BAC Information

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BAC

Clone NameB6Ng01-267P17
Chromosome8 (Build37)
Map Location 42,013,990 - 42,015,180
singlet/doubletsinglet
Overlap genePdgfrl
Upstream geneLOC666959, EG632166, Fgf20, 2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7, LOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2
Downstream geneMtus1, Fgl1, Pcm1, Asah1, Frg1, LOC100039376, Gm1815, LOC671994
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267P17.bB6Ng01-267P17.g
ACCGA070964GA070965
length1,1881,091
definitionB6Ng01-267P17.b B6Ng01-267P17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcgacaagtgaaaaatgccatagccaactgcaagtgcacaaaaa
tattgcttaaaatcacctttggattatatatgtatagcagatacacataa
catacatgaagtctaagcttcatgcttagactccagtcccacatccaaga
aacttggttatgcttatgcaaacatgccaaaaatctggaaaaaaaaatgc
tagcctgacccacatctgttcccaagaatttttgagagcgattgtcagct
tgttcttggtcacagcagctctaggaagctgacatgctttggttagtgag
atctatgatgcttgtcagtttctaaaaaacgatgtcttcacactcgtttg
ttctctgttccctccatttgatcatgaagaccaggaagaaaggaccttat
agccttgaccacagaaaacaaccctctctctgaattttcctcatccttct
gacagcctctctctttctctctctcttgctctcagactaacctcttgaat
ggcactaagtatggaagacaggtttatctgttaaacatacaggccaagac
cctacatgctctgaaacatccaataatagcacttgtaagcaagatgtatt
ttgtgaatacttatttatgtatgcataggtttctggtctactgtctgttt
ccaagaagtaagccaacacaagaaagtgatacattgttcttgctggatag
tcatggtcactgtatcattttccttatcttctttcagacctggtttcccc
ctctaatgttttgatctttttttgaattttagaagctttcagattatcta
agtctaaattatctgaaagctattggatgaaggggcttgtgtaggtaaat
ggagatgcattaatggatcaatatgcgtatctcagcacttgactgtcaca
ttaaatatgcgtacgtaggtgataggaggtcagtaggtgactgcagtttt
atactttcagtgtggacgtggcagtgcacccactggacagaacgggtcct
gggagcagtccctcactaactggggtcttgcctatttattcacttgtttt
ccaggccttcagtccacgaatgggtagacagtgtggtcttcagtctccaa
ttataaaagaagaaatagcaataattttctctaaacttagattggacaag
acattgccactgctaggacagatgtctactcccgtgga
gaattctcactcaaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtcagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacagtcctccactgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagtttctca
gaaaattggacatagtactaccggaagctccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggtcacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtgatacatttacacaatg
gaatactactcagctattaaacaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggtatcatcctgagtgaggtaacccaatcacaaa
ggaactcgtgtgaatttggttttgtcgtggaatactttggtttctccatt
tatggtaattgagagtttggccgggtatagtagcctgggctggcatttgt
gttctcttagtgtctgtataacatctgtccacactcttctggctttcata
gtctctggtgaaaagtctggtgtgattctgataggtctgcctttatatgt
tacttgaccttttctcccttactgcttttaatatttctctctttatttag
tgcatttgtttgttctgattattatgtgtccagcggaattttcttttctg
gtccagtctttggagttcctgtaggtttcttgtatgttcatggggcatgt
cattctttaggtttgggaaaggttttcctcctattaattttggttgaact
atatttttccggcccctttaaggttgaataatcttcattctcaacaactc
cccatagcctggagaaatgtggcccttctccattgttgtccctgacttcc
ctggagtgttttggggtagggactcctttaggccttatgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_42013990_42015180
seq2: B6Ng01-267P17.b_47_1234 (reverse)

seq1  TCCAC-GGAGTAGACATCTGTCCTAAGCAGTGGCATTTGTCTTGCCCAAT  49
      ||||| |||||||||||||||||| ||||||||||  ||||||| |||| 
seq2  TCCACGGGAGTAGACATCTGTCCT-AGCAGTGGCA-ATGTCTTGTCCAA-  47

seq1  TCTAAAGTTTTTGAGAAA--TAATGCTATTTCT--CTTTATAATGGGAAG  95
      |||||   ||| ||||||  || ||||||||||   |||||||| || ||
seq2  TCTAA--GTTTAGAGAAAATTATTGCTATTTCTTCTTTTATAATTGG-AG  94

seq1  ACCTGAAGGACCACACTGTCTACCCATTTCGTGAACTGAAGG-CTTGAAA  144
      | ||||| |||||||||||||||||| |||||| |||||||| || ||||
seq2  A-CTGAA-GACCACACTGTCTACCCA-TTCGTGGACTGAAGGCCTGGAAA  141

seq1  AC-AGTGAATAAATAGGCCAAGACCCCAGTTAGTGAGGGACTGCTCCCAG  193
      || |||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ACAAGTGAATAAATAGG-CAAGACCCCAGTTAGTGAGGGACTGCTCCCAG  190

seq1  GACCCGTTCTGTCCAGT-GGTGCACTGCCACGTCCACACTTGAAAGTATA  242
      ||||||||||||||||| ||||||||||||||||||||| ||||||||||
seq2  GACCCGTTCTGTCCAGTGGGTGCACTGCCACGTCCACAC-TGAAAGTATA  239

seq1  AAACTGCAGTCACCTACTGACCTCCTATCACCTACGTACGCATATTTAAT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGCAGTCACCTACTGACCTCCTATCACCTACGTACGCATATTTAAT  289

seq1  GTGACAGTCAAGTGCTGAGATACGCATATTGATCCATTAATGCATCTCCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAGTCAAGTGCTGAGATACGCATATTGATCCATTAATGCATCTCCA  339

seq1  TTTACCTACACAAGCCCCTTCATCCAATAGCTTTCAGATAATTTAGACTT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCTACACAAGCCCCTTCATCCAATAGCTTTCAGATAATTTAGACTT  389

seq1  AGATAATCTGAAAGCTTCTAAAATTCAAAAAAAGATCAAAACATTAGAGG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAATCTGAAAGCTTCTAAAATTCAAAAAAAGATCAAAACATTAGAGG  439

seq1  GGGAAACCAGGTCTGAAAGAAGATAAGGAAAATGATACAGTGACCATGAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACCAGGTCTGAAAGAAGATAAGGAAAATGATACAGTGACCATGAC  489

seq1  TATCCAGCAAGAACAATGTATCACTTTCTTGTGTTGGCTTACTTCTTGGA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAGCAAGAACAATGTATCACTTTCTTGTGTTGGCTTACTTCTTGGA  539

seq1  AACAGACAGTAGACCAGAAACCTATGCATACATAAATAAGTATTCACAAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACAGTAGACCAGAAACCTATGCATACATAAATAAGTATTCACAAA  589

seq1  ATACATCTTGCTTACAAGTGCTATTATTGGATGTTTCAGAGCATGTAGGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATCTTGCTTACAAGTGCTATTATTGGATGTTTCAGAGCATGTAGGG  639

seq1  TCTTGGCCTGTATGTTTAACAGATAAACCTGTCTTCCATACTTAGTGCCA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGCCTGTATGTTTAACAGATAAACCTGTCTTCCATACTTAGTGCCA  689

seq1  TTCAAGAGGTTAGTCTGAGAGCAAGAGAGAGAGAAAGAGAGAGGCTGTCA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGAGGTTAGTCTGAGAGCAAGAGAGAGAGAAAGAGAGAGGCTGTCA  739

seq1  GAAGGATGAGGAAAATTCAGAGAGAGGGTTGTTTTCTGTGGTCAAGGCTA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATGAGGAAAATTCAGAGAGAGGGTTGTTTTCTGTGGTCAAGGCTA  789

seq1  TAAGGTCCTTTCTTCCTGGTCTTCATGATCAAATGGAGGGAACAGAGAAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTCCTTTCTTCCTGGTCTTCATGATCAAATGGAGGGAACAGAGAAC  839

seq1  AAACGAGTGTGAAGACATCGTTTTTTAGAAACTGACAAGCATCATAGATC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGAGTGTGAAGACATCGTTTTTTAGAAACTGACAAGCATCATAGATC  889

seq1  TCACTAACCAAAGCATGTCAGCTTCCTAGAGCTGCTGTGACCAAGAACAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAACCAAAGCATGTCAGCTTCCTAGAGCTGCTGTGACCAAGAACAA  939

seq1  GCTGACAATCGCTCTCAAAAATTCTTGGGAACAGATGTGGGTCAGGCTAG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAATCGCTCTCAAAAATTCTTGGGAACAGATGTGGGTCAGGCTAG  989

seq1  CATTTTTTTTTCCAGATTTTTGGCATGTTTGCATAAGCATAACCAAGTTT  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTTTTTTCCAGATTTTTGGCATGTTTGCATAAGCATAACCAAGTTT  1039

seq1  CTTGGATGTGGGACTGGAGTCTAAGCATGAAGCTTAGACTTCATGTATGT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATGTGGGACTGGAGTCTAAGCATGAAGCTTAGACTTCATGTATGT  1089

seq1  TATGTGTATCTGCTATACATATATAATCCAAAGGTGATTTTAAGCAATAT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTATCTGCTATACATATATAATCCAAAGGTGATTTTAAGCAATAT  1139

seq1  TTTTGTGCACTTGCAGTTGGCTATGGCATTTTTCACTTGTCGAGAATTC  1191
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGCACTTGCAGTTGGCTATGGCATTTTTCACTTGTCGAGAATTC  1188