BAC Information

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BAC

Clone NameB6Ng01-273H21
Chromosome8 (Build37)
Map Location 30,861,860 - 30,862,904
singlet/doubletsinglet
Overlap genenone
Upstream geneUnc5d, LOC100041237
Downstream geneEG628189
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273H21.bB6Ng01-273H21.g
ACCGA075051GA075052
length1,2501,054
definitionB6Ng01-273H21.b B6Ng01-273H21.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttacagcttcaaggacaattcagtaaggtctattatattttac
atgaatgattcaagaaaatagggtagcgttagacattactttaatcacat
ggaaaggtttccccctgtaataagggtgattattctgattttggagataa
ctagttgcactatagagcattgtccaaggaagaaatctctggagtttagt
atgtgtcattcactaaaatgaattgtttcatagctacagagagagtgaaa
attcaaaagggacactgaaatatcacacaattagcaactacaggaggtcg
atataatccttcctactagaaaaaaaaaggcaaatggttagaatttaaag
catataacagcggcagaggattcctggtgctaatgttaaggcctctgaca
gattggcactgatttgcctatggcatcatactgcagtcaatactacaatt
attagcttaatgcctcaaagttggaatttgttacttctgttgaacttaat
gggtgcaagggatgccttgggaatgacactcagttaaactatgagacaaa
gaaagaaagaaagaaagaaagagagagagagagagagagagagagagaga
gagagctgagagaaagacctaaaggaaacaccttaagagccaaaacacaa
ccatgggcatacaccgagtctggcctcttttcaaccagactttctgtttg
ggaatgacatgaattttccaaaggcattctttttacaatgtgtcaactgc
cttttgaaaactatttgtaagaaacttaatttaaaatatgcatattttaa
aggaaagttgttttaaatgttaaggcaaaacttaaaagcaagcacatggc
atgtaaaaaaaagaaatcaacaaatagccattcagtcctcaaattcttca
aaaaattggcaacacagcatatcaactgcagtgtctttcaacagaccagc
atcttgtgcctccacctgccatgttcaggagacagctctcttgagaaatc
tgtcttttttacaacctttacagcccaaagggtggagaagcaccaaggga
actccagaagcccctgcgtgcccatttcctccctccctcctgcaccaaga
gttgaacagaccagcctccttcctagcccctggttacagaaaagtaagat
gaacagttaagccgaaactttcccgaagaccgctcataccagcccttaac
tcagaagagagaatcatgaagagggcgctctccaaaagtgatgaccgtac

gaattcctctctagtggaatattccattcatacatgagaatgccttgaaa
actgggcaggcaggaaggatagttgcagagattataatagtctcctttat
atcccagcgagttaagaagagaaatggcaggtagtgttaagtgatctgca
tttgtaccatacatttacagagggtggcatcttctgtattgtttgacctt
cactaggaaatgtcattggatgctgagagatggcatggggattatggatt
attggtatagacaacaacaacaaaacaacaacacaacaataagcacaaga
acaagccacgagtaaaagtcaactaagcaagtctctgggatgactgaagt
ttgggtggagattttgtttatagtgctctgtgttgctcctcttggtgcat
gtgtttcttccttgccacatcactgcatcaaacaagaccttccctgcatc
acaaccaccaatctacagtttaatgggctagaaaaatggaggctaagcag
aatacatcctccttccccattgtaacttcccgaagctgaatcagtgatat
ggtcacctctacttaatacttattacaaatggtcatatggaaagacaaaa
ttcacattttttttttgtttcaaagtaacaagaatagatagatcatggta
gaggtcttaggggaactgtgggaaaacatgttggacaacaattggtgctt
gtggttagaggaacaaagcaaaatgggtggaaacagggtgtttacattgg
acttcaggagacagaaaaattataaagtaaccaaggtgtgggtgatgatg
tctttggccacgtggcaagaagtaaggtgaatttgataaatggatgcttc
tgctgtttctcaggaaagttgggcagggaatagggagggaacaggcctca
atactgaagcttttgatgaaatcaagtgtttatcagaaacatgaaaatga
ttaacagcccagaacagaagatgctgaactgagtgaattgtcaagagctc
ttcattggatgaaaattttttttaatgttaatgggtggggtttaatgaaa
gtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_30861860_30862904
seq2: B6Ng01-273H21.g_65_1118

seq1  GAATTCCTCTCTAGTGGAATATTCCATTCATACATGAGAATGCCTTGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCTAGTGGAATATTCCATTCATACATGAGAATGCCTTGAAA  50

seq1  ACTGGGCAGGCAGGAAGGATAGTTGCAGAGATTATAATAGTCTCCTTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCAGGCAGGAAGGATAGTTGCAGAGATTATAATAGTCTCCTTTAT  100

seq1  ATCCCAGCGAGTTAAGAAGAGAAATGGCAGGTAGTGTTAAGTGATCTGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCGAGTTAAGAAGAGAAATGGCAGGTAGTGTTAAGTGATCTGCA  150

seq1  TTTGTACCATACATTTACAGAGGGTGGCATCTTCTGTATTGTTTGACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTACCATACATTTACAGAGGGTGGCATCTTCTGTATTGTTTGACCTT  200

seq1  CACTAGGAAATGTCATTGGATGCTGAGAGATGGCATGGGGATTATGGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGAAATGTCATTGGATGCTGAGAGATGGCATGGGGATTATGGATT  250

seq1  ATTGGTATAGACAACAACAACAAAACAACAACACAACAATAAGCACAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTATAGACAACAACAACAAAACAACAACACAACAATAAGCACAAGA  300

seq1  ACAAGCCACGAGTAAAAGTCAACTAAGCAAGTCTCTGGGATGACTGAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCACGAGTAAAAGTCAACTAAGCAAGTCTCTGGGATGACTGAAGT  350

seq1  TTGGGTGGAGATTTTGTTTATAGTGCTCTGTGTTGCTCCTCTTGGTGCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGTGGAGATTTTGTTTATAGTGCTCTGTGTTGCTCCTCTTGGTGCAT  400

seq1  GTGTTTCTTCCTTGCCACATCACTGCATCAAACAAGACCTTCCCTGCATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCTTCCTTGCCACATCACTGCATCAAACAAGACCTTCCCTGCATC  450

seq1  ACAACCACCAATCTACAGTTTAATGGGCTAGAAAAATGGAGGCTAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCACCAATCTACAGTTTAATGGGCTAGAAAAATGGAGGCTAAGCAG  500

seq1  AATACATCCTCCTTCCCCATTGTAACTTCCCGAAGCTGAATCAGTGATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACATCCTCCTTCCCCATTGTAACTTCCCGAAGCTGAATCAGTGATAT  550

seq1  GGTCACCTCTACTTAATACTTATTACAAATGGTCATATGGAAAGACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACCTCTACTTAATACTTATTACAAATGGTCATATGGAAAGACAAAA  600

seq1  TTCACATTTTTTTTTTGTTTCAAAGTAACAAGAATAGATAGATCATGGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACATTTTTTTTTTGTTTCAAAGTAACAAGAATAGATAGATCATGGTA  650

seq1  GAGGTCTTAGGGGAACTGTGGGAAAACATGTTGGACAACAATTGGTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCTTAGGGGAACTGTGGGAAAACATGTTGGACAACAATTGGTGCTT  700

seq1  GTGGTTAGAGGAACAAAGCAAAATGGGTGGAAACAGGGTGTTTACATTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAGAGGAACAAAGCAAAATGGGTGGAAACAGGGTGTTTACATTGG  750

seq1  ACTTCAGGAGACAGAAAAATTATAAAGTAACCAAGGTGTGGGTGATGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGAGACAGAAAAATTATAAAGTAACCAAGGTGTGGGTGATGATG  800

seq1  TCTTTGGCCACGTGGCAAGAAGTAAGGTGAATTTGATAAATGGATGCTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGGCCACGTGGCAAGAAGTAAGGTGAATTTGATAAATGGATGCTTC  850

seq1  TGCTGTTTCTCAGGAAAGTTGGGCAGGGAATAGGGAGGGAACAGGCCTCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTCTCAGGAAAGTTGGGCAGGGAATAGGGAGGGAACAGGCCTCA  900

seq1  ATACTGAAGCTTTTGATG-AATCAGGTG-TTATCAGAAACATGAAAATGA  948
      |||||||||||||||||| ||||| ||| |||||||||||||||||||||
seq2  ATACTGAAGCTTTTGATGAAATCAAGTGTTTATCAGAAACATGAAAATGA  950

seq1  -TAACAGCCAAGAACAGAAGAGGCTGAACGGAGTGAA-TGTCAAGAGCCT  996
       |||||||| ||||||||||| ||||||| ||||||| ||||||||||  
seq2  TTAACAGCCCAGAACAGAAGATGCTGAACTGAGTGAATTGTCAAGAGCTC  1000

seq1  CTCA-TGGATGAAAA-TTTTTTTAATGTT-ATTGGTGGG--TTAATGAAA  1041
       ||| |||||||||| ||||||||||||| || ||||||  |||||||||
seq2  TTCATTGGATGAAAATTTTTTTTAATGTTAATGGGTGGGGTTTAATGAAA  1050

seq1  GTGG  1045
      ||||
seq2  GTGG  1054