BAC Information

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BAC

Clone NameB6Ng01-276B12
Chromosome8 (Build37)
Map Location 9,927,837 - 9,928,948
singlet/doubletsinglet
Overlap genenone
Upstream geneTmem28
Downstream geneLig4, Abhd13, Tnfsf13b, Myo16, LOC100040008, LOC384782, LOC100040507, LOC665306
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-276B12.bB6Ng01-276B12.g
ACCGA076958GA076959
length1,2081,109
definitionB6Ng01-276B12.b B6Ng01-276B12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggaggttcctca
gaaaattagacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctagaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atgtttggacctggaggacatcatcctgagtgaggtaacccaatcacaaa
ataactcaaatgaaatgtactcactggtaagtggatattagcccagaaac
ttagtatagcgagatataaggtacaatatgcaaaacacatgaaactgaat
tagaaagaagaccaaagtgtggacactttgctccttcttagaattggaaa
caatcacccatggaaggagttacagagacaaagtttggagctgagacaaa
aggatggaccatctagagactgccatatccagggatccatcccataatta
gcctccaagcgatgacaccatggcatacactagcaagcctttgctgcaag
gaccgtgatatagctgtcccttgtgagactaggctggggcctagcaaaca
cagaagtggatgctcacagtcaactattgggatggatcacagggccccta
atggaggagctagagaaagtatccaaaggagctaaagagatctgcaaccc
tatagtggaacaacaatatgaactaaccagtaccccagagcttcttgact
ctagctgcatatgtatcaaaagatggcctagtagcatcactggaagaaga
ggccccattgtcaagccaacctttatattgccccagttacagtgaacgtc
agggcctaaaaaatggcaattgggcgtggggattagggggaaagttgccc
acgtctcc
gaattccacactctagaagaatacccttcatgagcagcaggcgtttatga
gatgcacagacctgcatacaggcacaatatccattccagtagaattaaat
aaacacacacacacacacaaacatgcacatgtatgtgtgtgcacacgcat
gcatatgcacacccatgcatacactcatgtgtgcacatgcacacacctag
actacacagcagcactgaatgtatgctcactcatcagtgttttttgattg
cacaagattctcttcattggtctgtttgaaagttacgccttcataccttt
ccagcacattgagggaagttccatttgagtcagaataatccaaccatagg
ctatgcagaatgaggatgacattctgccatgtggcatttacatccttcca
tgggggacgcatttttaaggtgcttactttttgaaatgctgaagtgaaag
taaaagagggacgccgttctggaaatatgtgtcctttctgtcacctccaa
gttgttgattcctcagaaagatttcaattccattatgtatcaccaagtat
tatataaactgtcactttcacttaagttctaatttatttatttgttagtt
aagtttatttatgtgtatgctttcttttttctgtgtcctcagtgagttct
gtctcaactagataaatttagattctcttgcagtgataccttttaaccac
gtggagtcctgactgtgggtcatttacagaaatcagataaaggagccaga
tacagagcacctagctcaaggccacaagtctgagagataatcatgataga
ttgtgataatattgcaaagcaatacactctcataagcaagtgaccacaca
ctccagatgttaaagaatatctgctatttcaagggtagacactaggcact
aactgtgccacaagcttctacaaggctattgtcccaatataaaggttcct
ttaaagcatagagtatctggggtgaatgatacccgaggacaggccatgca
tgacctttaccataaaacatcatgcagttagtccttgatgaaaaaaaaac
tgcctttaagatagaatcaaagtgactacaagttaaaattcatctcttag
accctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_9927837_9928948
seq2: B6Ng01-276B12.g_66_1174 (reverse)

seq1  AAACAGGGTCTTAAGAGATGAATTTTAAACTGTAGTCACTTTGATTTCCT  50
      |||||||||| |||||||||||||||||  ||||||||||||||||  ||
seq2  AAACAGGGTC-TAAGAGATGAATTTTAACTTGTAGTCACTTTGATT--CT  47

seq1  ATC-TAAAGGCAGTTTTTTTTTCATCCAAGGACTAAACTGCATGATG-TT  98
      ||| ||||||||||||||||||||| |||||||| |||||||||||| ||
seq2  ATCTTAAAGGCAGTTTTTTTTTCAT-CAAGGACT-AACTGCATGATGTTT  95

seq1  TATGGTAAAGGGTCATGCATGGCCTGTCCTCGGGTATCATTCA-CCCAGA  147
      ||||||||| ||||||||||||||||||||||||||||||||| ||||||
seq2  TATGGTAAA-GGTCATGCATGGCCTGTCCTCGGGTATCATTCACCCCAGA  144

seq1  TACTCTATGCTTTAAAGGAACCTTTATATTTGGGACAATAGCCTTGTAGA  197
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TACTCTATGCTTTAAAGGAACCTTTATA-TTGGGACAATAGCCTTGTAGA  193

seq1  AGCTTGTGGCACAGTTAGTGCCTAGTGTCTA-CCTTGAAATAGCAGATAT  246
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGCTTGTGGCACAGTTAGTGCCTAGTGTCTACCCTTGAAATAGCAGATAT  243

seq1  TCTTTAACATCTGGAGTGTGTGGTCACTTGCTTATGAGAGTGTATTGCTT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTAACATCTGGAGTGTGTGGTCACTTGCTTATGAGAGTGTATTGCTT  293

seq1  TGCAATATTATCACAATCTATCATGATTATCTCTCAGACTTGTGGCCTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTATCACAATCTATCATGATTATCTCTCAGACTTGTGGCCTTG  343

seq1  AGCTAGGTGCTCTGTATCTGGCTCCTTTATCTGATTTCTGTAAATGACCC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGGTGCTCTGTATCTGGCTCCTTTATCTGATTTCTGTAAATGACCC  393

seq1  ACAGTCAGGACTCCACGTGGTTAAAAGGTATCACTGCAAGAGAATCTAAA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGGACTCCACGTGGTTAAAAGGTATCACTGCAAGAGAATCTAAA  443

seq1  TTTATCTAGTTGAGACAGAACTCACTGAGGACACAGAAAAAAGAAAGCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTAGTTGAGACAGAACTCACTGAGGACACAGAAAAAAGAAAGCAT  493

seq1  ACACATAAATAAACTTAACTAACAAATAAATAAATTAGAACTTAAGTGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATAAATAAACTTAACTAACAAATAAATAAATTAGAACTTAAGTGAA  543

seq1  AGTGACAGTTTATATAATACTTGGTGATACATAATGGAATTGAAATCTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAGTTTATATAATACTTGGTGATACATAATGGAATTGAAATCTTT  593

seq1  CTGAGGAATCAACAACTTGGAGGTGACAGAAAGGACACATATTTCCAGAA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAATCAACAACTTGGAGGTGACAGAAAGGACACATATTTCCAGAA  643

seq1  CGGCGTCCCTCTTTTACTTTCACTTCAGCATTTCAAAAAGTAAGCACCTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCGTCCCTCTTTTACTTTCACTTCAGCATTTCAAAAAGTAAGCACCTT  693

seq1  AAAAATGCGTCCCCCATGGAAGGATGTAAATGCCACATGGCAGAATGTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATGCGTCCCCCATGGAAGGATGTAAATGCCACATGGCAGAATGTCA  743

seq1  TCCTCATTCTGCATAGCCTATGGTTGGATTATTCTGACTCAAATGGAACT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTCTGCATAGCCTATGGTTGGATTATTCTGACTCAAATGGAACT  793

seq1  TCCCTCAATGTGCTGGAAAGGTATGAAGGCGTAACTTTCAAACAGACCAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAATGTGCTGGAAAGGTATGAAGGCGTAACTTTCAAACAGACCAA  843

seq1  TGAAGAGAATCTTGTGCAATCAAAAAACACTGATGAGTGAGCATACATTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGAATCTTGTGCAATCAAAAAACACTGATGAGTGAGCATACATTC  893

seq1  AGTGCTGCTGTGTAGTCTAGGTGTGTGCATGTGCACACATGAGTGTATGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGCTGTGTAGTCTAGGTGTGTGCATGTGCACACATGAGTGTATGC  943

seq1  ATGGGTGTGCATATGCATGCGTGTGCACACACATACATGTGCATGTTTGT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTGTGCATATGCATGCGTGTGCACACACATACATGTGCATGTTTGT  993

seq1  GTGTGTGTGTGTGTTTATTTAATTCTACTGGAATGGATATTGTGCCTGTA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTTTATTTAATTCTACTGGAATGGATATTGTGCCTGTA  1043

seq1  TGCAGGTCTGTGCATCTCATAAACGCCTGCTGCTCATGAAGGGTATTCTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTCTGTGCATCTCATAAACGCCTGCTGCTCATGAAGGGTATTCTT  1093

seq1  CTAGAGTGTGGAATTC  1112
      ||||||||||||||||
seq2  CTAGAGTGTGGAATTC  1109