BAC Information

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BAC

Clone NameB6Ng01-278D17
Chromosome8 (Build37)
Map Location 118,066,114 - 118,102,061
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox
Downstream geneMaf, LOC384868, LOC668233, Dynlrb2, Cdyl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278D17.bB6Ng01-278D17.g
ACCGA078531GA078532
length467928
definitionB6Ng01-278D17.b B6Ng01-278D17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,066,114 - 118,066,586)(118,101,134 - 118,102,061)
sequence
ttcaaacatagggaattggatgttcaatacgtgtaattttctggatcatg
aatggtatggggaaccatctgttggagctggtaaactgcagcctgtggac
caggttaggtcccctacacttacatttgtaaataaatctctattggaatt
ccatcctacttgtttgtataataaccatggctgttcgcctgtagtcatgt
agttttccagcaggcagacatggctaccatccacagaagcttcaaggcag
gctggggtgggagtgttcccatcttgaacaattcagacagaaattatgtg
tctcacgaagaagcctaaactatttcttattcataaccaaagcccaccaa
ctcctatggtaagccccaggaatcaacacacaaccgcttccatggggctg
gccgctcagctgtaggggccctcattttctatgcaaacttgctcttcaag
ctttgtattttgccctg

gaattcaggaatgaaacagactacagagccccaaataaaataagatacac
aggagaatacgtagtgtatcatacaagtaatatttccaattaagataaaa
cagatgactgagataactggatatctacatttttgctagttacctacgta
cattttattttaaaattacatgaaatatttaaaattttggaataagatct
tgagagtcatatgccaaatgctacaggaaaatattaataaatttggttac
tgtcatggcgagttttaattgtcaggtcaatacaacttagaaccatcagg
gaagaacatctcaaggaaggactgactagattaggttggcctgtcggcac
atccatcgtgggctgtgttcatttcgttgaatgatatgggaagattctgc
cccaaagaagctgtaccattccctgggtttgatcctattctgcatcatca
ttaaaaaaaaaaaaaaaaaaaaaaaaaggtgaaattgagctgagtacaag
caagcatacattctctctctctctctctctctgtctctcctctctctatg
tctctctgtctctctctctctgtctctgtctctctgtctctctctctgtc
tctgtctctgtctctctctctctctctctctccctctctctctctctctg
aattagactgtgaacgggatcagttgcatctccctggtaagataggctct
agcctggacctgtgagttaaaatgagcactttctctcctaagttgctttt
gttgatattttatcataagagagacaaagcacagttaccacgcactgcaa
accatttacataataagacagcatagacaagatcaggaactttgttttag
gacatttcagcaaggatatggaaacctagtgcaatgaactccctggggat
ttagggtatgtggggtggggggtggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118066114_118066586
seq2: B6Ng01-278D17.b_50_522

seq1  GAATTCTTCAAACATAGGGAATTGGATGTTCAATACGTGTAATTTTCTGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAAACATAGGGAATTGGATGTTCAATACGTGTAATTTTCTGG  50

seq1  ATCATGAATGGTATGGGGAACCATCTGTTGGAGCTGGTAAACTGCAGCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGAATGGTATGGGGAACCATCTGTTGGAGCTGGTAAACTGCAGCCT  100

seq1  GTGGACCAGGTTAGGTCCCCTACACTTACATTTGTAAATAAATCTCTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACCAGGTTAGGTCCCCTACACTTACATTTGTAAATAAATCTCTATT  150

seq1  GGAATTCCATCCTACTTGTTTGTATAATAACCATGGCTGTTCGCCTGTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCATCCTACTTGTTTGTATAATAACCATGGCTGTTCGCCTGTAG  200

seq1  TCATGTAGTTTTCCAGCAGGCAGACATGGCTACCATCCACAGAAGCTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTAGTTTTCCAGCAGGCAGACATGGCTACCATCCACAGAAGCTTCA  250

seq1  AGGCAGGCTGGGGTGGGAGTGTTCCCATCTTGAACAATTCAGACAGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGGCTGGGGTGGGAGTGTTCCCATCTTGAACAATTCAGACAGAAAT  300

seq1  TATGTGTCTCACGAAGAAGCCTAAACTATTTCTTATTCATAACCAAAGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGTCTCACGAAGAAGCCTAAACTATTTCTTATTCATAACCAAAGCC  350

seq1  CACCAACTCCTATGGTAAGCCCCAGGAATCAACACACAACCGCTTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACTCCTATGGTAAGCCCCAGGAATCAACACACAACCGCTTCCATG  400

seq1  GGGCTGGCCGCTCAGCTGTAGGGGCCCTCATTTTCTATGCAAACTTCCTC  450
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GGGCTGGCCGCTCAGCTGTAGGGGCCCTCATTTTCTATGCAAACTTGCTC  450

seq1  TTCAAGCTTTGTATTTTGCCCTG  473
      |||||||||||||||||||||||
seq2  TTCAAGCTTTGTATTTTGCCCTG  473


seq1: chr8_118101134_118102061
seq2: B6Ng01-278D17.g_66_993 (reverse)

seq1  CCCCCACCCCC--ACCCACATACCCTAAATCCCCAGGGAGTTCATTGCAC  48
      |||||||||||   ||||||||||||||||||||||||||||||||||||
seq2  CCCCCACCCCCCACCCCACATACCCTAAATCCCCAGGGAGTTCATTGCAC  50

seq1  TAGGTTTCCATATCCTTGCTGAAATGTCCCCTAAAACAAAGTTCCTGATC  98
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  TAGGTTTCCATATCCTTGCTGAAATGT--CCTAAAACAAAGTTCCTGATC  98

seq1  TTGTCTATGCTGTCTTATTATGTAAATGGTTTGCAGTGCGTGGTAACTGT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTATGCTGTCTTATTATGTAAATGGTTTGCAGTGCGTGGTAACTGT  148

seq1  GCTTTGTCTCTCTTATGATAAAATATCAACAAAAGCAACTTAGGAGAGAA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGTCTCTCTTATGATAAAATATCAACAAAAGCAACTTAGGAGAGAA  198

seq1  AGTGCTCATTTTAACTCACAGGTCCAGGCTAGAGCCTATCTTACCAGGGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTCATTTTAACTCACAGGTCCAGGCTAGAGCCTATCTTACCAGGGA  248

seq1  GATGCAACTGATCCCGTTCACAGTCTAATTCAGAGAGAGAGAGAGAGGGA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAACTGATCCCGTTCACAGTCTAATTCAGAGAGAGAGAGAGAGGGA  298

seq1  GAGAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAGAGAGACAGAGA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGACAGAGACAGAGACAGAGAGAGAGACAGAGA  348

seq1  GACAGAGACAGAGAGAGAGAGACAGAGAGACATAGAGAGAGGAGAGACAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAGACAGAGAGAGAGAGACAGAGAGACATAGAGAGAGGAGAGACAG  398

seq1  AGAGAGAGAGAGAGAGAGAATGTATGCTTGCTTGTACTCAGCTCAATTTC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAATGTATGCTTGCTTGTACTCAGCTCAATTTC  448

seq1  ACCTTTTTTTTTTTTTTTTTTTTTTTTTAATGATGATGCAGAATAGGATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTTTTTTTTTTTTTTTTTTTTTTTAATGATGATGCAGAATAGGATC  498

seq1  AAACCCAGGGAATGGTACAGCTTCTTTGGGGCAGAATCTTCCCATATCAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAGGGAATGGTACAGCTTCTTTGGGGCAGAATCTTCCCATATCAT  548

seq1  TCAACGAAATGAACACAGCCCACGATGGATGTGCCGACAGGCCAACCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACGAAATGAACACAGCCCACGATGGATGTGCCGACAGGCCAACCTAA  598

seq1  TCTAGTCAGTCCTTCCTTGAGATGTTCTTCCCTGATGGTTCTAAGTTGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCAGTCCTTCCTTGAGATGTTCTTCCCTGATGGTTCTAAGTTGTA  648

seq1  TTGACCTGACAATTAAAACTCGCCATGACAGTAACCAAATTTATTAATAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTGACAATTAAAACTCGCCATGACAGTAACCAAATTTATTAATAT  698

seq1  TTTCCTGTAGCATTTGGCATATGACTCTCAAGATCTTATTCCAAAATTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTAGCATTTGGCATATGACTCTCAAGATCTTATTCCAAAATTTT  748

seq1  AAATATTTCATGTAATTTTAAAATAAAATGTACGTAGGTAACTAGCAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTTCATGTAATTTTAAAATAAAATGTACGTAGGTAACTAGCAAAA  798

seq1  ATGTAGATATCCAGTTATCTCAGTCATCTGTTTTATCTTAATTGGAAATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATATCCAGTTATCTCAGTCATCTGTTTTATCTTAATTGGAAATA  848

seq1  TTACTTGTATGATACACTACGTATTCTCCTGTGTATCTTATTTTATTTGG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTGTATGATACACTACGTATTCTCCTGTGTATCTTATTTTATTTGG  898

seq1  GGCTCTGTAGTCTGTTTCATTCCTGAATTC  928
      ||||||||||||||||||||||||||||||
seq2  GGCTCTGTAGTCTGTTTCATTCCTGAATTC  928


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