BAC Information

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BAC

Clone NameB6Ng01-275M18
Chromosome8 (Build37)
Map Location 69,748,015 - 69,749,136
singlet/doubletsinglet
Overlap genenone
Upstream geneMarch1, 1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
Downstream geneNat1, Nat2, LOC100041265, Nat3, Psd3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275M18.bB6Ng01-275M18.g
ACCGA076739GA076740
length1,1281,189
definitionB6Ng01-275M18.b B6Ng01-275M18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacatatgtggcaccaaccatttgtgatttctacccaatattgg
gcattatgctttaattttagtatagtttcccctaccctcaagataagatg
tactttaagatcttctagttttaagatcatgaataagatagaagctgcat
taaattacagaattacctcagaacctgtacttagatcactttatgttcct
gttttctttttgtagcattattttgtggctccttgaggaatggcatagtt
atttatctagttgtctctttcatattgatcagctgctagagagctagaat
tcactttctgctttatgtgttacataatacttatttactcttttcatttt
tgcttagctctctgcaagcatcacagtattgataacaagctgattaatta
acaaaacattaattgtgttttgacactacagttttatttgtttctcaaat
ataaaacaaaatgatatttatattttaaacaatacagattttactttttg
gtttcattcaatctttagacaacatattccctattttttaaaaacttaac
ataattaagaagtttcagataaacttcctgataaatgagttggctcaagt
tgtattgaactgcatctctcttaacacacacacacacacacacacacaca
cacacacacacacacacaagcaggcccttccggaattcccgaattgcctt
tgtctagaaatccataactggcatgtggtaaagacagtgaacttttcttt
tttaataagaaatattatctagtgtaacaaaagaaatatagtataataaa
atacaccatttagtaatgtcatcattatcaagtgttctgtgttgtacata
actatatcaatacactttttccacctgtatgagagcaaagcattgtactg
tgtggcattaaaatggccatgatgtcaccaggaaaagaagaacactctct
ccaatagcattatatgggagccactgtgatacgtgccattggacagcaga
tttgtatacacacatatacatgttccattgaacttgcatcttttccattc
tcttttcttgcctaaaataactgttttctttaagtaaaaaaacaagttag
gaaataatttagttcctctaatatggta
gaattctatgaaacagaaaacttcggtatggcaaaacacaaaatcattag
gacaaaacagcagcctatataactagaaaaatatttttaccatttacaca
ttggatagaaagctaatatccaaaatacagaggaacttaatgtctagata
tcaagaaaagaaatttttaaatggtatatagatctaaacagagaattcac
caaataagaaactcaaatgactgagaaatatttaaagaaatgttcaacat
tagtcatcaaggagatgcaaaataaaagtactttgagtacaccattcaga
atagctaagatcaataaaatcaatgaacattcatggtagtaaggatttgg
agcaatgtgaacactcatttgttgttagtgggaatgcaaacttttatagc
tactatggaaatcagtgtgcatactgtggttcccctggaaaatgggaatg
tatctacctcaagatccacctaaaccactcttaggcatatacccataggg
tggatcatcctaccacagagacacttgctcacccatgtttattgctgctt
tattcataataggcagatattggaatcaaactagatgtccctcactagaa
gaattgatatagaaaatgatgtgatatatttacacaatgggatgtactca
gccattacaaaacccaaacaaacaatgcaaatcgtgaaattcacaagtca
ctggatagaagtagagaaaaatcaatctgagggaaatcagacccccaaaa
gataactataatatgtgaatattacttgttaagtcactgctaaccaagct
acaatctgtagaacacagaggttctgtagagtgtaaggagtaggggaaac
aaacagatctcccaaggaaaaggcaatagaatatatagttatgaatggat
gggcagggtgaggatcaaagggagattcaaacgggggcatggagaagaac
ggtcagataaaggaaggaatatttggcgagatagctaaattaaaggcatt
tgagtggtagtatgggacctatatagtagagctttgtacgattttatgaa
agatctaatgaaatagtcaattatgagggacagaagagcacagggttaga
actctctgtccaaatgaagccttcagactgattagctaatagtatgggtc
aatggccaaagtgtctccactgtgggcttctcaccgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_69748015_69749136
seq2: B6Ng01-275M18.b_45_1172 (reverse)

seq1  TACCATATTTAGA-GAACTAAATTATTTCCTAACTTTGTTTTTTACTTAA  49
      ||||||| ||||| ||||||||||||||||||||||  ||||||||||||
seq2  TACCATA-TTAGAGGAACTAAATTATTTCCTAACTTGTTTTTTTACTTAA  49

seq1  --GAAACAGTTATTTTAGGCAAG-AAAGAG-ATGGAAAAGATGCAAGTTC  95
         |||||||||||||||||||| |||||| |||||||||||||||||||
seq2  AGAAAACAGTTATTTTAGGCAAGAAAAGAGAATGGAAAAGATGCAAGTTC  99

seq1  AATGGAACATTGTTATATGTGTGTATAC-AATCTGCTGTCCAATGGCACG  144
      ||||||||||   ||||||||||||||| |||||||||||||||||||||
seq2  AATGGAACAT--GTATATGTGTGTATACAAATCTGCTGTCCAATGGCACG  147

seq1  TATCACAGTGGCT-CCATATAATGCTATTGGAGAGAGTGTTCTTC-TTTC  192
      ||||||||||||| ||||||||||||||||||||||||||||||| ||||
seq2  TATCACAGTGGCTCCCATATAATGCTATTGGAGAGAGTGTTCTTCTTTTC  197

seq1  CTGGTGACATCATGGCCATTTTAATGCCACACAGTACAATGCTTTGCTCT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGACATCATGGCCATTTTAATGCCACACAGTACAATGCTTTGCTCT  247

seq1  CATACAGGTGG-AAAAGTGTATTGATATAGTTATGTACAACACAGAACAC  291
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CATACAGGTGGAAAAAGTGTATTGATATAGTTATGTACAACACAGAACAC  297

seq1  TTGATAATGATGACATTACTAAATGGTGTATTTTATTATACTATATTTCT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAATGATGACATTACTAAATGGTGTATTTTATTATACTATATTTCT  347

seq1  TTTGTTACACTAGATAATATTTCTTATTAAAAAAGAAAAGTTCACTGTCT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTACACTAGATAATATTTCTTATTAAAAAAGAAAAGTTCACTGTCT  397

seq1  TTACCACATGCCAGTTATGGATTTCTAGACAAAGGCAATTCGGGAATTCC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCACATGCCAGTTATGGATTTCTAGACAAAGGCAATTCGGGAATTCC  447

seq1  GGAAGGGCCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCCTGCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  497

seq1  GTGTGTGTTAAGAGAGATGCAGTTCAATACAACTTGAGCCAACTCATTTA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTAAGAGAGATGCAGTTCAATACAACTTGAGCCAACTCATTTA  547

seq1  TCAGGAAGTTTATCTGAAACTTCTTAATTATGTTAAGTTTTTAAAAAATA  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGTTTATCTGAAACTTCTTAATTATGTTAAGTTTTTAAAAAATA  597

seq1  GGGAATATGTTGTCTAAAGATTGAATGAAACCAAAAAGTAAAATCTGTAT  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAATATGTTGTCTAAAGATTGAATGAAACCAAAAAGTAAAATCTGTAT  647

seq1  TGTTTAAAATATAAATATCATTTTGTTTTATATTTGAGAAACAAATAAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAAATATAAATATCATTTTGTTTTATATTTGAGAAACAAATAAAA  697

seq1  CTGTAGTGTCAAAACACAATTAATGTTTTGTTAATTAATCAGCTTGTTAT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTGTCAAAACACAATTAATGTTTTGTTAATTAATCAGCTTGTTAT  747

seq1  CAATACTGTGATGCTTGCAGAGAGCTAAGCAAAAATGAAAAGAGTAAATA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACTGTGATGCTTGCAGAGAGCTAAGCAAAAATGAAAAGAGTAAATA  797

seq1  AGTATTATGTAACACATAAAGCAGAAAGTGAATTCTAGCTCTCTAGCAGC  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTATGTAACACATAAAGCAGAAAGTGAATTCTAGCTCTCTAGCAGC  847

seq1  TGATCAATATGAAAGAGACAACTAGATAAATAACTATGCCATTCCTCAAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCAATATGAAAGAGACAACTAGATAAATAACTATGCCATTCCTCAAG  897

seq1  GAGCCACAAAATAATGCTACAAAAAGAAAACAGGAACATAAAGTGATCTA  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCACAAAATAATGCTACAAAAAGAAAACAGGAACATAAAGTGATCTA  947

seq1  AGTACAGGTTCTGAGGTAATTCTGTAATTTAATGCAGCTTCTATCTTATT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGGTTCTGAGGTAATTCTGTAATTTAATGCAGCTTCTATCTTATT  997

seq1  CATGATCTTAAAACTAGAAGATCTTAAAGTACATCTTATCTTGAGGGTAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCTTAAAACTAGAAGATCTTAAAGTACATCTTATCTTGAGGGTAG  1047

seq1  GGGAAACTATACTAAAATTAAAGCATAATGCCCAATATTGGGTAGAAATC  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAACTATACTAAAATTAAAGCATAATGCCCAATATTGGGTAGAAATC  1097

seq1  ACAAATGGTTGGTGCCACATATGTAGAATTC  1122
      |||||||||||||||||||||||||||||||
seq2  ACAAATGGTTGGTGCCACATATGTAGAATTC  1128