BAC Information

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BAC

Clone NameB6Ng01-273J15
Chromosome8 (Build37)
Map Location 58,590,103 - 58,769,297
singlet/doubletdoublet
Overlap geneGlra3
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, LOC664812
Downstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273J15.bB6Ng01-273J15.g
ACCGA075134GA075135
length1,0191,133
definitionB6Ng01-273J15.b B6Ng01-273J15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,768,606 - 58,769,297)(58,590,103 - 58,591,241)
sequence
gaattcctgtgctggaaacgtaattcttaaagttatatgctaatggtatc
tggaggtagcatctttaggaggtaatttagatctaagaggtcatgaggat
gggccctcaccactacattaatggctctgttagtagaggaaaagagatca
catttgctctttactgctgagtgcttcattatcatcgtcaaattctgcct
gttttaaatacaaccttgcaaccttagccttcctaaagatgaggggaata
aatgcacccagattcttctattttgttacagcaaatttgacagaaattgg
acaaaattttaagctacttttcttccttttcttttcttttcttttctttt
cttttctattggttgttttatttacttatatttcaaatgttatcctcctt
cctggttttccctttgcaaactccccaccccactccctccccctctgctt
ctgtgagggaattcgcctactcgcccacccactcctgcctcaccacctta
gcattcccatacactggggcatcgagcttccacaggaccaagggcctccc
ttcccattgatgccagattaggcaatcctctgctaagtatgcagctggag
ccatgggtccctccatgttgctgatatcaaagggtgcttgctgacaggag
cctagtatggctgtcccctgagaggttctgccaagactgaccaatacaga
ggcagatacttacagccaatcaaccatctgactgagcatgagcacaggga
ccccagtggaggagttaggggaaggactgaagagctgaaggaccagactc
ccctccccccacccagaactccccagggaccaccaaccaaagctgtctac
ttttcagtgtctggtaagttcctgtgcttttgtaagatacattacttggt
ccatttatcaactctataaagtaaactttacttttattttcatttataga
tgaagaagttgagatcagggaaaacaagtgacctaacccaaaatcattat
cactttggcataaatctgg

gaattcctctcagcagtaagtccatggtttactttttccaatgcaaatgt
gccaactgacaacttaaaatcatttgttcaacacaacactgtcagagtca
tataaaagtattgccatagtcctatatactgagatatttaaacaaaatgt
aaatcttaaggacaatggtctgggttatacgttgtgacatttaacgattt
ttaaagttatttgtaagttatctaatacttatatttatgaagtatttgaa
agcaacagactttgacctatcagctaaagtccagttagtattaattgaat
tctaaggcaactgacttccaaaacttatcacagacccaataaacatctgc
aagtggctccaggaaaggagcattagcactgagataatattatattggac
ataaagcaatattccattttccatttgttaaattggcatgaaaagcctaa
ttattcatatgttgaaacatactgtgataaggagatactctcatattgcc
cttcaccttcccctggactttggtcacttaagtttgagtcctcctcttcc
tctttttctccctggtcctccaccgcttttcccttctgcatcccattcct
cctcttcttcctgtctgtctcctcccctcctcttcctttaccacctcttt
cccctctccccctcttcctcttttttctcccaagttcctctctccttccc
tgcctttctcctcaccacatctgaagcgatggacttctgttgccttttct
ctgctggttcttagactgtcctgaaacactgttagagaaccaagccttaa
cagggctgatacacttgtcttttcttcctgttagtgactgagccaatttt
cctgagcattgttttgttaaaactgggcaatactgttgtcattatgacta
ttcattttacacttttctgttccctttcttacttatctatatagcatgct
tcaactgcacactacctagactaggagtaagactatcctgcatttgctgt
ctaatagaaaacggctgctagctcatacacaccttaacactaaacttcac
tactaataaaaatagcccacagatttaggtataatttgactccctcattc
atatttgttttttgtccggataactcttactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58768606_58769297
seq2: B6Ng01-273J15.b_41_732 (reverse)

seq1  GGTCAGTCTTGGCAGAACCTCTCAGGGGACAGCCATACTAGGCTCCTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTCTTGGCAGAACCTCTCAGGGGACAGCCATACTAGGCTCCTGTC  50

seq1  AGCAAGCACCCTTTGATATCAGCAACATGGAGGGACCCATGGCTCCAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCACCCTTTGATATCAGCAACATGGAGGGACCCATGGCTCCAGCT  100

seq1  GCATACTTAGCAGAGGATTGCCTAATCTGGCATCAATGGGAAGGGAGGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACTTAGCAGAGGATTGCCTAATCTGGCATCAATGGGAAGGGAGGCC  150

seq1  CTTGGTCCTGTGGAAGCTCGATGCCCCAGTGTATGGGAATGCTAAGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTCCTGTGGAAGCTCGATGCCCCAGTGTATGGGAATGCTAAGGTGG  200

seq1  TGAGGCAGGAGTGGGTGGGCGAGTAGGCGAATTCCCTCACAGAAGCAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGAGTGGGTGGGCGAGTAGGCGAATTCCCTCACAGAAGCAGAG  250

seq1  GGGGAGGGAGTGGGGTGGGGAGTTTGCAAAGGGAAAACCAGGAAGGAGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGGAGTGGGGTGGGGAGTTTGCAAAGGGAAAACCAGGAAGGAGGA  300

seq1  TAACATTTGAAATATAAGTAAATAAAACAACCAATAGAAAAGAAAAGAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTGAAATATAAGTAAATAAAACAACCAATAGAAAAGAAAAGAAA  350

seq1  AGAAAAGAAAAGAAAAGGAAGAAAAGTAGCTTAAAATTTTGTCCAATTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGAAAAGAAAAGGAAGAAAAGTAGCTTAAAATTTTGTCCAATTTC  400

seq1  TGTCAAATTTGCTGTAACAAAATAGAAGAATCTGGGTGCATTTATTCCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAAATTTGCTGTAACAAAATAGAAGAATCTGGGTGCATTTATTCCCC  450

seq1  TCATCTTTAGGAAGGCTAAGGTTGCAAGGTTGTATTTAAAACAGGCAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTTAGGAAGGCTAAGGTTGCAAGGTTGTATTTAAAACAGGCAGAA  500

seq1  TTTGACGATGATAATGAAGCACTCAGCAGTAAAGAGCAAATGTGATCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACGATGATAATGAAGCACTCAGCAGTAAAGAGCAAATGTGATCTCT  550

seq1  TTTCCTCTACTAACAGAGCCATTAATGTAGTGGTGAGGGCCCATCCTCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTCTACTAACAGAGCCATTAATGTAGTGGTGAGGGCCCATCCTCAT  600

seq1  GACCTCTTAGATCTAAATTACCTCCTAAAGATGCTACCTCCAGATACCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCTTAGATCTAAATTACCTCCTAAAGATGCTACCTCCAGATACCAT  650

seq1  TAGCATATAACTTTAAGAATTACGTTTCCAGCACAGGAATTC  692
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATAACTTTAAGAATTACGTTTCCAGCACAGGAATTC  692


seq1: chr8_58590103_58591241
seq2: B6Ng01-273J15.g_64_1196

seq1  GAATTCCTCTCAGCAGTAAGTCCATGGTTTACTTTTTCCAATGCAAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAGCAGTAAGTCCATGGTTTACTTTTTCCAATGCAAATGT  50

seq1  GCCAACTGACAACTTAAAATCATTTGTTCAACACAACACTGTCAGAGTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAACTGACAACTTAAAATCATTTGTTCAACACAACACTGTCAGAGTCA  100

seq1  TATAAAAGTATTGCCATAGTCCTATATACTGAGATATTTAAACAAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAGTATTGCCATAGTCCTATATACTGAGATATTTAAACAAAATGT  150

seq1  AAATCTTAAGGACAATGGTCTGGGTTATACGTTGTGACATTTAACGATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTAAGGACAATGGTCTGGGTTATACGTTGTGACATTTAACGATTT  200

seq1  TTAAAGTTATTTGTAAGTTATCTAATACTTATATTTATGAAGTATTTGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTTATTTGTAAGTTATCTAATACTTATATTTATGAAGTATTTGAA  250

seq1  AGCAACAGACTTTGACCTATCAGCTAAAGTCCAGTTAGTATTAATTGAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACAGACTTTGACCTATCAGCTAAAGTCCAGTTAGTATTAATTGAAT  300

seq1  TCTAAGGCAACTGACTTCCAAAACTTATCACAGACCCAATAAACATCTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGCAACTGACTTCCAAAACTTATCACAGACCCAATAAACATCTGC  350

seq1  AAGTGGCTCCAGGAAAGGAGCATTAGCACTGAGATAATATTATATTGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGCTCCAGGAAAGGAGCATTAGCACTGAGATAATATTATATTGGAC  400

seq1  ATAAAGCAATATTCCATTTTCCATTTGTTAAATTGGCATGAAAAGCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGCAATATTCCATTTTCCATTTGTTAAATTGGCATGAAAAGCCTAA  450

seq1  TTATTCATATGTTGAAACATACTGTGATAAGGAGATACTCTCATATTGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATATGTTGAAACATACTGTGATAAGGAGATACTCTCATATTGCC  500

seq1  CTTCACCTTCCCCTGGACTTTGGTCACTTAAGTTTGAGTCCTCCTCTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACCTTCCCCTGGACTTTGGTCACTTAAGTTTGAGTCCTCCTCTTCC  550

seq1  TCTTTTTCTCCCTGGTCCTCCACCGCTTTTCCCTTCTGCATCCCATTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTCTCCCTGGTCCTCCACCGCTTTTCCCTTCTGCATCCCATTCCT  600

seq1  CCTCTTCTTCCTGTCTGTCTCCTCCCCTCCTCTTCCTTTACCACCTCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCTTCCTGTCTGTCTCCTCCCCTCCTCTTCCTTTACCACCTCTTT  650

seq1  CCCCTCTCCCCCTCTTCCTCTTTTTTCTCCCAAGTTCCTCTCTCCTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCCCCTCTTCCTCTTTTTTCTCCCAAGTTCCTCTCTCCTTCCC  700

seq1  TGCCTTTCTCCTCACCACATCTGAAGCGATGGACTTCTGTTGCCTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCTCCTCACCACATCTGAAGCGATGGACTTCTGTTGCCTTTTCT  750

seq1  CTGCTGGTTCTTAGACTGTCCTGAAACACTGTTAGAGAACCAAGCCTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGGTTCTTAGACTGTCCTGAAACACTGTTAGAGAACCAAGCCTTAA  800

seq1  CAGGGCTGATACACTTGTCTTTTCTTCCTGTTAGTGACTGAGCCAATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGCTGATACACTTGTCTTTTCTTCCTGTTAGTGACTGAGCCAATTTT  850

seq1  CCTGAGCATTGTTTTGTTAAAACTGGGCAATACTGTTGTCATTATGACTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCATTGTTTTGTTAAAACTGGGCAATACTGTTGTCATTATGACTA  900

seq1  TTTCATTTTACACTTTTCTGTTCCCTTTCTTACTTATCTATTATAGCATG  950
       ||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  -TTCATTTTACACTTTTCTGTTCCCTTTCTTACTTATCTA-TATAGCATG  948

seq1  CTTCAACTGCACACTACCTAGACTAGAAGTAAGAACTATCCTGCATTTGC  1000
      |||||||||||||||||||||||||| |||||| ||||||||||||||||
seq2  CTTCAACTGCACACTACCTAGACTAGGAGTAAG-ACTATCCTGCATTTGC  997

seq1  TGTCTAATAGAAAAAGGCTGCTAGCTCATACACA-CTTAACACTAAACTT  1049
      |||||||||||||| ||||||||||||||||||| |||||||||||||||
seq2  TGTCTAATAGAAAACGGCTGCTAGCTCATACACACCTTAACACTAAACTT  1047

seq1  CACTAACTAAT-AAAATAGCCCACAGATTTAGTATTAAATTTTGACT-CC  1097
      |||| |||||| ||||||||||||||||||||   || | ||||||| ||
seq2  CACT-ACTAATAAAAATAGCCCACAGATTTAG--GTATAATTTGACTCCC  1094

seq1  TCATTTCAATATTGTTTTTTGTCTGGGATAACTCTTTACTCA  1139
      ||| ||||   ||||||||||||  ||||||||| |||||||
seq2  TCA-TTCATATTTGTTTTTTGTC-CGGATAACTC-TTACTCA  1133


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