BAC Information

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BAC

Clone NameB6Ng01-269N10
Chromosome8 (Build37)
Map Location 38,325,238 - 38,326,294
singlet/doubletsinglet
Overlap genenone
Upstream geneEG544878, 6430573F11Rik, Dlc1, LOC100042892, A730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121
Downstream geneLOC621149, Sgcz
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269N10.bB6Ng01-269N10.g
ACCGA072331GA072332
length1,060325
definitionB6Ng01-269N10.b B6Ng01-269N10.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcatgtttacttctgaagtgctaattacttaaaagaaataagaa
tgagaatgcactacttttctcaaaattgtgacaaatgtacttgaggatgg
cttattttggttcatagtgggaggggatagatagcataactgggatggga
gatatcttgatggctggagcaggagatagctggtcacacagtgctctaac
tcaagatgcagaatgagatgaacactggaacctagctctatttctccctt
ttgcttaggtccagcatcccagcccgaaggctgttactatccagattctg
ggtaaatagaaacatctttctatacacacttagaaatgggttgccatggt
gattctatatcctgtcaagttgacagtgaagataaattctcacaaacaga
aaccttaaagtcatttgttttcttaagtctcttattccacagtatgggct
gtgacattttaagaatttggaacattaatcattagtacaactcatgttgt
caatatgatccatactttcatatcacattaactgtataactgactatatt
tgatgtcttatcattctatttcttgaaattaagttcattattatgtaaac
aatttatctactaggttttttcttttcatatattcagacttccctacaca
cacacacacacacacacacacacacacacacacacacacacacacacaca
cactcaaccctttaaaattttggcacttattcatagttacttttgtatta
aattaaatattgacttgtgaatagaaaagtagtaggtatcacagaaaaca
gtacaaatcaataaataaatctaacattaatggggcaaaatcttatgaag
atactatattacttttttacagttatataacattgttattttgtgtgtct
actggactcccgtgactgacaaaaccaaaatgactttttttatgcccagc
actgggagatttttcttagatagactacatattctgggagcagagtaata
actccaagtggcatgaaattcgtctcaatctacctatactctcataccac
attcatgtac

cacaggaaaactaacagagtcacctaacctggactgttgtggattcccag
accctgaatcactaatcaaagagtgagcacaagctggacctaggacctct
gaacatatggagcagatgaacagcttggtcttcatgaaagtctcccaaac
accggaagctgggattgtccataattccttggcctgcctgcatgcatgca
tgcctgcatgcatgcctgcctgtagattccttgcccctaaatggacagcc
ttgtttggcctcagtggtagaggatgcacttattttcacagcaacataat
gtgtgtgtgttggaggagggggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38325238_38326294
seq2: B6Ng01-269N10.b_45_1104

seq1  GAATTCTCATGTTTACTTCTGAAGTGCTAATTACTTAAAAGAAATAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGTTTACTTCTGAAGTGCTAATTACTTAAAAGAAATAAGAA  50

seq1  TGAGAATGCACTACTTTTCTCAAAATTGTGACAAATGTACTTGAGGATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGCACTACTTTTCTCAAAATTGTGACAAATGTACTTGAGGATGG  100

seq1  CTTATTTTGGTTCATAGTGGGAGGGGATAGATAGCATAACTGGGATGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTTGGTTCATAGTGGGAGGGGATAGATAGCATAACTGGGATGGGA  150

seq1  GATATCTTGATGGCTGGAGCAGGAGATAGCTGGTCACACAGTGCTCTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTTGATGGCTGGAGCAGGAGATAGCTGGTCACACAGTGCTCTAAC  200

seq1  TCAAGATGCAGAATGAGATGAACACTGGAACCTAGCTCTATTTCTCCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGATGCAGAATGAGATGAACACTGGAACCTAGCTCTATTTCTCCCTT  250

seq1  TTGCTTAGGTCCAGCATCCCAGCCCGAAGGCTGTTACTATCCAGATTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTAGGTCCAGCATCCCAGCCCGAAGGCTGTTACTATCCAGATTCTG  300

seq1  GGTAAATAGAAACATCTTTCTATACACACTTAGAAATGGGTTGCCATGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAATAGAAACATCTTTCTATACACACTTAGAAATGGGTTGCCATGGT  350

seq1  GATTCTATATCCTGTCAAGTTGACAGTGAAGATAAATTCTCACAAACAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTATATCCTGTCAAGTTGACAGTGAAGATAAATTCTCACAAACAGA  400

seq1  AACCTTAAAGTCATTTGTTTTCTTAAGTCTCTTATTCCACAGTATGGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTAAAGTCATTTGTTTTCTTAAGTCTCTTATTCCACAGTATGGGCT  450

seq1  GTGACATTTTAAGAATTTGGAACATTAATCATTAGTACAACTCATGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACATTTTAAGAATTTGGAACATTAATCATTAGTACAACTCATGTTGT  500

seq1  CAATATGATCCATACTTTCATATCACATTAACTGTATAACTGACTATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATGATCCATACTTTCATATCACATTAACTGTATAACTGACTATATT  550

seq1  TGATGTCTTATCATTCTATTTCTTGAAATTAAGTTCATTATTATGTAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTCTTATCATTCTATTTCTTGAAATTAAGTTCATTATTATGTAAAC  600

seq1  AATTTATCTACTAGGTTTTTTCTTTTCATATATTCAGACTTCCCTACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTATCTACTAGGTTTTTTCTTTTCATATATTCAGACTTCCCTACACA  650

seq1  CACACACACACACACACACACACACACACACACACACACACACACACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACACACACACA  700

seq1  CACTCAACCCTTTAAAATTTTGGCACTTATTCATAGTTACTTTTGTATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAACCCTTTAAAATTTTGGCACTTATTCATAGTTACTTTTGTATTA  750

seq1  AATTAAATATTGACTTTTGAATAGAAAAGTAGTAGGTATCACAGAAAACA  800
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AATTAAATATTGACTTGTGAATAGAAAAGTAGTAGGTATCACAGAAAACA  800

seq1  GTACAAATCAAATAAATAAATCTAACATTAGTTGGGCAAAATCTTAATGA  850
      ||||||||| |||||||||||||||||||| | |||||||||||| ||||
seq2  GTACAAATC-AATAAATAAATCTAACATTAATGGGGCAAAATCTT-ATGA  848

seq1  AGATACTATATTAC-TTTTTACAGTTATATAACATTATTATTTTGTGTGT  899
      |||||||||||||| ||||||||||||||||||||| |||||||||||||
seq2  AGATACTATATTACTTTTTTACAGTTATATAACATTGTTATTTTGTGTGT  898

seq1  CTACTGGACTCCCCTGACTGAC-AAACCAAAATGAC-TTTTTCATGCCCA  947
      ||||||||||||| |||||||| ||||||||||||| ||||| |||||||
seq2  CTACTGGACTCCCGTGACTGACAAAACCAAAATGACTTTTTTTATGCCCA  948

seq1  GCACTGGG-GA-TTTTCTTAGATAGTCTACATATTTTGGGAGCAAGAGTT  995
      |||||||| || ||||||||||||| ||||||||| ||||||| ||||| 
seq2  GCACTGGGAGATTTTTCTTAGATAGACTACATATTCTGGGAGC-AGAGTA  997

seq1  ATTACTCCAAGTGGCATG-AATTC-TCTTAATTTACCTATACATGTTCAT  1043
      || ||||||||||||||| ||||| ||| ||| |||||||||    ||||
seq2  ATAACTCCAAGTGGCATGAAATTCGTCTCAATCTACCTATAC--TCTCAT  1045

seq1  A-CACATTCATGTAC  1057
      | |||||||||||||
seq2  ACCACATTCATGTAC  1060


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