC-GAAAAG-TCAGCATGAA--GACAGCTCTTACAGC  1084