BAC Information

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BAC

Clone NameB6Ng01-276B01
Chromosome8 (Build37)
Map Location 130,107,616 - 130,108,708
singlet/doubletsinglet
Overlap genePard3
Upstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, EG628847
Downstream geneNrp1, LOC668494
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276B01.bB6Ng01-276B01.g
ACCGA076936GA076937
length1,1711,088
definitionB6Ng01-276B01.b B6Ng01-276B01.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttttgttctagaggtttcatgtgtgctgctaagttactaatgt
gagatctctcccgttttatttctgtgagcatataagagctctctgagaac
cacctttattgggtcccataagtttgtgtatgctgtgtattcattttcat
tcaaccctggaaagtctttcatttgtttctggaatcattttttattcagt
agtgagttgctcagttttcatgagtttgcaagctttctgctgtttctgtt
gtttatatacaactttaatctgaggtggtcaggtgggatcaggaagttat
ttcaattttcctgtatctgtcaagacttgctttgtatcccagtctgtggt
cagttttggagaaagttccatgagccgcccagaaaaagattcttgctgtt
gtttgtattgactggttttgtgcgtcaacttgacacaacctggagttatc
acagagaatggagcctcctttgagggaatgccgctatgagatccagctgt
aaggcattttctcaattagtgatcaaagggagagggcccagcccattgtg
ggtggtgccatccctgggcttgtaatcttgggttctataagaaagcaagc
tgagcaagccagaggaagcaagctagtaagcagcaccttccatggcctct
gcatcagctcctgcctccatgttcctgtcctgtgtgagttcctgtcctgc
cttcctttggtgataaagagcaatgtggatgtgtaagctgaataaaccct
tttctccccagcttgcttcttggttatgatattttgtgcaggaatacaaa
cctgactaagacaaattggtaccagcttagtggggtattcctgtgacagc
ctgaccatgttttggggaggactgtggaaggactttggaactttgggcta
gaagagccattgaatgttaagagttctgtgggatgttctgtagaagcttg
ggaagatatgttgaaaacagtgcaaatgattggacgccttggccttgtga
aatttcagaggaagatttaagactcttatcagggcccactgctatcctga
ttgtgaagatttcttgttggtcttgctaagctgaactgagaatcagcttg
cgattaatcagaatacctgaacctacctaatgcaaaaactttgtgccata
actggggaacaattgtaatgc
gaattcaatgaggaatctgcatttgcttactaatttacagcaactaagaa
cttgcttctgatgtatgatgcaaataaaaactgtcttcctgtcaacagaa
gattgggattattttatgggattactaactagcacagaacaagcccagtg
tcaggaggtggcttcctcagcttttagcaggtgccactggggtgcagtga
taccccctccatgattcgctgtctctgtgtaagagcttatctgcttctgc
tctatcatgctgactgtcccgaaaggcttacaacccctcacatccatagt
cgacatcacagtaagacattgctcagtgatgtgaggtgttgctggttgtg
gctgcctgtttccaagactgcttgacaagtatgccccacattggttgctc
ccattgtcagtctctttctgttcctgtctccctgttgctttaagtgacat
gtatgagatatctgtactttagattcagtgttgggacaaaatagggattc
acagttggacaccaggagcaggcagttctacaggaaagggattaacttag
tttgtcccagtcaacatgctttgaaaatgaacagtttgaggagtgcagag
gtggctcagctgtgtaagcacaagaacctgtgtttgatccccagaaccca
tgtataaaatgatgtgtgggtggtccacactctgtaaccctcatcccagg
gagtcagagtcacggggaacctagggcttgctgacctgtccaactcagca
aaacagatgagtgtgaacctgggttcagcaaaggaccttctatctctgta
aacaaagtggagagtgatcaaggaaaaaaaacctagcatcatcttttggt
acacatgtgtatgcatgtacacacacatagatgaataggatacctgtcaa
agtgatggaaacttctcagtaggaaaaaaaaaactttgattgagtataga
ttgcattatttccaggatctgaaatatttgggaaattaacttgtgttttt
aattagactagataatggcccctttgcatctcagttatgggtgcaaacac
aggtgtgaaatcactagcatttggcatagattttgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130107616_130108708
seq2: B6Ng01-276B01.g_66_1153

seq1  GAATTCAATGAGGAATCTGCATTTGCTTACTAATTTACAGCAACTAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGAGGAATCTGCATTTGCTTACTAATTTACAGCAACTAAGAA  50

seq1  CTTGCTTCTGATGTATGATGCAAATAAAAACTGTCTTCCTGTCAACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTCTGATGTATGATGCAAATAAAAACTGTCTTCCTGTCAACAGAA  100

seq1  GATTGGGATTATTTTATGGGATTACTAACTAGCACAGAACAAGCCCAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGGGATTATTTTATGGGATTACTAACTAGCACAGAACAAGCCCAGTG  150

seq1  TCAGGAGGTGGCTTCCTCAGCTTTTAGCAGGTGCCACTGGGGTGCAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAGGTGGCTTCCTCAGCTTTTAGCAGGTGCCACTGGGGTGCAGTGA  200

seq1  TACCCCCTCCATGATTCGCTGTCTCTGTGTAAGAGCTTATCTGCTTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCCCTCCATGATTCGCTGTCTCTGTGTAAGAGCTTATCTGCTTCTGC  250

seq1  TCTATCATGCTGACTGTCCCGAAAGGCTTACAACCCCTCACATCCATAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCATGCTGACTGTCCCGAAAGGCTTACAACCCCTCACATCCATAGT  300

seq1  CGACATCACAGTAAGACATTGCTCAGTGATGTGAGGTGTTGCTGGTTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATCACAGTAAGACATTGCTCAGTGATGTGAGGTGTTGCTGGTTGTG  350

seq1  GCTGCCTGTTTCCAAGACTGCTTGACAAGTATGCCCCACATTGGTTGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCTGTTTCCAAGACTGCTTGACAAGTATGCCCCACATTGGTTGCTC  400

seq1  CCATTGTCAGTCTCTTTCTGTTCCTGTCTCCCTGTTGCTTTAAGTGACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTCAGTCTCTTTCTGTTCCTGTCTCCCTGTTGCTTTAAGTGACAT  450

seq1  GTATGAGATATCTGTACTTTAGATTCAGTGTTGGGACAAAATAGGGATTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAGATATCTGTACTTTAGATTCAGTGTTGGGACAAAATAGGGATTC  500

seq1  ACAGTTGGACACCAGGAGCAGGCAGTTCTACAGGAAAGGGATTAACTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTTGGACACCAGGAGCAGGCAGTTCTACAGGAAAGGGATTAACTTAG  550

seq1  TTTGTCCCAGTCAACATGCTTTGAAAATGAACAGTTTGAGGAGTGCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCCCAGTCAACATGCTTTGAAAATGAACAGTTTGAGGAGTGCAGAG  600

seq1  GTGGCTCAGCTGTGTAAGCACAAGAACCTGTGTTTGATCCCCAGAACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCAGCTGTGTAAGCACAAGAACCTGTGTTTGATCCCCAGAACCCA  650

seq1  TGTATAAAATGATGTGTGGGTGGTCCACACTCTGTAACCCTCATCCCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAATGATGTGTGGGTGGTCCACACTCTGTAACCCTCATCCCAGG  700

seq1  GAGTCAGAGTCACGGGGAACCTAGGGCTTGCTGACCTGTCCAACTCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGAGTCACGGGGAACCTAGGGCTTGCTGACCTGTCCAACTCAGCA  750

seq1  AAACAGATGAGTGTGAACCTGGGTTCAGCAAAGGACCTTCTATCTCTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGATGAGTGTGAACCTGGGTTCAGCAAAGGACCTTCTATCTCTGTA  800

seq1  AACAAAGTGGAGAGTGATCAAGGAAAAAAAACCTAGCATCATCTTTTGGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTGGAGAGTGATCAAGGAAAAAAAACCTAGCATCATCTTTTGGT  850

seq1  ACACATGTGTATGCATGTACACACACATAGATGAATAGGATACCTGTCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGTGTATGCATGTACACACACATAGATGAATAGGATACCTGTCAA  900

seq1  AGTGATGGAAACTTCTCAGTAGGAAAAAAAAAACTTTGATTGAGTATAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGAAACTTCTCAGTAGGAAAAAAAAAACTTTGATTGAGTATAGA  950

seq1  TTGCATTATTTCCAGGATCTGAAATATTT-GGAAATTAACTTGTG-TTTT  998
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TTGCATTATTTCCAGGATCTGAAATATTTGGGAAATTAACTTGTGTTTTT  1000

seq1  AATTAGGACTAGAATAATGGCCCCTTTGCATCTCCAGTAATTGGGTGCCA  1048
      ||||| |||||| |||||||||||||||||||| |||| | |||||| ||
seq2  AATTA-GACTAG-ATAATGGCCCCTTTGCATCT-CAGTTA-TGGGTG-CA  1045

seq1  AACACAGGTGTGAAATTCACTAGCATTTGGAATAGAATTTTGAGC  1093
      ||||||||||||||| |||||||||||||| |||| |||||||||
seq2  AACACAGGTGTGAAA-TCACTAGCATTTGGCATAG-ATTTTGAGC  1088