BAC Information

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BAC

Clone NameB6Ng01-277H08
Chromosome8 (Build37)
Map Location 63,118,276 - 63,119,356
singlet/doubletsinglet
Overlap geneMfap3l
Upstream geneAadat
Downstream geneLOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1, Sh3rf1, EG664975, Cbr4, Palld
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277H08.bB6Ng01-277H08.g
ACCGA077974GA077975
length1,1311,086
definitionB6Ng01-277H08.b B6Ng01-277H08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgtttagatctgtatttccatttttaattggtttgtttttct
gatatctattcaagaattctttatatactttagatattagccctctatca
aatatggagacagtaaaaacttttcctactctatagactgccatttcatc
caattaatggtgtctttgcttttcagtttattaagtgttgatcttagtgc
ctgcacaatctgtgttctgttcaagaagtctcctgtgccagtgcgttcaa
ggctcttccccactttcatttccaccatgctcagtgtatctagttttatg
ttgaggttttttatctgtttggacttgagtaacgtacagagtgataggtt
tgcaactatttgcactcttctacatgcagccatccaatttgaccagaacc
atttgttgaaaatgctgtcttttttccagtgtatatttctgttttttttt
ttttatcaaaaaccaggtgatgtgtaggtatgtagatttatgtctgagtc
ttcaattcagttgatcaaagtgtctatttttatgccaataccacacagtt
tttattactatagtacaacttgaaatcaaagatggtgatgcctttagcag
ttcttttatgttcagaattggtttagctatcctgggttttgttttctttt
atttatttgttcatttgtttatttttatttttccatatgaagttgagaat
tcctttcaaggtctgtgaagaattgatttgtgatagaatggccattttta
ctgtgttgacctactgatccatgaacataggagatctttccatcttgtga
atcttcttcaaacttctttttcaaaacgtgatgtttttgtcatacaaact
tttccatttgcttggatagagtaaataagatgatttatattatttgaggc
tattgtaaaagtgttggttctctgatttctttctctcttcgttgttggtt
atagaaaggctactgatttttttaaaattaacctggtatccaccttactt
cttctgaagtgtttgtcgctggacagttctggatatttttcgatcactaa
tcatatcatctgcaatatatttggactctcgttcctatttggatcactgg
ctctcctacaggttgcctacctgctctagct
gaattccttcatttatatctccctcacagcgtggatgcactgcaatggta
aaatggttcacatatatgggctcgggcttgggcattcattaccttctctt
cctgctttaagtgtgtacagtggaaattcatctctctggagcttccagtt
ctgccctggtatagagccaggaggagtttcaccaagcaggagtgcctcca
tttatatgcaacgcctgacaatctaattaattgccccagagatgttttca
acgcctcccttcgtttcctgcccagatgtacaaatcgatcgccgagtcct
agcaagtcccgctcctaggcatttggccaccaccctgcttcttttgccct
ggtgctcatcacctcgtcaggcaccaccctgagacactccttcctccttg
atttgcgtccaacccgcgtgcccacgcgcccacgtgccttccgtacacaa
gcctcgttggcgtagtcagctgactccccagaatctaactgaaaacatac
tccaaaggctatggatacagctcagttcacagagtgtttgtctggtatgc
atttgggcctgggttcaaatcctaggactacaaacaaaacaaaatgaaca
aataaaacatcattttgttctgaggacacatagcttttcatgctgttctt
tattctgagccctcaatttactgtcatcctggttccctctctccgtctgt
gctcttttactgacatcttatgctgttctcatagaacctctgtggcttct
aatgctgtcttccttcccttacccacctggaaaggccctacctacatggg
gagtcttggttaaaaggcctcaacttcaccccaaactccattatttcagg
ttattgccttttgtgtatgcccgtccctccaatggagagaggatgatgaa
atctcagactgtcaacttttgctgaatgaatgcatgagttaatgcatgga
tataagattatatttgagagatgctggttgaaatacagatgtggaaatat
tgaggtatggtgaatgatgggtgcagtccacagggaaaactcagttactc
agaaacagcctaagtagctttacaaattcagaagat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_63118276_63119356
seq2: B6Ng01-277H08.g_64_1149 (reverse)

seq1  ATCTTCTG-ATTTGT-AAGCTACTTA-GCTGTTTCTGAGTAACTG-GGTT  46
      |||||||| |||||| |||||||||| |||||||||||||||||| | ||
seq2  ATCTTCTGAATTTGTAAAGCTACTTAGGCTGTTTCTGAGTAACTGAGTTT  50

seq1  TCCCTGT-GACTGCACCCATCATTCACCATACCTCAATATTTCCACATCT  95
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGGACTGCACCCATCATTCACCATACCTCAATATTTCCACATCT  100

seq1  GTATTTCAAACCAGCATCTCTCAAATAT-ATCTTATATCCATGCATTAAC  144
      ||||||| |||||||||||||||||||| |||||||||||||||||||||
seq2  GTATTTC-AACCAGCATCTCTCAAATATAATCTTATATCCATGCATTAAC  149

seq1  TCATGCATTCATTCAGCAAAAGTTGACAGTCTGAGATTTCATCATCCTCT  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCATTCATTCAGCAAAAGTTGACAGTCTGAGATTTCATCATCCTCT  199

seq1  CTCCATTGGAGGGACGGGCATACACAAAAGGCAATAACCTGAAATAATGG  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTGGAGGGACGGGCATACACAAAAGGCAATAACCTGAAATAATGG  249

seq1  AGTTTGGGGTGAAGTTGAGGCCTTTTAACCAAGACTCCCCATGTAGGTAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGGGGTGAAGTTGAGGCCTTTTAACCAAGACTCCCCATGTAGGTAG  299

seq1  GGCCTTTCCAGGTGGGTAAGGGAAGGAAGACAGCATTAGAAGCCACAGAG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCCAGGTGGGTAAGGGAAGGAAGACAGCATTAGAAGCCACAGAG  349

seq1  GTTCTATGAGAACAGCATAAGATGTCAGTAAAAGAGCACAGACGGAGAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATGAGAACAGCATAAGATGTCAGTAAAAGAGCACAGACGGAGAGA  399

seq1  GGGAACCAGGATGACAGTAAATTGAGGGCTCAGAATAAAGAACAGCATGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAACCAGGATGACAGTAAATTGAGGGCTCAGAATAAAGAACAGCATGA  449

seq1  AAAGCTATGTGTCCTCAGAACAAAATGATGTTTTATTTGTTCATTTTGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTATGTGTCCTCAGAACAAAATGATGTTTTATTTGTTCATTTTGTT  499

seq1  TTGTTTGTAGTCCTAGGATTTGAACCCAGGCCCAAATGCATACCAGACAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTAGTCCTAGGATTTGAACCCAGGCCCAAATGCATACCAGACAA  549

seq1  ACACTCTGTGAACTGAGCTGTATCCATAGCCTTTGGAGTATGTTTTCAGT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGTGAACTGAGCTGTATCCATAGCCTTTGGAGTATGTTTTCAGT  599

seq1  TAGATTCTGGGGAGTCAGCTGACTACGCCAACGAGGCTTGTGTACGGAAG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCTGGGGAGTCAGCTGACTACGCCAACGAGGCTTGTGTACGGAAG  649

seq1  GCACGTGGGCGCGTGGGCACGCGGGTTGGACGCAAATCAAGGAGGAAGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGTGGGCGCGTGGGCACGCGGGTTGGACGCAAATCAAGGAGGAAGGA  699

seq1  GTGTCTCAGGGTGGTGCCTGACGAGGTGATGAGCACCAGGGCAAAAGAAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTCAGGGTGGTGCCTGACGAGGTGATGAGCACCAGGGCAAAAGAAG  749

seq1  CAGGGTGGTGGCCAAATGCCTAGGAGCGGGACTTGCTAGGACTCGGCGAT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTGGTGGCCAAATGCCTAGGAGCGGGACTTGCTAGGACTCGGCGAT  799

seq1  CGATTTGTACATCTGGGCAGGAAACGAAGGGAGGCGTTGAAAACATCTCT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATTTGTACATCTGGGCAGGAAACGAAGGGAGGCGTTGAAAACATCTCT  849

seq1  GGGGCAATTAATTAGATTGTCAGGCGTTGCATATAAATGGAGGCACTCCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCAATTAATTAGATTGTCAGGCGTTGCATATAAATGGAGGCACTCCT  899

seq1  GCTTGGTGAAACTCCTCCTGGCTCTATACCAGGGCAGAACTGGAAGCTCC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTGAAACTCCTCCTGGCTCTATACCAGGGCAGAACTGGAAGCTCC  949

seq1  AGAGAGATGAATTTCCACTGTACACACTTAAAGCAGGAAGAGAAGGTAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGATGAATTTCCACTGTACACACTTAAAGCAGGAAGAGAAGGTAAT  999

seq1  GAATGCCCAAGCCCGAGCCCATATATGTGAACCATTTTACCATTGCAGTG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCCAAGCCCGAGCCCATATATGTGAACCATTTTACCATTGCAGTG  1049

seq1  CATCCACGCTGTGAGGGAGATATAAATGAAGGAATTC  1081
      |||||||||||||||||||||||||||||||||||||
seq2  CATCCACGCTGTGAGGGAGATATAAATGAAGGAATTC  1086