BAC Information

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BAC

Clone NameB6Ng01-270P10
Chromosome8 (Build37)
Map Location 131,404,145 - 131,405,281
singlet/doubletsinglet
Overlap geneLOC100042659
Upstream geneNrp1, LOC668494, Itgb1
Downstream geneLOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270P10.bB6Ng01-270P10.g
ACCGA073169GA073170
length1,1801,117
definitionB6Ng01-270P10.b B6Ng01-270P10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaaaatgaaggcacaacgtacccaaacttaggcgatacaat
gaaagcagtgctaagaggaaagttcatagcactaagtgccttcataaaga
aattggagagatctcatactagcaacttaacagcatacctgaaagctcta
gaacaaaaagaagcaaacacacctaagaggagtaaacagtagggaaaaaa
aaaaaaaatcaaacccagggtggaaatcaatcaattagaaacaaagagaa
caattcaaagaatcaacaaaaccaagagctggttctttggggaaaaaaaa
aaaacccaacaagataaactcatagccaaattaagagtcagagagacaat
atccaaattatcaaaatcagaaaggaaaaggggaacataataacagatat
taaggaaatccaaagaatccttaggtcttacttcaaaagccatactccaa
aaaattgaaaaatctacaagaaatggatgattcccttgatagattctatt
taccaaagttaaatcaggatcaggtaaacaacctaaatagtactacaacc
tctaaggaaatagaatcaatcattaaaagtttcccaaacaaaaaaagccc
aggaccagatggcttcgatgtaggattctaccagactttcaaagaagagc
taataccaataatcttatacaaaaaagagaaacaaaagaaacagtgccaa
actctattctatgaggccacagtcacccttgatacctaaaccacgcaaag
attcaacaaggaaagaaaatttcagaccaatttcccttattgacattgat
gccaaaataatacaatacttgcaaaccaaataaaaaagatcatccaccat
gattaagtaggattcatcccgtggatgcagaggtggttctatgtatggaa
acccatcaatataatccaccatataaacaaactgaaagaaaaaaatcaca
tgatcatctcattagatgccaaaaaggccttggacagaatccaggacctc
ttcatcttcaagtcttgcgagatctgggatcaaggtgcatactagaccca
taaaacattatatagcagcttagagtccacatcataaatggagagaaact
agcagtccacttaaatcagtacagacagtggctatctctcgtttctctta
caaaaggatactggcgtgtttcttagccct
gaattcttttggacaagaatagatagaagtcaaaatgaataaactgggca
aacaatgaccattggattctgggtgttattttcatgctcaggaactgcta
tgaaaggctgtgcactctcgtgaatactgtgctcatctttcctcatctcc
ctatgggtgggacatcttagtgttcagaaattctccaactcgtgtggctt
ttttttctccttagcaattcctgtagaacaccctaaaaaggaagcatcac
cggacaatctatttcctgagaagaaactttatataactagagccccgact
cagaccaagaaacagtaccctccttgggacgctaaggcagagagtaagta
gacctcttttacgttatattttgtaaagacttacttattttgtatatgtg
agtacactgtagctgtcctcagacacaccagaagaaagcattggatacca
tgacagatggttttgagccactatgtggttgctggaaattgaactcagga
agagcagtcagtgctcttaactgctgagccatctctccagccccctttta
tgttattttaaattaaacttaagaaaccttcttattgagtttgagaatag
accttcagccatgtgcttctttgaactattatgcacaaatagtgctgaca
gtactcccaaatcttctgacaatctaggtatcatttgtaactaactgttg
gcttgcctgtggccacattttaaatttgcgtttcttattgtagtatcaag
ttctgctttgatcttaggatgctgtagggtttttttatatatacatattt
caaagattcacctcttcaaggtcagagaatattgttctactaaagggact
catcattttgatagttttcttcatttctcttaacaacttccttatttgtt
attaatgtggctcagtacactttcttctagttattctctgaatggcattt
tgtctctattgcttaatttcttctgtttactattcatgttttcttagaag
aaactttgtatgtgcttttgtactcatctgatacttctatctattaaggc
tctaaggtatgtgtagcaagtgtgatattccgtttcaaaaatttagatta
aaaaactaggtatgagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131404145_131405281
seq2: B6Ng01-270P10.g_65_1181 (reverse)

seq1  ACTCATACACATAATTTTTTTTAAATCTTAAAAATTTTTGAAAAGGAATA  50
      ||||||  || || ||||||   |||||   |||||||||||| ||||||
seq2  ACTCAT--ACCTAGTTTTTT---AATCT---AAATTTTTGAAACGGAATA  42

seq1  TCCACAATTTGGCTACACATACCCTTAAGAG-CTTATTAAGATAGAAGTA  99
      | |||| ||  ||||||||||||  | |||| |||| | |||||||||||
seq2  T-CACACTT--GCTACACATACC--TTAGAGCCTTAAT-AGATAGAAGTA  86

seq1  TCAGAATGAGTACAAAAGCACATACAAAGTTTCTTCTAAGAAAAACAATG  149
      |||| |||||||||||||||||||||||||||||||||||||||   |||
seq2  TCAG-ATGAGTACAAAAGCACATACAAAGTTTCTTCTAAGAAAA--CATG  133

seq1  AAATAGTAAAACAGAAGAAAATTAAAGCAATAGAGACAAAATGCCATTCA  199
       |||||| ||||||||||||  | ||||||||||||||||||||||||||
seq2  -AATAGT-AAACAGAAGAAA--TTAAGCAATAGAGACAAAATGCCATTCA  179

seq1  GAGAATAACTAGAAGAAAGTGTACTGAGCCACATTAATAACAAATAAGGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATAACTAGAAGAAAGTGTACTGAGCCACATTAATAACAAATAAGGA  229

seq1  AGTTGTTAAGAGAAATGAAGAAAACTATCAAAATGATGAGTCCCTTTAGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTAAGAGAAATGAAGAAAACTATCAAAATGATGAGTCCCTTTAGT  279

seq1  AGAACAATATTCTCTGACCTTGAAGAGGTGAATCTTTGAAATATGTATAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAATATTCTCTGACCTTGAAGAGGTGAATCTTTGAAATATGTATAT  329

seq1  ATAAAAAAACCCTACAGCATCCTAAGATCAAAGCAGAACTTGATACTACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAAACCCTACAGCATCCTAAGATCAAAGCAGAACTTGATACTACA  379

seq1  ATAAGAAACGCAAATTTAAAATGTGGCCACAGGCAAGCCAACAGTTAGTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGAAACGCAAATTTAAAATGTGGCCACAGGCAAGCCAACAGTTAGTT  429

seq1  ACAAATGATACCTAGATTGTCAGAAGATTTGGGAGTACTGTCAGCACTAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGATACCTAGATTGTCAGAAGATTTGGGAGTACTGTCAGCACTAT  479

seq1  TTGTGCATAATAGTTCAAAGAAGCACATGGCTGAAGGTCTATTCTCAAAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGCATAATAGTTCAAAGAAGCACATGGCTGAAGGTCTATTCTCAAAC  529

seq1  TCAATAAGAAGGTTTCTTAAGTTTAATTTAAAATAACATAAAAGGGGGCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAGAAGGTTTCTTAAGTTTAATTTAAAATAACATAAAAGGGGGCT  579

seq1  GGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCTGAGTTCAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGATGGCTCAGCAGTTAAGAGCACTGACTGCTCTTCCTGAGTTCAA  629

seq1  TTTCCAGCAACCACATAGTGGCTCAAAACCATCTGTCATGGTATCCAATG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGCAACCACATAGTGGCTCAAAACCATCTGTCATGGTATCCAATG  679

seq1  CTTTCTTCTGGTGTGTCTGAGGACAGCTACAGTGTACTCACATATACAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTCTGGTGTGTCTGAGGACAGCTACAGTGTACTCACATATACAAA  729

seq1  ATAAGTAAGTCTTTACAAAATATAACGTAAAAGAGGTCTACTTACTCTCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAGTCTTTACAAAATATAACGTAAAAGAGGTCTACTTACTCTCT  779

seq1  GCCTTAGCGTCCCAAGGAGGGTACTGTTTCTTGGTCTGAGTCGGGGCTCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTAGCGTCCCAAGGAGGGTACTGTTTCTTGGTCTGAGTCGGGGCTCT  829

seq1  AGTTATATAAAGTTTCTTCTCAGGAAATAGATTGTCCGGTGATGCTTCCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATATAAAGTTTCTTCTCAGGAAATAGATTGTCCGGTGATGCTTCCT  879

seq1  TTTTAGGGTGTTCTACAGGAATTGCTAAGGAGAAAAAAAAGCCACACGAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAGGGTGTTCTACAGGAATTGCTAAGGAGAAAAAAAAGCCACACGAG  929

seq1  TTGGAGAATTTCTGAACACTAAGATGTCCCACCCATAGGGAGATGAGGAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGAATTTCTGAACACTAAGATGTCCCACCCATAGGGAGATGAGGAA  979

seq1  AGATGAGCACAGTATTCACGAGAGTGCACAGCCTTTCATAGCAGTTCCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCACAGTATTCACGAGAGTGCACAGCCTTTCATAGCAGTTCCTG  1029

seq1  AGCATGAAAATAACACCCAGAATCCAATGGTCATTGTTTGCCCAGTTTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGAAAATAACACCCAGAATCCAATGGTCATTGTTTGCCCAGTTTAT  1079

seq1  TCATTTTGACTTCTATCTATTCTTGTCCAAAAGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTGACTTCTATCTATTCTTGTCCAAAAGAATTC  1117