BAC Information

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BAC

Clone NameB6Ng01-268P08
Chromosome8 (Build37)
Map Location 41,452,976 - 41,648,855
singlet/doubletdoublet
Overlap gene2900075B16Rik, Zdhhc2, Cnot7, Vps37a, Mtmr7
Upstream geneEG621335, LOC434304, Msr1, EG621431, LOC100039072, LOC666959, EG632166, Fgf20
Downstream geneLOC100039179, Adam24, LOC667019, LOC100039170, LOC436137, Adam25, EG667041, LOC667052, LOC384806, Adam39, LOC384808, EG667077, Slc7a2, Pdgfrl, Mtus1, Fgl1, Pcm1, Asah1, Frg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268P08.bB6Ng01-268P08.g
ACCGA071684GA071685
length1,1341,139
definitionB6Ng01-268P08.b B6Ng01-268P08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(41,452,976 - 41,454,113)(41,647,736 - 41,648,855)
sequence
gaattcttgattctcctgcctcagcctcccaagtgctgggattaaaggca
tgtgaaatcacatctggctcaaaagtcaagtttttgatataaataatcca
agtagcatagaccactttttaaaaagcagctaaagatgggcatctaaggg
gaaatagatgatctactacctacagcattctgattcttagaagaaagtat
ttgacctgtggaggaagaaaaagaagatcctaatgttactagaacaacta
ccctgtgaaagacagggaagaaggcttggaggagtctgtgtgtcttgtag
atgataaatgaaatgcacctgccactagacccatcttttttagaacaccc
tgcttcaagacttctgataagcactttctcagctacacaacatcagacag
acacaaccatttatattactgtcaaaaatggtggccctgcgttatcttct
tacatttcctatgagttgtaatcacttgaatttcctgaattgtgtacttg
aatgtatgaagtagttgtgagctgatgacaaaggaaagaagaggggaaga
ctaatgaagcagtaaagtgggaagctgcataagtaattccatctggtgag
gactgcaacagacacattgggatatgtttatggaaatgtagcttattaag
ttgagtaaagaagagaaaatccggacaaaagccccttctgctccactcca
gcccagggcttcctggccagcggagttgcctgacacccgcaagggcccac
acaagatttcccacgggatcctaagacctctggtgagtggaacacagcgc
cggccccaatccaatcgcgcggaacctgagactgcggtacatagggaagc
agactgcccgggcctgacccggggcaaaagcccctttccgctccactcga
gccccggggcttccttgccagcagagtcacctgacacccgcaagggccca
cacaggattccccacgggatccttaagactgctggtgagtggaacacagc
gccgtcccaatcccaatctcgcggactgagactgcgtacataaggagcat
actgccgggccctgaccggggcaaagtccctttcgctccacttcgagccc
gggcttcttggcagcagagtcgcctgaccccgca
gaattcctcttagatttctgcctagagagaaccatgactttgtgacggtg
atgctgtttattagctattcatccttgtttagtgcctggcattgtgctgt
ggatgcagtagtaagcagtatgaagtcaagcctcttacttacacgagtga
cacacacacacacactcactctcactaatgataaatgctacataatcact
gtctttcccagtgcaagacagctgaagatgcacataagtgagaacagata
gaaattctttcatgctgggcaatggtggcacacgcctttaatcgcagcac
tcgggaggtagagacatgcggatttcttgagtttgaggccagcctggtct
acagagtgagttccaggacagccagggctacacagagaaaccctgtctcg
gaaaactaaaaaagaaaaagaaaagaaattctttcatacagttcctgaca
tagtcttttaccttctcttcatctgaacatattactggcccttttctttt
tatctgcaactttataatttgataaattagaatttatgtacatttccatt
ttagaagaggcctgtagaaaccccagaatttcagtaagatttgtgttgca
ggtgaggtggggacaggtcataaaggtgtgttacatagttcatatagtag
tacatttgttaatttgtggtgatttgaatgttggctttgaaatgtaatga
gaaagaaaaactctctgctagttctaagaaggctgggcctaagtgctgat
tgtgagttctctttagtctgtagccaaacctaatggtcacagtgactgtc
atttcaggcagtttcagaggaaggggcaagtgtgcttgttcactgttctg
acggctgggacagaacggcccaggtgtgctcggtggctagcctgctgctg
gacccttactaccgggactctgaaagggattcatgggtgagtctggcgag
aacctttcctgacctcaggcagacccttgaccagcagtgcacttcatttt
ttagattcttgtcacctttttttttgtctatcagtactgttctttctctt
tagtacatcagcaagattgaatttaaagggggagaaatttggaaacagct
ttggaattcattccaatattggagggatggttgaaacta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_41452976_41454113
seq2: B6Ng01-268P08.b_46_1179

seq1  GAATTCTTGATTCTCCTGCCTCAGCCTCCCAAGTGCTGGGATTAAAGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGATTCTCCTGCCTCAGCCTCCCAAGTGCTGGGATTAAAGGCA  50

seq1  TGTGAAATCACATCTGGCTCAAAAGTCAAGTTTTTGATATAAATAATCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAAATCACATCTGGCTCAAAAGTCAAGTTTTTGATATAAATAATCCA  100

seq1  AGTAGCATAGACCACTTTTTAAAAAGCAGCTAAAGATGGGCATCTAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCATAGACCACTTTTTAAAAAGCAGCTAAAGATGGGCATCTAAGGG  150

seq1  GAAATAGATGATCTACTACCTACAGCATTCTGATTCTTAGAAGAAAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGATGATCTACTACCTACAGCATTCTGATTCTTAGAAGAAAGTAT  200

seq1  TTGACCTGTGGAGGAAGAAAAAGAAGATCCTAATGTTACTAGAACAACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGTGGAGGAAGAAAAAGAAGATCCTAATGTTACTAGAACAACTA  250

seq1  CCCTGTGAAAGACAGGGAAGAAGGCTTGGAGGAGTCTGTGTGTCTTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGAAAGACAGGGAAGAAGGCTTGGAGGAGTCTGTGTGTCTTGTAG  300

seq1  ATGATAAATGAAATGCACCTGCCACTAGACCCATCTTTTTTAGAACACCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAAATGAAATGCACCTGCCACTAGACCCATCTTTTTTAGAACACCC  350

seq1  TGCTTCAAGACTTCTGATAAGCACTTTCTCAGCTACACAACATCAGACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCAAGACTTCTGATAAGCACTTTCTCAGCTACACAACATCAGACAG  400

seq1  ACACAACCATTTATATTACTGTCAAAAATGGTGGCCCTGCGTTATCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACCATTTATATTACTGTCAAAAATGGTGGCCCTGCGTTATCTTCT  450

seq1  TACATTTCCTATGAGTTGTAATCACTTGAATTTCCTGAATTGTGTACTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCCTATGAGTTGTAATCACTTGAATTTCCTGAATTGTGTACTTG  500

seq1  AATGTATGAAGTAGTTGTGAGCTGATGACAAAGGAAAGAAGAGGGGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATGAAGTAGTTGTGAGCTGATGACAAAGGAAAGAAGAGGGGAAGA  550

seq1  CTAATGAAGCAGTAAAGTGGGAAGCTGCATAAGTAATTCCATCTGGTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAGCAGTAAAGTGGGAAGCTGCATAAGTAATTCCATCTGGTGAG  600

seq1  GACTGCAACAGACACATTGGGATATGTTTATGGAAATGTAGCTTATTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCAACAGACACATTGGGATATGTTTATGGAAATGTAGCTTATTAAG  650

seq1  TTGAGTAAAGAAGAGAAAATCCGGACAAAAGCCCCTTCTGCTCCACTCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTAAAGAAGAGAAAATCCGGACAAAAGCCCCTTCTGCTCCACTCCA  700

seq1  GCCCAGGGCTTCCTGGCCAGCGGAGTTGCCTGACACCCGCAAGGGCCCAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGGGCTTCCTGGCCAGCGGAGTTGCCTGACACCCGCAAGGGCCCAC  750

seq1  ACAAGATTTCCCACGGGATCCTAAGACCTCTGGTGAGTGGAACACAGCGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTCCCACGGGATCCTAAGACCTCTGGTGAGTGGAACACAGCGC  800

seq1  CGGCCCCAATCCAATCGCGCGGAACCTGAGACTGCGGTACATAGGGAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCCCAATCCAATCGCGCGGAACCTGAGACTGCGGTACATAGGGAAGC  850

seq1  AGACTGCCCGGGCCTGACCCGGGGCAAAAGCCCC-TTCCGCTCCACTCGA  899
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGACTGCCCGGGCCTGACCCGGGGCAAAAGCCCCTTTCCGCTCCACTCGA  900

seq1  GCCCC-GGGCTTCCTTGCCAGCAGAGTCACCTGACACCCGCAAGGGCCCA  948
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCGGGGCTTCCTTGCCAGCAGAGTCACCTGACACCCGCAAGGGCCCA  950

seq1  CACAGGATTCCCCACGGGATCC-TAAGACTGCTGGTGAGTGGAACACAGC  997
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CACAGGATTCCCCACGGGATCCTTAAGACTGCTGGTGAGTGGAACACAGC  1000

seq1  GCCGGCCCCAATCCAATCTCGCGGACCTGAGACTGCGGTACATAGGGAAG  1047
      |||| ||| |  ||||||||||||| |||||||||| ||||||| || ||
seq2  GCCGTCCCAATCCCAATCTCGCGGA-CTGAGACTGC-GTACATAAGG-AG  1047

seq1  CAGACTGCCCGGGCCTGACCCGGGGCAAAAGCCCCTTCCGCTCCAC-TCG  1096
      || |||||| || ||||| ||||||| |||| ||||| |||||||| |||
seq2  CATACTGCCGGGCCCTGA-CCGGGGC-AAAGTCCCTTTCGCTCCACTTCG  1095

seq1  AGCCCCGGGCTTCCTTGCCAGCAGAGTCGCCTGACACCCGCA  1138
      || ||||||||| |||| ||||||||||||||||| ||||||
seq2  AG-CCCGGGCTT-CTTGGCAGCAGAGTCGCCTGAC-CCCGCA  1134

seq1: chr8_41647736_41648855
seq2: B6Ng01-268P08.g_67_1205 (reverse)

seq1  TAGTTTCAA-CATCC--TCAATATTG--ATGAATTTCAAGCCTGTTTC--  43
      ||||||||| |||||   ||||||||  ||||||| |||  |||||||  
seq2  TAGTTTCAACCATCCCTCCAATATTGGAATGAATTCCAAAGCTGTTTCCA  50

seq1  AATTTCT-CCCCTTTAA--TCAATCTTGCTGATGTACT-AAGAG-AAGAA  88
      ||||||| |||||||||  ||||||||||||||||||| ||||| |||||
seq2  AATTTCTCCCCCTTTAAATTCAATCTTGCTGATGTACTAAAGAGAAAGAA  100

seq1  CAGTACTGATTAGAC-AAAAAAAAGGTGACAAGATTCT-AAAAATGAAGT  136
      ||||||||| ||||| |||||||||||||||||| ||| |||||||||||
seq2  CAGTACTGA-TAGACAAAAAAAAAGGTGACAAGAATCTAAAAAATGAAGT  149

seq1  GCACTGCTGGTCAAGGGTCTGCCTGA-GTCAGG-AAGGTTCTCGCCAGAC  184
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  GCACTGCTGGTCAAGGGTCTGCCTGAGGTCAGGAAAGGTTCTCGCCAGAC  199

seq1  TCA-CCATGAAT-CCTTTCAGAGT-CCGGTAGTAAGGGTCCAGCAGCAGG  231
      ||| |||||||| ||||||||||| |||||||||||||||||||||||||
seq2  TCACCCATGAATCCCTTTCAGAGTCCCGGTAGTAAGGGTCCAGCAGCAGG  249

seq1  CTAGCCACCGAGCACACCTGGGCCGTTCTGTCCCAGCCGTCAGAACAGTG  281
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCACCGAGCACACCTGGGCCGTTCTGTCCCAGCCGTCAGAACAGTG  299

seq1  AACAAGCACACTTGCCCCTTCCTCTGAAACTGCCTGAAATGACAGTCACT  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAGCACACTTGCCCCTTCCTCTGAAACTGCCTGAAATGACAGTCACT  349

seq1  GTGACCATTAGGTTTGGCTACAGACT-AAGAGAACTCACAATCAGCACTT  380
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTGACCATTAGGTTTGGCTACAGACTAAAGAGAACTCACAATCAGCACTT  399

seq1  AGGCCCAGCCTTCTTAGAACTAGCAGAGAGTTTTTCTTTCTCATTACATT  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGCCTTCTTAGAACTAGCAGAGAGTTTTTCTTTCTCATTACATT  449

seq1  TCAAAGCCAACATTCAAATCACCACAAATTAACAAATGTACTACTATATG  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCCAACATTCAAATCACCACAAATTAACAAATGTACTACTATATG  499

seq1  AACTATGTAACACACCTTTATGACCTGTCCCCACCTCACCTGCAACACAA  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATGTAACACACCTTTATGACCTGTCCCCACCTCACCTGCAACACAA  549

seq1  ATCTTACTGAAATTCTGGGGTTTCTACAGGCCTCTTCTAAAATGGAAATG  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTACTGAAATTCTGGGGTTTCTACAGGCCTCTTCTAAAATGGAAATG  599

seq1  TACATAAATTCTAATTTATCAAATTATAAAGTTGCAGATAAAAAGAAAAG  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAATTCTAATTTATCAAATTATAAAGTTGCAGATAAAAAGAAAAG  649

seq1  GGCCAGTAATATGTTCAGATGAAGAGAAGGTAAAAGACTATGTCAGGAAC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGTAATATGTTCAGATGAAGAGAAGGTAAAAGACTATGTCAGGAAC  699

seq1  TGTATGAAAGAATTTCTTTTCTTTTTCTTTTTTAGTTTTCCGAGACAGGG  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGAAAGAATTTCTTTTCTTTTTCTTTTTTAGTTTTCCGAGACAGGG  749

seq1  TTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCT  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCT  799

seq1  GGCCTCAAACTCAAGAAATCCGCATGTCTCTACCTCCCGAGTGCTGCGAT  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAAACTCAAGAAATCCGCATGTCTCTACCTCCCGAGTGCTGCGAT  849

seq1  TAAAGGCGTGTGCCACCATTGCCCAGCATGAAAGAATTTCTATCTGTTCT  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCGTGTGCCACCATTGCCCAGCATGAAAGAATTTCTATCTGTTCT  899

seq1  CACTTATGTGCATCTTCAGCTGTCTTGCACTGGGAAAGACAGTGATTATG  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTATGTGCATCTTCAGCTGTCTTGCACTGGGAAAGACAGTGATTATG  949

seq1  TAGCATTTATCATTAGTGAGAGTGAGTGTGTGTGTGTGTGTCACTCGTGT  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTATCATTAGTGAGAGTGAGTGTGTGTGTGTGTGTCACTCGTGT  999

seq1  AAGTAAGAGGCTTGACTTCATACTGCTTACTACTGCATCCACAGCACAAT  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAGGCTTGACTTCATACTGCTTACTACTGCATCCACAGCACAAT  1049

seq1  GCCAGGCACTAAACAAGGATGAATAGCTAATAAACAGCATCACCGTCACA  1080
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGCACTAAACAAGGATGAATAGCTAATAAACAGCATCACCGTCACA  1099

seq1  AAGTCATGGTTCTCTCTAGGCAGAAATCTAAGAGGAATTC  1120
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCATGGTTCTCTCTAGGCAGAAATCTAAGAGGAATTC  1139