BAC Information

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BAC

Clone NameB6Ng01-275P18
Chromosome8 (Build37)
Map Location 79,798,276 - 79,799,369
singlet/doubletsinglet
Overlap geneArhgap10
Upstream geneEG631594, LOC666226, LOC100039211, LOC384847, Nr3c2
Downstream geneLOC100039235, AI931714, Tmem34, Ednra, EG622803, Ttc29
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275P18.bB6Ng01-275P18.g
ACCGA076875GA076876
length1,1961,088
definitionB6Ng01-275P18.b B6Ng01-275P18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatgcagggaaatgcaaatcaaaacaaccctgagattccacctca
caccagtcagaatggctaagatcaaaaattcaggtgacagcagatgctgg
cgaggatgtggagaaagaggaacactcctccactgttggtgggattgcaa
gcttgtacaaccactctgaaaatcagtctggcggttcctcagaaaattgg
acatagtactaccagaggatcccgcaatacctctcctgggcatatatcca
gaagaggtcccaactggtaagaaggacacatgctccactatgttcatagc
agccttatttataatagccagaagctggaaagaacccagatgcccctcaa
cagaggaatggatacagaaaatgtggtacatttacacaatggagtactac
tcagctattaaaaaatgaatttatgaaattcctaggcaaatggatggaac
tggagggcatcatcctgagtgaggtaacccaatcacaaaggaactcacac
aatatgtactcactgataagtggatattagcccagaaacttaggataccc
aagatataagatacaatttgctaaacacatgaaactcaagaagaacgaag
accaaagtgtggacactttgctccttcttagaattgggaacaagacaccc
atggaaggagttacagagacaaagtttggagctgtgacgaaaggatggac
catctagagactgccatatccggggatccatcccataatcagcttccaaa
cgctgacaccattgcacacactagcaagattttgctgaaaggacctagat
agagctctctcttctgagactatgccagggcctagcaaacacagaagtgg
atgctcacagtcagctattggatggatcacagggtccccaatggaggatc
tagagaaagtacccaaggagctaaagggatctgcaaccctataggtggaa
cacgtatgaactaaccagtgcccctgagctctgactctagctgcatatgt
atcaaagatgactagtcggcatactggaaagagagcccatgaactgcaac
tttatatgtcccagttacaggatggcaggtcgaatggatggtggggttaa
gggattggggctaccgatcagcgcactacagatcgacgtgcatact
gaattcagtccccagaacccgcataaaaaagctaggcgctgcctgcatag
acgggaagaagggaacgcagggcttgctggccaggcagctaggcgtaatc
gtccagtgagagactcagcagacaaggaggaacaatacctaacttggttt
tcacaagtgtacatgtaggcatacctgcatgtattctctctctctctttc
tctctctctctctctctctctctctctctctctcacacacacacacacac
acacacacacaggcacggacacacactttactggcttttatcagctcaga
ttatctttgctacagataaatgcttctttctctctctcttttttaattag
ttatttatttcatttacatttccaatgctatcccaaaagtcccccacacc
ctcccccacccactcttccacccacccactcccacttcttggccctggcg
ttcccctgtactgaggcatataaagtttgcacaaccaatgggcctctctt
tccactgatggctgactaggccatcttctgatacatatgcagctagagac
acgagctctgggaggtactggttagttcatattgttgttccacctatagg
gttgcagatccccccagctccttgggtactttctctagctcagagagcat
acttcagaaccaccttctactcccaaactggggtgtggctcaatggtagc
atgtgctaagcaggctctgtttattttaagaaacattttttaatgcccac
tctcctgggccccatcccatggctatgatccagtgggccctagaagaagg
tggaaagcttgtgttgctaacagactctaaggtgatgcttcatgagcagt
tacctgggtctctggggcctcttttcttgattccaacctggactgattgc
atttttctttcttaaatcccaactgtgctatcaccaaagtggttgccagg
tatgtagaatatgctcttctagctgggctgccttgtctggctcgtgggaa
gaggagcacctagcctgcaagactgagtgctagggtgggggggatgcctg
gatgccttaccatgactgcaggataagagatggggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_79798276_79799369
seq2: B6Ng01-275P18.g_64_1151 (reverse)

seq1  TTTCCCCTCCTCTTCTCCTCCAGTCA-GGTAAGGGCCTCCCAGGCATCCC  49
      |||||||  ||||| |||| |||||| |||||||  |  |||||||||||
seq2  TTTCCCCATCTCTTATCCTGCAGTCATGGTAAGG--CATCCAGGCATCCC  48

seq1  CCCCACCCTAGCACCTCAAGTCTCTGCAAGGCTAGGTGCCTCCTC-TCCC  98
      ||||||||||||| ||| ||||| ||| |||||||||| |||||| ||||
seq2  CCCCACCCTAGCA-CTC-AGTCT-TGC-AGGCTAGGTG-CTCCTCTTCCC  93

seq1  ACGGAGGCCAGACAAGGCAGCCCAGCTAGAAGAGCATATTCTACATA-CT  147
      |||   ||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACG--AGCCAGACAAGGCAGCCCAGCTAGAAGAGCATATTCTACATACCT  141

seq1  GGCAACCACTTTGGTGATAGCACAGTTGGGATTTAAGAAAAGAAAAATGC  197
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GGCAACCACTTTGGTGATAGCACAGTTGGGATTTAAG-AAAGAAAAATGC  190

seq1  AATCAGTCCAGGTTGGAATCAAGAAAAGAGG-CCCAGAGACCCAGGTAAC  246
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AATCAGTCCAGGTTGGAATCAAGAAAAGAGGCCCCAGAGACCCAGGTAAC  240

seq1  TGCTCATGAAGCATCACCTTAGAGTCTGTTAGCAACACAAGCTTTCCACC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGAAGCATCACCTTAGAGTCTGTTAGCAACACAAGCTTTCCACC  290

seq1  TTCTTCTAGGGCCCACTGGATCATAGCCATGGGATGGGGCCCAGGAGAGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTAGGGCCCACTGGATCATAGCCATGGGATGGGGCCCAGGAGAGT  340

seq1  GGGCATTAAAAAATGTTTCTTAAAATAAACAGAGCCTGCTTAGCACATGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATTAAAAAATGTTTCTTAAAATAAACAGAGCCTGCTTAGCACATGC  390

seq1  TACCATTGAGCCACACCCCAGTTTGGGAGTAGAAGGTGGTTCTGAAGTAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATTGAGCCACACCCCAGTTTGGGAGTAGAAGGTGGTTCTGAAGTAT  440

seq1  GCTCACTGAGCTAGAGAAAGTACCCAAGGAGCTGGGGGGATCTGCAACCC  496
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGAGCTAGAGAAAGTACCCAAGGAGCTGGGGGGATCTGCAACCC  490

seq1  TATAGGTGGAACAACAATATGAACTAACCAGTACCTCCCAGAGCTCGTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGTGGAACAACAATATGAACTAACCAGTACCTCCCAGAGCTCGTGT  540

seq1  CTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCAGCCATCAGTGGAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCAGCCATCAGTGGAAA  590

seq1  GAGAGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGTACAGGGGAACG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCCCATTGGTTGTGCAAACTTTATATGCCTCAGTACAGGGGAACG  640

seq1  CCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGAAGAGTGGGTGGGGGAGGG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCCAAGAAGTGGGAGTGGGTGGGTGGAAGAGTGGGTGGGGGAGGG  690

seq1  TGTGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAAATAAATAACT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGGGACTTTTGGGATAGCATTGGAAATGTAAATGAAATAAATAACT  740

seq1  AATTAAAAAAGAGAGAGAGAAAGAAGCATTTATCTGTAGCAAAGATAATC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAGAGAGAGAGAAAGAAGCATTTATCTGTAGCAAAGATAATC  790

seq1  TGAGCTGATAAAAGCCAGTAAAGTGTGTGTCCGTGCCTGTGTGTGTGTGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTGATAAAAGCCAGTAAAGTGTGTGTCCGTGCCTGTGTGTGTGTGT  840

seq1  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  890

seq1  AAGAGAGAGAGAGAATACATGCAGGTATGCCTACATGTACACTTGTGAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGAGAGAGAATACATGCAGGTATGCCTACATGTACACTTGTGAAA  940

seq1  ACCAAGTTAGGTATTGTTCCTCCTTGTCTGCTGAGTCTCTCACTGGACGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGTTAGGTATTGTTCCTCCTTGTCTGCTGAGTCTCTCACTGGACGA  990

seq1  TTACGCCTAGCTGCCTGGCCAGCAAGCCCTGCGTTCCCTTCTTCCCGTCT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACGCCTAGCTGCCTGGCCAGCAAGCCCTGCGTTCCCTTCTTCCCGTCT  1040

seq1  ATGCAGGCAGCGCCTAGCTTTTTTATGCGGGTTCTGGGGACTGAATTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGGCAGCGCCTAGCTTTTTTATGCGGGTTCTGGGGACTGAATTC  1088