BAC Information

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BAC

Clone NameB6Ng01-268A07
Chromosome8 (Build37)
Map Location 13,688,022 - 13,857,622
singlet/doubletdoublet
Overlap gene4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264
Upstream geneAtp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik, Rasa3
Downstream geneD8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, Dlgap2, LOC100041140, C030037F17Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268A07.bB6Ng01-268A07.g
ACCGA070991GA070992
length1,0951,193
definitionB6Ng01-268A07.b B6Ng01-268A07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,856,527 - 13,857,622)(13,688,022 - 13,689,233)
sequence
gaattccaatgtctaaaatttgttcttattttgggtttgtactacagtaa
gaaccaagattttaaaactctactaaaaatgaaacaaaacaaacaaacaa
acaaacaaacaaaaaactttatctatatatgcccatttaataacatgtcc
attattttcatgattggtataaaaatatatactctgttgaatataatagt
taaaaaaaaaagaaaagtgtatggcatgtttttgtggatatgcaagcatc
agacaaaggttaacctggggtactatttttcaggaaccatccaccttgtt
tttgagacagggtctcccactggggcctggcacttgccaagtgggtgaag
ctaggtcaagccccagggttcttcccgtcctcacctcacagtactggagt
tatgagtgtgcaacacctgcctgctgttttttttttttaaaaccacttct
ggggaattgaacttgggttcttgtgcttgcatgcagacactttattgact
gctcaacatgtttactaacttgagattgggtagtcataagactatcacca
cccctaatgtggcttttgggttcagaagccctaatttagaggaaagaaca
cagataccctgatcttttagggattccaggtttttgtttagttttgccta
tgtatgttgtgtagtatggatgttggtctctgggtgtgcgcacagaggcc
caaggttaatgctgggtatcttcctggatcactaatacgctgaggtgagg
tctctcagttgaaccgtgagcatgctgatttggctaatctggctagccaa
cttgttctgtagagtgcctatctccacccctgcctctcaactcctaccct
gccctgtagaatccaaaatgagttcaagaccacctagtccattccctctg
aagggactttcagaaacatagcagtcaaaatgactgagtctacagctgcc
aaaacaaactgttctcagaaaaaataaccataacaatatagcagttccca
gagaaatccccttaccccaacactgaattctgagaaaaaccacaaactgc
ctgaccttgctagaattcctgtgtatgttaatagcttgacccata
gaattccacaccttgtgttcttgaggctacggatgtcaactgtggaaaaa
tgcctacagccacatgtcattccagtgtgccctgctccaccctagtctct
tgaacctgtcctcatccactttgattctaatacaggaggtgtgggagagc
cctctagtggggcacagcgatgcccccaagatacagcctctgccccttag
ggcctcttaggaggtggttgtcttagaatgcagcctgtttagaggaggag
gcaggcctgctgtgccctgtcctaagacaaaatgcattcaagtgggacat
gtgggcgcccgaggactcctatgggcacctgcgggctgctaggggctcct
gcaggcacccgcagactcctgtggaaggccaggataagaggcttgggtgc
tgttttgctggttagaaaccttcctccctggccgggagaagagggcagaa
caagtcttattttggcgcctgatcttctggggcagcttcctgcttaagcc
ccaagcttcttttgtttgtccttttcaaatactccagagaattttctgaa
aggagagtgtgctgagagaggaggggcgaggaggtccttcttagaaggtt
gccccagccacctcctcatgggaagcatgcctgctggctagagtcctcta
ggttcttgcaaaatgtgtctggctctcccctggggagctgcgtccatttc
ctgccttgctttgatgaatgagcagtgagtgtccctccagaccgaggctc
cttgagtcttaacacttgctgtcccttgtctcttgagaaaattttacacg
gctccaggtgttgtaggtatatgagaccgatacacaagcaaacataaagg
acattgaatcaattataaagaattttatcttaaaatagctttttcatata
catgttaccatttattaaagataaaggacaaatttgcatgctagtgagat
gcatgggcttctatatttttacatgaagaattagccttgactgaatgagg
atgcaggacactttagtgccttcagagttaattaattattttgatctagg
aatcaagagtgtctggaggggagttactttgccataatggtatagtcaca
aattgcgcaaatatcacttcagaaccaatttagaatgtttaaacgttggt
ttctaaccccaacaacgttccatgggcaataatttttgaatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13856527_13857622
seq2: B6Ng01-268A07.b_49_1143 (reverse)

seq1  TATGGGTC-AGCTATTAACAT-CACAGGGAATTCTAGCAAGGTCAGGGCA  48
      |||||||| |||||||||||| |||| |||||||||||||||||| ||||
seq2  TATGGGTCAAGCTATTAACATACACA-GGAATTCTAGCAAGGTCA-GGCA  48

seq1  GTTTGTGGTTTTTCTCAGAATTCAGTGTTGGGGTAGGGGGATTTCTCTGG  98
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTTTGTGGTTTTTCTCAGAATTCAGTGTTGGGGTAAGGGGATTTCTCTGG  98

seq1  GAACTGCTAATATTGTTATGGTTA-TTTTTCTGAGAACAGTTTGTTTTGG  147
      |||||||| ||||||||||||||| |||||||||||||||||||||||||
seq2  GAACTGCT-ATATTGTTATGGTTATTTTTTCTGAGAACAGTTTGTTTTGG  147

seq1  CAGCTGTAGACTCAGTCATTTTGACTGCTATGTTTCTGAAAGTCCCTTCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTAGACTCAGTCATTTTGACTGCTATGTTTCTGAAAGTCCCTTCA  197

seq1  GAGGGGAATGGACTAGGTGGTCTTGAACTCATTTTGGATTCTACAGGGCA  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GA-GGGAATGGACTAGGTGGTCTTGAACTCATTTTGGATTCTACAGGGCA  246

seq1  GGGTAGGAGTTGAGAGGCAGGGGTGGAGATAGGCACTCTACAGAACAAGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAGTTGAGAGGCAGGGGTGGAGATAGGCACTCTACAGAACAAGT  296

seq1  TGGCTAGCCAGATTAGCCAAATCAGCATGCTCACGGTTCAACTGAGAGAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTAGCCAGATTAGCCAAATCAGCATGCTCACGGTTCAACTGAGAGAC  346

seq1  CTCACCTCAGCGTATTAGTGATCCAGGAAGATACCCAGCATTAACCTTGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTCAGCGTATTAGTGATCCAGGAAGATACCCAGCATTAACCTTGG  396

seq1  GCCTCTGTGCGCACACCCAGAGACCAACATCCATACTACACAACATACAT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGTGCGCACACCCAGAGACCAACATCCATACTACACAACATACAT  446

seq1  AGGCAAAACTAAACAAAAACCTGGAATCCCTAAAAGATCAGGGTATCTGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAACTAAACAAAAACCTGGAATCCCTAAAAGATCAGGGTATCTGT  496

seq1  GTTCTTTCCTCTAAATTAGGGCTTCTGAACCCAAAAGCCACATTAGGGGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTTCCTCTAAATTAGGGCTTCTGAACCCAAAAGCCACATTAGGGGT  546

seq1  GGTGATAGTCTTATGACTACCCAATCTCAAGTTAGTAAACATGTTGAGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGATAGTCTTATGACTACCCAATCTCAAGTTAGTAAACATGTTGAGCA  596

seq1  GTCAATAAAGTGTCTGCATGCAAGCACAAGAACCCAAGTTCAATTCCCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAAAGTGTCTGCATGCAAGCACAAGAACCCAAGTTCAATTCCCCA  646

seq1  GAAGTGGTTTTAAAAAAAAAAAACAGCAGGCAGGTGTTGCACACTCATAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGGTTTTAAAAAAAAAAAACAGCAGGCAGGTGTTGCACACTCATAA  696

seq1  CTCCAGTACTGTGAGGTGAGGACGGGAAGAACCCTGGGGCTTGACCTAGC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTACTGTGAGGTGAGGACGGGAAGAACCCTGGGGCTTGACCTAGC  746

seq1  TTCACCCACTTGGCAAGTGCCAGGCCCCAGTGGGAGACCCTGTCTCAAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCACTTGGCAAGTGCCAGGCCCCAGTGGGAGACCCTGTCTCAAAA  796

seq1  ACAAGGTGGATGGTTCCTGAAAAATAGTACCCCAGGTTAACCTTTGTCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGTGGATGGTTCCTGAAAAATAGTACCCCAGGTTAACCTTTGTCTG  846

seq1  ATGCTTGCATATCCACAAAAACATGCCATACACTTTTCTTTTTTTTTTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTGCATATCCACAAAAACATGCCATACACTTTTCTTTTTTTTTTAA  896

seq1  CTATTATATTCAACAGAGTATATATTTTTATACCAATCATGAAAATAATG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATATTCAACAGAGTATATATTTTTATACCAATCATGAAAATAATG  946

seq1  GACATGTTATTAAATGGGCATATATAGATAAAGTTTTTTGTTTGTTTGTT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTTATTAAATGGGCATATATAGATAAAGTTTTTTGTTTGTTTGTT  996

seq1  TGTTTGTTTGTTTTGTTTCATTTTTAGTAGAGTTTTAAAATCTTGGTTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGTTTTGTTTCATTTTTAGTAGAGTTTTAAAATCTTGGTTCT  1046

seq1  TACTGTAGTACAAACCCAAAATAAGAACAAATTTTAGACATTGGAATTC  1096
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTAGTACAAACCCAAAATAAGAACAAATTTTAGACATTGGAATTC  1095

seq1: chr8_13688022_13689233
seq2: B6Ng01-268A07.g_68_1260

seq1  GAATTCCACACCTTGTGTTCTTGAGGCTACGGATGTCAACTGTGGAAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCTTGTGTTCTTGAGGCTACGGATGTCAACTGTGGAAAAA  50

seq1  TGCCTACAGCCACATGTCATTCCAGTGTGCCCTGCTCCACCCTAGTCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACAGCCACATGTCATTCCAGTGTGCCCTGCTCCACCCTAGTCTCT  100

seq1  TGAACCTGTCCTCATCCACTTTGATTCTAATACAGGAGGTGTGGGAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCTGTCCTCATCCACTTTGATTCTAATACAGGAGGTGTGGGAGAGC  150

seq1  CCTCTAGTGGGGCACAGCGATGCCCCCAAGATACAGCCTCTGCCCCTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTAGTGGGGCACAGCGATGCCCCCAAGATACAGCCTCTGCCCCTTAG  200

seq1  GGCCTCTTAGGAGGTGGTTGTCTTAGAATGCAGCCTGTTTAGAGGAGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTTAGGAGGTGGTTGTCTTAGAATGCAGCCTGTTTAGAGGAGGAG  250

seq1  GCAGGCCTGCTGTGCCCTGTCCTAAGACAAAATGCATTCAAGTGGGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCCTGCTGTGCCCTGTCCTAAGACAAAATGCATTCAAGTGGGACAT  300

seq1  GTGGGCGCCCGAGGACTCCTATGGGCACCTGCGGGCTGCTAGGGGCTCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCGCCCGAGGACTCCTATGGGCACCTGCGGGCTGCTAGGGGCTCCT  350

seq1  GCAGGCACCCGCAGACTCCTGTGGAAGGCCAGGATAAGAGGCTTGGGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGCACCCGCAGACTCCTGTGGAAGGCCAGGATAAGAGGCTTGGGTGC  400

seq1  TGTTTTGCTGGTTAGAAACCTTCCTCCCTGGCCGGGAGAAGAGGGCAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCTGGTTAGAAACCTTCCTCCCTGGCCGGGAGAAGAGGGCAGAA  450

seq1  CAAGTCTTATTTTGGCGCCTGATCTTCTGGGGCAGCTTCCTGCTTAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTTATTTTGGCGCCTGATCTTCTGGGGCAGCTTCCTGCTTAAGCC  500

seq1  CCAAGCTTCTTTTGTTTGTCCTTTTCAAATACTCCAGAGAATTTTCTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTTCTTTTGTTTGTCCTTTTCAAATACTCCAGAGAATTTTCTGAA  550

seq1  AGGAGAGTGTGCTGAGAGAGGAGGGGCGAGGAGGTCCTTCTTAGAAGGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGTGTGCTGAGAGAGGAGGGGCGAGGAGGTCCTTCTTAGAAGGTT  600

seq1  GCCCCAGCCACCTCCTCATGGGAAGCATGCCTGCTGGCTAGAGTCCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGCCACCTCCTCATGGGAAGCATGCCTGCTGGCTAGAGTCCTCTA  650

seq1  GGTTCTTGCAAAATGTGTCTGGCTCTCCCCTGGGGAGCTGCGTCCATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTTGCAAAATGTGTCTGGCTCTCCCCTGGGGAGCTGCGTCCATTTC  700

seq1  CTGCCTTGCTTTGATGAATGAGCAGTGAGTGTCCCTCCAGACCGAGGCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTGCTTTGATGAATGAGCAGTGAGTGTCCCTCCAGACCGAGGCTC  750

seq1  CTTGAGTCTTAACACTTGCTGTCCCTTGTCTCTTGAGAAAATTTTACACG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTCTTAACACTTGCTGTCCCTTGTCTCTTGAGAAAATTTTACACG  800

seq1  GCTCCAGGTGTTGTAGGTATATGAGACCGATACACAAGCAAACAT-AAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GCTCCAGGTGTTGTAGGTATATGAGACCGATACACAAGCAAACATAAAGG  850

seq1  ACATTGAATCAATTATAAAGAATTTTATCTTAAAATAGCTTTTTCATATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGAATCAATTATAAAGAATTTTATCTTAAAATAGCTTTTTCATATA  900

seq1  CATGTTACCATTTATTAAAGATAAAGGACAAATTTGCATGCTAGTGAGAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTACCATTTATTAAAGATAAAGGACAAATTTGCATGCTAGTGAGAT  950

seq1  GCATGGGCTTCTATATTTTTACATGAAGAATTAAGCCTTGACTGAATGAG  999
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GCATGGGCTTCTATATTTTTACATGAAGAATT-AGCCTTGACTGAATGAG  999

seq1  GATGCAGGACACTTTTAGTGCCTTTCAGAGTTAA-TAAATATTTTGATCT  1048
      |||||||||||| ||||||||| ||||||||||| ||| |||||||||||
seq2  GATGCAGGACAC-TTTAGTGCC-TTCAGAGTTAATTAATTATTTTGATCT  1047

seq1  TAGAATCAGGAGTG-CTG--AGGGAGTTACTTTG-CATAAATGTATAGT-  1093
        |||||| ||||| |||   ||||||||||||| |||||  ||||||| 
seq2  AGGAATCAAGAGTGTCTGGAGGGGAGTTACTTTGCCATAATGGTATAGTC  1097

seq1  ACAAAAT-AGCAAAAATACATTTAGAACCATTTAAGAAATTGTTAAAAAG  1142
      ||||| |  ||||| ||   || ||||||| || ||||  |||| ||| |
seq2  ACAAATTGCGCAAATATCACTTCAGAACCAATTTAGAA--TGTTTAAACG  1145

seq1  TTTG-TTCTAACCCCAAACCAACATTCATTG---CATAATTTTTTGATGG  1188
      || | ||||||||||||  |||| |||  ||    |||||||||  ||||
seq2  TTGGTTTCTAACCCCAA--CAACGTTCCATGGGCAATAATTTTTGAATGG  1193

seq1  ATTTCTGGTCATCAACTTGAATGG  1212
                              
seq2  ------------------------  1193