BAC Information

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BAC

Clone NameB6Ng01-272O12
Chromosome8 (Build37)
Map Location 71,728,632 - 71,729,786
singlet/doubletsinglet
Overlap genenone
Upstream geneSh2d4a, LOC665510, 4732435N03Rik, Ints10, Lpl, LOC100041138, Slc18a1, Atp6v1b2, Lzts1, EG665540
Downstream geneD10627, LOC665553, D130040H23Rik, LOC665561, LOC670593, EG665578, LOC622336, LOC100041482, LOC673968, AI449175, EG636741, 1200003I07Rik, D330038O06Rik, Atp13a1, Gmip, Edg4, Pbx4, Cilp2, BC028663, Ndufa13, Tssk6, Gatad2a, LOC665649, 9130404D08Rik, Sf4, Tm6sf2, Hapln4, Ncan, Rfxank, 2310073E15Rik, 2310045N01Rik, Mef2b, Tmem161a, Slc25a42
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272O12.bB6Ng01-272O12.g
ACCGA074615GA074616
length1,1501,155
definitionB6Ng01-272O12.b B6Ng01-272O12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctttctgtaatggaaactctgacatctgccttaattggtaaca
ttgtttcttttctaaataaacctatgtagcaatcactgttgataggtata
ccccaaatctaccaaagttataattgtctgacattaccttgaaattttca
ctttggaaaaataatcttcccaggacatatagcaataagacaggatgtga
tacccgtggtttccctttgaagtcctaaatagaagttacaactaagataa
gcaatggttgacaagttggaccacacttcaggagtgcaggctggctatag
atatgatgctgaaactttgctttgaagattaaatgtaagactattacata
caacatcacaaaaatagagcattggtagatagaagtatggctaatattct
gtggcattgtatgttggaaacataacagtctcatttaagattatggtaga
atttggtcagctacaaaatctctgtcactatctaagagttgaaggaagat
gtgttgattaaaaaaaaaatggcttccatagtcttatttgtttcccagtt
ggtggaactcttagggaaggattacaggtgtggcctttttgaaggaggtg
tatcatggggctgggcttattggctatgaatgcctctggccatgcccagt
gtattctctacctcatacctaaggttcaaactgtgagctctcaggtcttc
ctgctgttatgtgtttattatgtgagcaacgtctctgactctggatctat
aagcccaatactttcttttataaattggcttggtcctggttgagttttat
aatagcaagagaaaggtaactatacagaagtgttctgtggaagatcagaa
cacagaaaaatctccccttccaagtagaggaacccaggaagggtgtgttt
taactgtagctctagagcagaggtcttacactctcccaattcccccatgc
tccttttcctctattatttagttttgttcttctttcctgtgtgtgtgtgt
gtgtttgtgtggggagtgttatacagcaccaggcttccctcaaatttaca
gtaaattttttcttgctctgtgacctgctgctggattaagaatgccaaaa
cgacacaagcctgaaaaaatagcttatggtgaccaggggttaccctcacc

gaattcttcttggtagatttttcctttgatgagtatgaagtgtccttcct
tatcttttttgatgacttttggttggaagttgattttatttgatattaga
atggccactccagcttgtttcttgggaccactgcttggaaaattgttttc
tagccctttactctgaggtagtgtttgtctttgacactgaggttcatttc
ctgtatgcagcaaaatgctgggttttttttacatttccaggttgttagtc
tatgtctttttattggggaattgattccattgatgttaagagatattaag
aaatagtgattgttgcttcctgttatttttgatgttatttttatgtttgt
atggttatcttcttttgggtttgttgaaacaagattactttcttgctttt
tctagagtgtaatttccctccttgtgttggtgttttccatctattattct
ttgtagggctggatttgtggaaagatattgtgtaactttgggtttttttg
ttttttttgtttttttttttcatggaaaatcttggtttcttcatctacag
taattggaagttttgctcagtatagtagcctgggctggcatttgtgttct
cttagggtctgtatggcatctgcccaggatcttctagctttcatagtctc
tgatgagatgtctggtgtaattctgcctttatatgttacttaaccttttt
tccttactgcttttaatactctttctttgttttgtgcatttggtgttttg
aaattatgtgacaagaggaatttctattctggtcaaatctatttggagtt
ctataggcttcttgtatgttcatgggcatctctttctttaggtttacaga
agttttttttttctatatttttgttgaagattattactggccctttaagt
tgggaatctttgctctcttctataaccttattatccctaggtttggactt
cctattgtgtctggatttctggatgttttgagtagagtttttgcatttgc
atctcttgatgtgtgtcaatattttctatggtatctttcggcacctgaag
attcctctattcatactttgtatcgtgggatggctttgcaactatggacc
tctgaactcgtaatcaaattctaatctccaagggcgatctcccctttgga
tgaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_71728632_71729786
seq2: B6Ng01-272O12.b_48_1197

seq1  GAATTCTCTTTCTGTAATGGAAACTCTGACATCTGCCTTAATTGGTAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTTCTGTAATGGAAACTCTGACATCTGCCTTAATTGGTAACA  50

seq1  TTGTTTCTTTTCTAAATAAACCTATGTAGCAATCACTGTTGATAGGTATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCTTTTCTAAATAAACCTATGTAGCAATCACTGTTGATAGGTATA  100

seq1  CCCCAAATCTACCAAAGTTATAATTGTCTGACATTACCTTGAAATTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATCTACCAAAGTTATAATTGTCTGACATTACCTTGAAATTTTCA  150

seq1  CTTTGGAAAAATAATCTTCCCAGGACATATAGCAATAAGACAGGATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAAAAATAATCTTCCCAGGACATATAGCAATAAGACAGGATGTGA  200

seq1  TACCCGTGGTTTCCCTTTGAAGTCCTAAATAGAAGTTACAACTAAGATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCGTGGTTTCCCTTTGAAGTCCTAAATAGAAGTTACAACTAAGATAA  250

seq1  GCAATGGTTGACAAGTTGGACCACACTTCAGGAGTGCAGGCTGGCTATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATGGTTGACAAGTTGGACCACACTTCAGGAGTGCAGGCTGGCTATAG  300

seq1  ATATGATGCTGAAACTTTGCTTTGAAGATTAAATGTAAGACTATTACATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATGCTGAAACTTTGCTTTGAAGATTAAATGTAAGACTATTACATA  350

seq1  CAACATCACAAAAATAGAGCATTGGTAGATAGAAGTATGGCTAATATTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATCACAAAAATAGAGCATTGGTAGATAGAAGTATGGCTAATATTCT  400

seq1  GTGGCATTGTATGTTGGAAACATAACAGTCTCATTTAAGATTATGGTAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCATTGTATGTTGGAAACATAACAGTCTCATTTAAGATTATGGTAGA  450

seq1  ATTTGGTCAGCTACAAAATCTCTGTCACTATCTAAGAGTTGAAGGAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTCAGCTACAAAATCTCTGTCACTATCTAAGAGTTGAAGGAAGAT  500

seq1  GTGTTGATTAAAAAAAAAATGGCTTCCATAGTCTTATTTGTTTCCCAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTGATTAAAAAAAAAATGGCTTCCATAGTCTTATTTGTTTCCCAGTT  550

seq1  GGTGGAACTCTTAGGGAAGGATTACAGGTGTGGCCTTTTTGAAGGAGGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAACTCTTAGGGAAGGATTACAGGTGTGGCCTTTTTGAAGGAGGTG  600

seq1  TATCATGGGGCTGGGCTTATTGGCTATGAATGCCTCTGGCCATGCCCAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGGGGCTGGGCTTATTGGCTATGAATGCCTCTGGCCATGCCCAGT  650

seq1  GTATTCTCTACCTCATACCTAAGGTTCAAACTGTGAGCTCTCAGGTCTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTCTACCTCATACCTAAGGTTCAAACTGTGAGCTCTCAGGTCTTC  700

seq1  CTGCTGTTATGTGTTTATTATGTGAGCAACGTCTCTGACTCTGGATCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTTATGTGTTTATTATGTGAGCAACGTCTCTGACTCTGGATCTAT  750

seq1  AAGCCCAATACTTTCTTTTATAAATTGGCTTGGTCCTGGTTGAGTTTTAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCAATACTTTCTTTTATAAATTGGCTTGGTCCTGGTTGAGTTTTAT  800

seq1  AATAGCAAGAGAAAGGTAACTATACAGAAGTGTTCTGTGGAAGATCAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCAAGAGAAAGGTAACTATACAGAAGTGTTCTGTGGAAGATCAGAA  850

seq1  CACAGAAAAATCTCCCCTTCCAAGTAGAGGAACCCAGGAAGGGGTGTGTT  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CACAGAAAAATCTCCCCTTCCAAGTAGAGGAACCCAGGAA-GGGTGTGTT  899

seq1  TTAACTGTAGCTCTAGAGCAGAGGTCTTACACTCTCCCAATTCCCCCATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGTAGCTCTAGAGCAGAGGTCTTACACTCTCCCAATTCCCCCATG  949

seq1  CTCCTTTTCCTCTATTATTTAGTTTTGTTCTTCTTTCCTTGTGTGTGTGT  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CTCCTTTTCCTCTATTATTTAGTTTTGTTCTTCTTTCC-TGTGTGTGTGT  998

seq1  GTGTGTTTGTGT-GTGAGTGTTATATAGCA-CAGGCTTTCCTCAAAATTA  1048
      |||||||||||| | |||||||||| |||| ||||||| ||||||| |||
seq2  GTGTGTTTGTGTGGGGAGTGTTATACAGCACCAGGCTTCCCTCAAATTTA  1048

seq1  CAGTAA--TTTTTCTGCCTCTGTGACCTGCTTGCTGGGATTAAAGGAATG  1096
      ||||||  |||||||  ||||||||||||| |||| |||||||  |||||
seq2  CAGTAAATTTTTTCTTGCTCTGTGACCTGC-TGCT-GGATTAA--GAATG  1094

seq1  -CAAAACCACACCAAGCTTGAAAAAAATAAGCTTTATGGTG-CCAGGTGT  1144
       |||||| ||| ||||| ||||||||   ||| |||||||| ||||| ||
seq2  CCAAAACGACA-CAAGCCTGAAAAAA--TAGC-TTATGGTGACCAGGGGT  1140

seq1  CTCCCCTCACC  1155
       | ||||||||
seq2  -TACCCTCACC  1150