BAC Information

Click to search

BAC

Clone NameB6Ng01-269C16
Chromosome8 (Build37)
Map Location 13,656,991 - 13,658,101
singlet/doubletsinglet
Overlap geneRasa3
Upstream geneTubgcp3, Atp11a, LOC100040229, Mcf2l, F7, F10, Proz, Pcid2, Cul4a, Lamp1, Grtp1, Adprhl1, Dcun1d2, Tmco3, Tfdp1, Atp4b, Grk1, Gm687, Gas6, LOC434282, 1700029H14Rik
Downstream gene4932443I19Rik, LOC665516, Cdc16, Upf3a, AF366264, D8Ertd457e, 2410022L05Rik, EG665536, Fbxo25, LOC100041103, 2610019F03Rik, EG546036, Erich1, Dlgap2, LOC100041140
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269C16.bB6Ng01-269C16.g
ACCGA071837GA071838
length1,1601,103
definitionB6Ng01-269C16.b B6Ng01-269C16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgaaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctacgatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggatcactcctccattgttggtg
ggattgcaagcttgttcaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctctactat
gttcatagcagccttatttataatagccagaaggtggaaagaacccagat
gccgctcaacagaggaatgaatacagaaaatgtggtacatttacacactg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggaccttgagggcatcatactgagtgaggtaacccaatcacaaa
agaactcacatgatatgtattcactgataagtggatgttagcccagaaac
ttagaatacccaagatataagttacaatttgcaaaacacatgaaactcaa
gaacgaagatcaaagtgtggacactttgccccttcttcgaattggtaaca
aaacacccatggaaggagttacaaagtttggagctgagacaaaaggatgg
accatatagagactaccatatccagggttccatcccataatcagcctcca
aacactgacaccatcgcatatactagcaaggttttgctgaaaggaccctg
atatagctgtctcttgtgagactatgccggggcctagcaaacacataagt
ggatgctcacagtcagctattggatggatcacaggggcccccagtgggag
gagctacagaaagtacccaaggagctaaagggatctgcacctataggtag
aacaacattatgaactaactacgaccccggagctcttactctagctgcat
aaggtaatcaaagatggcctagtagccatcactgcaagagagccttgact
gcaaactttatatgcccaatacaggcaacacaaggttcaatggtattggt
gggggatacg
gaattcctgcccatcaggaagcctgacccctatgtccaacgtgaaaaact
gaccacaggtacatcccaagacagtgtgcaaaacacaaagtccacctggt
tccttgcaactgtgtcacctttcagagcttctggctataagacccaactt
ccaatcagaatcagcacgagcccaaacaattggactggcaagatggctcc
atggttaataacgctggctcttccagagggccaggttgattctcagcacc
cacaatgtgattaacaactgtctataactctagttcctgcatatctgata
ttttctcctggcctcgaagggcaatgtattcacgtggtgcacagacattg
catgcacaggaaatgaaaacaaaatcttttttttaaaaaaggttctcaat
atttttttaacgtttaaacagagctaataatcaagatttagagtgttctt
cacttcactgcaatttaaagtaatcgcgtctacctaactgcgcactgctt
gattaaagaagggtcccgcagcccacgggtggccattttctctagctctg
cgccaacagaaccatttcgccctgaatcttgctccctggggtttcatctt
catctcctccttctggaaatgattctctccccgacaccggttctattttt
agctcgcagaaccagagccttcacccagtggagactcatttactgtccaa
ccagcaagtgaccttaatcttctgtgaattacaatcaactggacaggaaa
tccccagctcggacgtccaccagtccatctaagaaacgacctcctggggc
tccaggcctgactaaggaccccaaatcccaccaagcccaggcaaaaagaa
aggcagagggcgggagaagtcagtatgtgtaaggagacagtgccatggtt
acatggggctcacagcggcagacaccgtgctctgtcaaagtgtcccggtg
tagaagggttttcctgcatctgcctgttgcatagcttgggaatctgaccc
tctcactgtcaacctgctggaggagaggtggtgtggtctctctcgtctcc
tcccacatccagtgtgagctctggacggtttcctggccaatcctgttata
tac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_13656991_13658101
seq2: B6Ng01-269C16.g_66_1168

seq1  GAATTCCTGCCCATCAGGAAGCCTGACCCCTATGTCCAACGTGAAAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCCATCAGGAAGCCTGACCCCTATGTCCAACGTGAAAAACT  50

seq1  GACCACAGGTACATCCCAAGACAGTGTGCAAAACACAAAGTCCACCTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACAGGTACATCCCAAGACAGTGTGCAAAACACAAAGTCCACCTGGT  100

seq1  TCCTTGCAACTGTGTCACCTTTCAGAGCTTCTGGCTATAAGACCCAACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGCAACTGTGTCACCTTTCAGAGCTTCTGGCTATAAGACCCAACTT  150

seq1  CCAATCAGAATCAGCACGAGCCCAAACAATTGGACTGGCAAGATGGCTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGAATCAGCACGAGCCCAAACAATTGGACTGGCAAGATGGCTCC  200

seq1  ATGGTTAATAACGCTGGCTCTTCCAGAGGGCCAGGTTGATTCTCAGCACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTAATAACGCTGGCTCTTCCAGAGGGCCAGGTTGATTCTCAGCACC  250

seq1  CACAATGTGATTAACAACTGTCTATAACTCTAGTTCCTGCATATCTGATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATGTGATTAACAACTGTCTATAACTCTAGTTCCTGCATATCTGATA  300

seq1  TTTTCTCCTGGCCTCGAAGGGCAATGTATTCACGTGGTGCACAGACATTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCCTGGCCTCGAAGGGCAATGTATTCACGTGGTGCACAGACATTG  350

seq1  CATGCACAGGAAATGAAAACAAAATCTTTTTTTTAAAAAAGGTTCTCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACAGGAAATGAAAACAAAATCTTTTTTTTAAAAAAGGTTCTCAAT  400

seq1  ATTTTTTTAACGTTTAAACAGAGCTAATAATCAAGATTTAGAGTGTTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTTAACGTTTAAACAGAGCTAATAATCAAGATTTAGAGTGTTCTT  450

seq1  CACTTCACTGCAATTTAAAGTAATCGCGTCTACCTAACTGCGCACTGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCACTGCAATTTAAAGTAATCGCGTCTACCTAACTGCGCACTGCTT  500

seq1  GATTAAAGAAGGGTCCCGCAGCCCACGGGTGGCCATTTTCTCTAGCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGAAGGGTCCCGCAGCCCACGGGTGGCCATTTTCTCTAGCTCTG  550

seq1  CGCCAACAGAACCATTTCGCCCTGAATCTTGCTCCCTGGGGTTTCATCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAACAGAACCATTTCGCCCTGAATCTTGCTCCCTGGGGTTTCATCTT  600

seq1  CATCTCCTCCTTCTGGAAATGATTCTCTCCCCGACACCGGTTCTATTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCTCCTTCTGGAAATGATTCTCTCCCCGACACCGGTTCTATTTTT  650

seq1  AGCTCGCAGAACCAGAGCCTTCACCCAGTGGAGACTCATTTACTGTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCGCAGAACCAGAGCCTTCACCCAGTGGAGACTCATTTACTGTCCAA  700

seq1  CCAGCAAGTGACCTTAATCTTCTGTGAATTACAATCAACTGGACAGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAAGTGACCTTAATCTTCTGTGAATTACAATCAACTGGACAGGAAA  750

seq1  TCCCCAGCTCGGACGTCCACCAGTCCATCTAAGAAACGACCTCCTGGGGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCTCGGACGTCCACCAGTCCATCTAAGAAACGACCTCCTGGGGC  800

seq1  TCCAGGCCTGACTAAGGACCCCAAATCCCACCAAGCCCAGGCAAAAAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCCTGACTAAGGACCCCAAATCCCACCAAGCCCAGGCAAAAAGAA  850

seq1  AGGCAGAGGGC-GGAGAAGTCAGTATGTGTAAGGAGACAGTGCCATGGTT  899
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAGGGCGGGAGAAGTCAGTATGTGTAAGGAGACAGTGCCATGGTT  900

seq1  ACATGGGGCTCACAGCGGCAGACACCGTGCTCTGTCAAAGGTGTCCCGGT  949
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACATGGGGCTCACAGCGGCAGACACCGTGCTCTGTCAAA-GTGTCCCGGT  949

seq1  GTAGAAGGGTTTTCCTGCATCTTGCCTGTTGCATAGGCTTTGGAATCTGA  999
      ||||||||||||||||||||| ||||||||||||| |||| |||||||||
seq2  GTAGAAGGGTTTTCCTGCATC-TGCCTGTTGCATA-GCTTGGGAATCTGA  997

seq1  CCTTCTCACCTGTCAACCTGCTGGAGGAGAGGTGGTGTGTGTCTTCTCTC  1049
      || ||||| ||||||||||||||||||||||||||||||     ||||||
seq2  CCCTCTCA-CTGTCAACCTGCTGGAGGAGAGGTGGTGTG----GTCTCTC  1042

seq1  CCTCCTCCTCCCCACACCCAGTGTGAGGCTCTGGACGGTTTCCTTGGC-A  1098
       |  ||||| |||||| ||||||||| ||||||||||||||||| | | |
seq2  TCGTCTCCT-CCCACATCCAGTGTGA-GCTCTGGACGGTTTCCTGGCCAA  1090

seq1  TTCTGTTATATAC  1111
      | |||||||||||
seq2  TCCTGTTATATAC  1103