BAC Information

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BAC

Clone NameB6Ng01-273G05
Chromosome8 (Build37)
Map Location 15,097,457 - 15,200,170
singlet/doubletdoublet
Overlap geneMyom2, EG665599
Upstream geneDlgap2, LOC100041140, C030037F17Rik, Cln8, Arhgef10, 2900016B01Rik, 5830468F06Rik, Kbtbd11, BB014433
Downstream geneEG234097, EG665619, LOC634008, Csmd1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273G05.bB6Ng01-273G05.g
ACCGA074973GA074974
length1,1111,126
definitionB6Ng01-273G05.b B6Ng01-273G05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,097,457 - 15,098,571)(15,199,042 - 15,200,170)
sequence
gaattcaaacacaaatttttaccacctcacatgtacttaaaaaacttagc
taggtgagaggggatgtaggtataccagatgtctttgatcataaatatct
cttgacagttatttgcaaagggctcatcaccatctctgttaaagtttaaa
taaacaggcacagattgcaccacttgcaatgtgtatagatctttggagga
aggaaagagcagcagccttaggaactaatgtaagacttcagtactcggta
tggagacaccagcaaggtgcggtctgtgtcggtgccttggcaacgttgcc
tgctgccttcacaaaggcaagatcctggtttggaagatttcttctagaaa
aatcctttcctctttcctgtagaaaatctagaggacttttggatgggact
tttaggaactattgttttgttaatttttttaaaatcagaaataaaaatcg
agtgatctttagtggagtgcttttgctttgaatttgtcaaaaaagatcct
gagatctgtttgtcttctgagaggaaatgaccaactgtggcaggccacac
cagggaagtttttgttttgttttgttttgttttttgaaataaaaagctat
tttattttatgtgtaagaatattttgcctgctatgtgtatatatatatca
catgtgtgagtgttgcactcagaggccagaggagggcactggttcccctg
aaactggagtgatagccaccatagagaagctagggaccaaacaaacccag
gtcctctggaaaaacagccattgctcttaatttgtgtagccatctctcca
gctcatcagaacagacctggactccgctggggagtgctaagtgtccccat
acagcactcattccattcttttttttttttaaacaggtgatgttcagatt
ccagggcctcccactaatgtccaggcctcagaggtcagcaggaactacgt
tgtcctcaagctgggatcctcatctcccgcggcaaggatccctttaatgt
acttcatcgagaagtactcaggccaagcttccaagaagcagctttcaagc
agccacttgatttcttgggcttacttaggtccgtgaaaccctctgttcta
tagagtctgat
gaattctcactgcagaacaaggggaagacacttcataaataagaaaagaa
aaaaaacaggccatctcatgaaccatttacataattctctgtgaattctc
attctcaaatcccattttgatgaggctgctcacagaggtctaaaaagggg
cacgtgcttttatttgaatgagacatattacaaacatgcttccttcttat
tatttagaaatatattgtgctccatttgaattgttttttttaggcttatg
cataaggtaccactgtcaccatctcttttccttcaacaagcctctcacct
acacatatagacaaatgtgcaatcggacgcatacacactccacccaagaa
aacagagatgtttctagtccacagagaaataaggaatgtgggaacatcat
ctcaagaattggagaataacattggatgtctctgctgtaaaagtcaccta
cccatatcactgtgggagccctcattgccacaagactcccttgtagcagt
tgcctccagacagattttttttaaatttcagatggaaccttaaagcagtt
aatccttagtcttgtcttagtctcccaccacatcttgctgcctggtagat
cttgtgacctcattagaatagccggataaggaacaagcctgatgattctt
tggatcctgtctctctgcctcctggttagaagaagtacaaggttttggct
ctagtgtaacctgctttcttactctgaaaatggaatgctttgtaggttgt
tcaaagataaagaaatgcgggtgaatggattttgcttccgtccatgaacg
tcatgtgaacaggaagtcccaaggaaacttgggaacatgtgacactggat
agtaatctctgctcatccgtgaggcagagtacaaggcagccagtcagtag
caagtaactatctagacttccttcctgacacaggagattcagaaaagcag
agagtgacacacacatcaggaaaccagaaacctgttcctcagatcccaag
tgtcttgccagtcgctactatgggatgcatgcatgggcctggagtgggac
cagccccagggcatcaatgtccccacacaccacttcatacctaagccttg
ttaacagccggttaggaatcttatac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_15097457_15098571
seq2: B6Ng01-273G05.b_45_1155

seq1  GAATTCAAACACAAATTTTTACCACCTCACATGTACTTAAAAAACTTAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACACAAATTTTTACCACCTCACATGTACTTAAAAAACTTAGC  50

seq1  TAGGTGAGAGGGGATGTAGGTATACCAGATGTCTTTGATCATAAATATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGAGAGGGGATGTAGGTATACCAGATGTCTTTGATCATAAATATCT  100

seq1  CTTGACAGTTATTTGCAAAGGGCTCATCACCATCTCTGTTAAAGTTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAGTTATTTGCAAAGGGCTCATCACCATCTCTGTTAAAGTTTAAA  150

seq1  TAAACAGGCACAGATTGCACCACTTGCAATGTGTATAGATCTTTGGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAGGCACAGATTGCACCACTTGCAATGTGTATAGATCTTTGGAGGA  200

seq1  AGGAAAGAGCAGCAGCCTTAGGAACTAATGTAAGACTTCAGTACTCGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGAGCAGCAGCCTTAGGAACTAATGTAAGACTTCAGTACTCGGTA  250

seq1  TGGAGACACCAGCAAGGTGCGGTCTGTGTCGGTGCCTTGGCAACGTTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGACACCAGCAAGGTGCGGTCTGTGTCGGTGCCTTGGCAACGTTGCC  300

seq1  TGCTGCCTTCACAAAGGCAAGATCCTGGTTTGGAAGATTTCTTCTAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCCTTCACAAAGGCAAGATCCTGGTTTGGAAGATTTCTTCTAGAAA  350

seq1  AATCCTTTCCTCTTTCCTGTAGAAAATCTAGAGGACTTTTGGATGGGACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTTTCCTCTTTCCTGTAGAAAATCTAGAGGACTTTTGGATGGGACT  400

seq1  TTTAGGAACTATTGTTTTGTTAATTTTTTTAAAATCAGAAATAAAAATCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAACTATTGTTTTGTTAATTTTTTTAAAATCAGAAATAAAAATCG  450

seq1  AGTGATCTTTAGTGGAGTGCTTTTGCTTTGAATTTGTCAAAAAAGATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATCTTTAGTGGAGTGCTTTTGCTTTGAATTTGTCAAAAAAGATCCT  500

seq1  GAGATCTGTTTGTCTTCTGAGAGGAAATGACCAACTGTGGCAGGCCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATCTGTTTGTCTTCTGAGAGGAAATGACCAACTGTGGCAGGCCACAC  550

seq1  CAGGGAAGTTTTTGTTTTGTTTTGTTTTGTTTTTTGAAATAAAAAGCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGAAGTTTTTGTTTTGTTTTGTTTTGTTTTTTGAAATAAAAAGCTAT  600

seq1  TTTATTTTATGTGTAAGAATATTTTGCCTGCTATGTGTATATATATATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTATGTGTAAGAATATTTTGCCTGCTATGTGTATATATATATCA  650

seq1  CATGTGTGAGTGTTGCACTCAGAGGCCAGAGGAGGGCACTGGTTCCCCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGTGAGTGTTGCACTCAGAGGCCAGAGGAGGGCACTGGTTCCCCTG  700

seq1  AAACTGGAGTGATAGCCACCATAGAGAAGCTAGGGACCAAACAAACCCAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAGTGATAGCCACCATAGAGAAGCTAGGGACCAAACAAACCCAG  750

seq1  GTCCTCTGGAAAAACAGCCATTGCTCTTAATTTGTGTAGCCATCTCTCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTGGAAAAACAGCCATTGCTCTTAATTTGTGTAGCCATCTCTCCA  800

seq1  GCTCATCAGAACAGACCTGGACTCCGCTGGGGAGTGCTAAGTGTCCCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCATCAGAACAGACCTGGACTCCGCTGGGGAGTGCTAAGTGTCCCCAT  850

seq1  ACAGCACTCATTCCATTC-TTTTTTTTTTTAAACAGGTGATGTTCAGATT  899
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  ACAGCACTCATTCCATTCTTTTTTTTTTTTAAACAGGTGATGTTCAGATT  900

seq1  CCAGGGCCTCCCACTAATGTCCAGGCCTCAGAGGTCAGCAGGAACTACGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCTCCCACTAATGTCCAGGCCTCAGAGGTCAGCAGGAACTACGT  950

seq1  TGTCCTC-AGCTGGGATCCTCCATCTCCCCGCGGCAAGGATCCC-TTAAT  997
      ||||||| |||||||||||| ||||| ||||||||||||||||| |||||
seq2  TGTCCTCAAGCTGGGATCCT-CATCT-CCCGCGGCAAGGATCCCTTTAAT  998

seq1  GTACTTCATCGAGAAGGTACTCAGGCCAAGCTTCCAAGAAGGCAGCTTTC  1047
      ||||||||||||||| |||||||||||||||||||||||| |||||||||
seq2  GTACTTCATCGAGAA-GTACTCAGGCCAAGCTTCCAAGAA-GCAGCTTTC  1046

seq1  AGGCAGCCACCTTGATTTCTGGGCTTTACTTAGGGGTCGTG-AACCCTCT  1096
      | ||||||| |||||||||| ||  ||||||| ||  |||| ||||||||
seq2  AAGCAGCCA-CTTGATTTCTTGGGCTTACTTA-GGTCCGTGAAACCCTCT  1094

seq1  GGTCCCTATAGAGTCTGAT  1115
      | |  ||||||||||||||
seq2  GTT--CTATAGAGTCTGAT  1111

seq1: chr8_15199042_15200170
seq2: B6Ng01-273G05.g_66_1191 (reverse)

seq1  GTAT-AGATTCCCCTAACCCCGCTGTTTACAAAGGCTAAGTATG-AGTGG  48
      |||| |||||  ||||| || |||||| |||| |  || ||||| |||||
seq2  GTATAAGATT--CCTAA-CCGGCTGTTAACAAGGCTTAGGTATGAAGTGG  47

seq1  TTGTGTGGGAACATGGATGCCCTGGGGCTGGTCCCACTCCAGG-CCATGC  97
       |||||||| |||| |||||||||||||||||||||||||||| ||||||
seq2  -TGTGTGGGGACATTGATGCCCTGGGGCTGGTCCCACTCCAGGCCCATGC  96

seq1  ATGCATCCCATAGTAGCCGACTGGC-AGACACTTGGGATCTGGAGAACAG  146
      |||||||||||||||| |||||||| ||||||||||||||||  ||||||
seq2  ATGCATCCCATAGTAG-CGACTGGCAAGACACTTGGGATCTGAGGAACAG  145

seq1  GTTTCTGGTTTCCTTGATGTGTGTGTCACTCTCTGCTTTTCTGAATCTCC  196
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGGTTTCC-TGATGTGTGTGTCACTCTCTGCTTTTCTGAATCTCC  194

seq1  TGTGTCAGGAAGGAAGTCTAAGATAGTTACTTGCTACTGACTGGCTGCCT  246
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TGTGTCAGGAAGGAAGTCT-AGATAGTTACTTGCTACTGACTGGCTGCCT  243

seq1  TGTACTCTGCCTCACGGATGAGCAGAGATTACTATCCAGTGTCACATGTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTCTGCCTCACGGATGAGCAGAGATTACTATCCAGTGTCACATGTT  293

seq1  CCCAAGTTTCCTTGGGACTTCCTGTTCACATGACGTTCATGGACGGAAGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGTTTCCTTGGGACTTCCTGTTCACATGACGTTCATGGACGGAAGC  343

seq1  AAAATCCATTCACCCGCATTTCTTTATCTTTGAACAACCTACAAAGCATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCATTCACCCGCATTTCTTTATCTTTGAACAACCTACAAAGCATT  393

seq1  CCATTTTCAGAGTAAGAAAGCAGGTTACACTAGAGCCAAAACCTTGTACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTTCAGAGTAAGAAAGCAGGTTACACTAGAGCCAAAACCTTGTACT  443

seq1  TCTTCTAACCAGGAGGCAGAGAGACAGGATCCAAAGAATCATCAGGCTTG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTAACCAGGAGGCAGAGAGACAGGATCCAAAGAATCATCAGGCTTG  493

seq1  TTCCTTATCCGGCTATTCTAATGAGGTCACAAGATCTACCAGGCAGCAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTATCCGGCTATTCTAATGAGGTCACAAGATCTACCAGGCAGCAAG  543

seq1  ATGTGGTGGGAGACTAAGACAAGACTAAGGATTAACTGCTTTAAGGTTCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTGGGAGACTAAGACAAGACTAAGGATTAACTGCTTTAAGGTTCC  593

seq1  ATCTGAAATTTAAAAAAAATCTGTCTGGAGGCAACTGCTACAAGGGAGTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAATTTAAAAAAAATCTGTCTGGAGGCAACTGCTACAAGGGAGTC  643

seq1  TTGTGGCAATGAGGGCTCCCACAGTGATATGGGTAGGTGACTTTTACAGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGCAATGAGGGCTCCCACAGTGATATGGGTAGGTGACTTTTACAGC  693

seq1  AGAGACATCCAATGTTATTCTCCAATTCTTGAGATGATGTTCCCACATTC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACATCCAATGTTATTCTCCAATTCTTGAGATGATGTTCCCACATTC  743

seq1  CTTATTTCTCTGTGGACTAGAAACATCTCTGTTTTCTTGGGTGGAGTGTG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCTCTGTGGACTAGAAACATCTCTGTTTTCTTGGGTGGAGTGTG  793

seq1  TATGCGTCCGATTGCACATTTGTCTATATGTGTAGGTGAGAGGCTTGTTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCGTCCGATTGCACATTTGTCTATATGTGTAGGTGAGAGGCTTGTTG  843

seq1  AAGGAAAAGAGATGGTGACAGTGGTACCTTATGCATAAGCCTAAAAAAAA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAAGAGATGGTGACAGTGGTACCTTATGCATAAGCCTAAAAAAAA  893

seq1  CAATTCAAATGGAGCACAATATATTTCTAAATAATAAGAAGGAAGCATGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCAAATGGAGCACAATATATTTCTAAATAATAAGAAGGAAGCATGT  943

seq1  TTGTAATATGTCTCATTCAAATAAAAGCACGTGCCCCTTTTTAGACCTCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATATGTCTCATTCAAATAAAAGCACGTGCCCCTTTTTAGACCTCT  993

seq1  GTGAGCAGCCTCATCAAAATGGGATTTGAGAATGAGAATTCACAGAGAAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGCCTCATCAAAATGGGATTTGAGAATGAGAATTCACAGAGAAT  1043

seq1  TATGTAAATGGTTCATGAGATGGCCTGTTTTTTTTCTTTTCTTATTTATG  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAATGGTTCATGAGATGGCCTGTTTTTTTTCTTTTCTTATTTATG  1093

seq1  AAGTGTCTTCCCCTTGTTCTGCAGTGAGAATTC  1129
      |||||||||||||||||||||||||||||||||
seq2  AAGTGTCTTCCCCTTGTTCTGCAGTGAGAATTC  1126