BAC Information

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BAC

Clone NameB6Ng01-268I07
Chromosome8 (Build37)
Map Location 32,331,587 - 32,498,004
singlet/doubletdoublet
Overlap geneFut10, LOC666568, 7420700N18Rik
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, LOC666330
Downstream geneLOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268I07.bB6Ng01-268I07.g
ACCGA071353GA071354
length1,0641,043
definitionB6Ng01-268I07.b B6Ng01-268I07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,496,940 - 32,498,004)(32,331,587 - 32,333,001)
sequence
gaattccactgtacacttttattagccattcacctactagtggacatctg
ggttgatcccatttcctacacggtgtgaatagggcagcaatacatgtgga
tgcacagctatctctatggtgatatacatactctgctagggatatgccca
aattgtccacaagtactttttatgtctttctttgacttctcctaaatatc
ttctggttttaatcagtgtcaccaagagattatactcatattgctaacac
tggcacaagaccgaattagctttagctagagactttcagtaggtcctcaa
atgactcctttccccaagcaaattttgaagcagttgagaagacaccgggg
aaaggctagtgggggagaggagcagaaaaacaagctcctcctacattagc
ctcgagtctaagcctggtccctaagcaaggctccacctcacagacttaac
tcctggcattctgtccccatgattccctggcatctgcttttggtctgcct
ggattagcttttctcactcccatcttgagccacacagccttgagttttgt
aggagtagacggttgattaaaaagcctgatgtggtggcacagagttgtta
accccagcactcccatggcaagatgggagtcacagataggatgattgcct
aaatgttcatgggtcacctagcctagagtacagagcacagcataacggag
tgagacagagcacacttcaacaaagggaaaggaaaagaccgaccccccaa
cgttatcctctggtctacacatatgcaccatgtcatgcatttacccacat
tcatacataccacatacaatgatgatgatgacttaagtgcttttaaaaaa
attttttaaagtccactcaaagccatagctgtcctatggcgagaattctg
gaattttggtctccttaaaagcacagaaatattataagaatgtgctttca
tttaaatctcagatgtgggatgtgggggctgtttcagttatccacagcag
ctagcgatgattgcctcacgctcctagcagaggcgtggttttgccagctg
cagaagtttctgca
gaattcttctgtctgggtttgtttggctttatttatttattggaaagcag
ggagagttgaacccaagaccttgcacatgttaaggattcagctgtttcag
ctcattttagatcttggaatgtacttgcattgtatgtgttgaaatctgct
tgctctttcgatgggatattatggcactgcatattaatatatacctacca
catcaccaccaccaccaccatcaccaccaccaccatcaccatcatcacca
tcaccaccaccaccaccaccatcatcaccaccaccatcaccatcatcacc
atcaccaccaccaccatcatcaccaccactatcaccaccaccaccatcat
caccaccaccaccaccatcaccaccaccatcaccatcatcaccatcacca
ccaccatcaccatcatcatcatcatcgaattgctcacctaatctgttgct
gactgagttatcgagctatggtactgagattacatagagaaatttgacca
caggaaaggaagggagatacagctgttctccaggatagcaaggcatctta
gtttgggatgctatcacaaagcctcacagcctgagtgcttatggaacact
tgttacagttcctgagctgggaagcacaaggtcaaggcgagggaagccca
cattgggtgaggtccccctcctggctggtagatacctgtttccttgccgt
gtccacacttggtgtggagaatgagagtccggtttctcttcctctgggag
gaatactattgaaagcaggtgtaaacacatgaaaagataaaattattatg
ccgtcgtacacctaggaagtgactcttcttctctagtccacagagccctt
ttctcagtaaacacagtcgtaagatggagaagcagagatacagcaatggg
ttaagaaaggttcagtacagagtatattctttcaagtatcaggcagcttt
gcatcgtggtctgctcagacccgagtaacgctcaggagcagcgagctccc
tagcagagaccagctcttgcttctgtatcgtctctgcatggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32496940_32498004
seq2: B6Ng01-268I07.b_46_1109 (reverse)

seq1  TGCAGAAACTCTCTGCAGCTGGCAAAACCACGCCTCTGCTA-GAGCGTGA  49
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  TGCAGAAACT-TCTGCAGCTGGCAAAACCACGCCTCTGCTAGGAGCGTGA  49

seq1  GGCAAATCATCGCTAGCTGCTGTGGATAACTGAAACAG-CCCCACATCCC  98
      ||| |||||||||||||||||||||||||||||||||| |||||||| ||
seq2  GGC-AATCATCGCTAGCTGCTGTGGATAACTGAAACAGCCCCCACAT-CC  97

seq1  CACATCTGAGATTTAAATGAAAGCACATTCTTATAATATTTCTGTGCTTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGAGATTTAAATGAAAGCACATTCTTATAATATTTCTGTGCTTT  147

seq1  TAAGGAGACCAAAATTCCAGAATTCTCGCCATAGGACAGCTATGGCTTTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGACCAAAATTCCAGAATTCTCGCCATAGGACAGCTATGGCTTTG  197

seq1  AGTGGACTTTAAAAAATTTTTTTAAAAGCACTTAAGTCATCATCATCATT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGACTTTAAAAAATTTTTTTAAAAGCACTTAAGTCATCATCATCATT  247

seq1  GTATGTGGTATGTATGAATGTGGGTAAATGCATGACATGGTGCATATGTG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTGGTATGTATGAATGTGGGTAAATGCATGACATGGTGCATATGTG  297

seq1  TAGACCAGAGGATAACGTTGGGGGGTCGGTCTTTTCCTTTCCCTTTGTTG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCAGAGGATAACGTTGGGGGGTCGGTCTTTTCCTTTCCCTTTGTTG  347

seq1  AAGTGTGCTCTGTCTCACTCCGTTATGCTGTGCTCTGTACTCTAGGCTAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTGCTCTGTCTCACTCCGTTATGCTGTGCTCTGTACTCTAGGCTAG  397

seq1  GTGACCCATGAACATTTAGGCAATCATCCTATCTGTGACTCCCATCTTGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCCATGAACATTTAGGCAATCATCCTATCTGTGACTCCCATCTTGC  447

seq1  CATGGGAGTGCTGGGGTTAACAACTCTGTGCCACCACATCAGGCTTTTTA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGAGTGCTGGGGTTAACAACTCTGTGCCACCACATCAGGCTTTTTA  497

seq1  ATCAACCGTCTACTCCTACAAAACTCAAGGCTGTGTGGCTCAAGATGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACCGTCTACTCCTACAAAACTCAAGGCTGTGTGGCTCAAGATGGGA  547

seq1  GTGAGAAAAGCTAATCCAGGCAGACCAAAAGCAGATGCCAGGGAATCATG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAAAGCTAATCCAGGCAGACCAAAAGCAGATGCCAGGGAATCATG  597

seq1  GGGACAGAATGCCAGGAGTTAAGTCTGTGAGGTGGAGCCTTGCTTAGGGA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACAGAATGCCAGGAGTTAAGTCTGTGAGGTGGAGCCTTGCTTAGGGA  647

seq1  CCAGGCTTAGACTCGAGGCTAATGTAGGAGGAGCTTGTTTTTCTGCTCCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCTTAGACTCGAGGCTAATGTAGGAGGAGCTTGTTTTTCTGCTCCT  697

seq1  CTCCCCCACTAGCCTTTCCCCGGTGTCTTCTCAACTGCTTCAAAATTTGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCCACTAGCCTTTCCCCGGTGTCTTCTCAACTGCTTCAAAATTTGC  747

seq1  TTGGGGAAAGGAGTCATTTGAGGACCTACTGAAAGTCTCTAGCTAAAGCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGAAAGGAGTCATTTGAGGACCTACTGAAAGTCTCTAGCTAAAGCT  797

seq1  AATTCGGTCTTGTGCCAGTGTTAGCAATATGAGTATAATCTCTTGGTGAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCGGTCTTGTGCCAGTGTTAGCAATATGAGTATAATCTCTTGGTGAC  847

seq1  ACTGATTAAAACCAGAAGATATTTAGGAGAAGTCAAAGAAAGACATAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATTAAAACCAGAAGATATTTAGGAGAAGTCAAAGAAAGACATAAAA  897

seq1  AGTACTTGTGGACAATTTGGGCATATCCCTAGCAGAGTATGTATATCACC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTGTGGACAATTTGGGCATATCCCTAGCAGAGTATGTATATCACC  947

seq1  ATAGAGATAGCTGTGCATCCACATGTATTGCTGCCCTATTCACACCGTGT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGATAGCTGTGCATCCACATGTATTGCTGCCCTATTCACACCGTGT  997

seq1  AGGAAATGGGATCAACCCAGATGTCCACTAGTAGGTGAATGGCTAATAAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAATGGGATCAACCCAGATGTCCACTAGTAGGTGAATGGCTAATAAA  1047

seq1  AGTGTACAGTGGAATTC  1065
      |||||||||||||||||
seq2  AGTGTACAGTGGAATTC  1064

seq1: chr8_32331587_32333001
seq2: B6Ng01-268I07.g_67_1109

seq1  GAATTCTTCTGTCTGGGTTTGTTTGGCTTTATTTATTTATTGGAAAGCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGTCTGGGTTTGTTTGGCTTTATTTATTTATTGGAAAGCAG  50

seq1  GGAGAGTTGAACCCAAGACCTTGCACATGTTAAGGATTCAGCTGTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTTGAACCCAAGACCTTGCACATGTTAAGGATTCAGCTGTTTCAG  100

seq1  CTCATTTTAGATCTTGGAATGTACTTGCATTGTATGTGTTGAAATCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTTTAGATCTTGGAATGTACTTGCATTGTATGTGTTGAAATCTGCT  150

seq1  TGCTCTTTCGATGGGATATTATGGCACTGCATATTAATATATACCTACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTCGATGGGATATTATGGCACTGCATATTAATATATACCTACCA  200

seq1  CATCACCACCACCACCACCATCACCACCACCACCATCACCATCATCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCACCACCACCACCACCATCACCACCACCACCATCACCATCATCACCA  250

seq1  TCACCACCACCACCACCACCATCATCACCACCACCATCACCATCATCACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACCACCACCACCACCATCATCACCACCACCATCACCATCATCACC  300

seq1  ATCACCACCACCACCATCATCACCACCACTATCACCACCACCACCATCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCACCACCACCATCATCACCACCACTATCACCACCACCACCATCAT  350

seq1  CACCACCACCACCACCATCACCACCACCATCACCATCATCACCATCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCATCACCACCACCATCACCATCATCACCATCACCA  400

seq1  CCACCATCACCATCATCATCATCATCGAATTGCTCACCTAATCTGTTGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCATCACCATCATCATCATCATCGAATTGCTCACCTAATCTGTTGCT  450

seq1  GACTGAGTTATCGAGCTATGGTACTGAGATTACATAGAGAAATTTGACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAGTTATCGAGCTATGGTACTGAGATTACATAGAGAAATTTGACCA  500

seq1  CAGGAAAGGAAGGGAGATACAGCTGTTCTCCAGGATAGCAAGGCATCTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAAGGAAGGGAGATACAGCTGTTCTCCAGGATAGCAAGGCATCTTA  550

seq1  GTTTGGGATGCTATCACAAAGCCTCACAGCCTGAGTGCTTATGGAACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGGATGCTATCACAAAGCCTCACAGCCTGAGTGCTTATGGAACACT  600

seq1  TGTTACAGTTCCTGAGCTGGGAAGCACAAGGTCAAGGCGAGGGAAGCCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACAGTTCCTGAGCTGGGAAGCACAAGGTCAAGGCGAGGGAAGCCCA  650

seq1  CATTGGGTGAGGTCCCCCTCCTGGCTGGTAGATACCTGTTTCCTTGCCGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGGTGAGGTCCCCCTCCTGGCTGGTAGATACCTGTTTCCTTGCCGT  700

seq1  GTCCACACTTGGTGTGGAGAATGAGAGTCCGGTTTCTCTTCCTCTGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCACACTTGGTGTGGAGAATGAGAGTCCGGTTTCTCTTCCTCTGGGAG  750

seq1  GAATACTATTGAAAGCAGGTGTAAACACATGAAAAGATAAAATTATTATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACTATTGAAAGCAGGTGTAAACACATGAAAAGATAAAATTATTATG  800

seq1  CCGTCGTACACCTAGGAAGTGACTCTTCTTCTCTAGTCCACAGAGCCCTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTCGTACACCTAGGAAGTGACTCTTCTTCTCTAGTCCACAGAGCCCTT  850

seq1  TTCTCAGTAAACACAGTCGTAAGATGGAGAAGCAGAGATACAGCAATGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTAAACACAGTCGTAAGATGGAGAAGCAGAGATACAGCAATGGG  900

seq1  -TAAGAAAGGTTCAGGTACAGAGTATA-TCTTTCAAGTATCAGGGCAGGC  948
       ||||||||||||| |||||||||||| |||||||||||||| |||| ||
seq2  TTAAGAAAGGTTCA-GTACAGAGTATATTCTTTCAAGTATCA-GGCA-GC  947

seq1  TTTGCATCGTGGTTCTGCTCAGACCCCGAGTAACGCTCAGGGAGCAGCCG  998
      |||||||||||| |||||||||| ||||||||||||||| ||||||| ||
seq2  TTTGCATCGTGG-TCTGCTCAGA-CCCGAGTAACGCTCA-GGAGCAG-CG  993

seq1  AGCTCCCTAGGCAGAGGACCCAGCTCTTGCCTTCTGTATTCCGTCTCTGC  1048
      ||||||||| ||||||   |||||||||| |||||||||  |||||||||
seq2  AGCTCCCTA-GCAGAG--ACCAGCTCTTG-CTTCTGTAT--CGTCTCTGC  1037

seq1  ATTGTGAGAGTGAATGGAACGGAAGCAGGTGCAGCCAGTGTGCAGCGCCT  1098
      || |||                                            
seq2  ATGGTG--------------------------------------------  1043

seq1  TCCCTCCCAATTTCTGAGGCCTTCTCACTGCTTCACAGCTGACGTACTCG  1148
                                                        
seq2  --------------------------------------------------  1043

seq1  GAATTCCCAATGTCTCACTTTCATTTTCTTTGGCTTCGTCTCTAATGTCT  1198
                                                        
seq2  --------------------------------------------------  1043

seq1  TTGAAGACAAGTTGAGGCATCGTTCAAGAAAAAACTGACTTGGTAATGGC  1248
                                                        
seq2  --------------------------------------------------  1043

seq1  CGGGTTCAAAGGGGCCGAGTTTCATGACTGTTGGGGATTTTATAGCCCCA  1298
                                                        
seq2  --------------------------------------------------  1043

seq1  GTTCTTGAGACAGAAGAAAGTGGAAGTATGTGTTCAGTAAGGATGGGGTT  1348
                                                        
seq2  --------------------------------------------------  1043

seq1  TAACATTGAAACATTGTTTCTTAGTTCATGTGTTAACCTGTCAAATGCCT  1398
                                                        
seq2  --------------------------------------------------  1043

seq1  TCTTTTACTGCATGGTG  1415
                       
seq2  -----------------  1043