BAC Information

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BAC

Clone NameB6Ng01-278I15
Chromosome8 (Build37)
Map Location 120,040,397 - 120,041,473
singlet/doubletsinglet
Overlap genePlcg2
Upstream geneCdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik
Downstream gene4632417N05Rik, Hsd17b2, Mphosph6, Cdh13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278I15.bB6Ng01-278I15.g
ACCGA078756GA078757
length1,0761,161
definitionB6Ng01-278I15.b B6Ng01-278I15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagatccttcagatgattccgtggcaagaactctatttgctgagg
cctctcccagctccctgacactttaaacataattctctcgactaatgcat
ttgctagacctggctttccagtttttggtagtttgaatctgccctacatc
agtcttcctcccatgttgtttgaaattagtcccgtgtttaaggtttgttt
cttcaacgggtgtctgctttttgggtttttatgttatcccatgttttcct
atatcaaatattgtttctgggaacttttttttttttttaatagctaaact
taggcaaattctctgtggttttcactggatagatttctaaacacagctgt
gtggtgggcttggatgatgtggtcagttttcctaaggagactctagcttc
tgtcccgctcccgccccatcatccactctcaccaggatgcaggcttcagc
ctttagaggcctgcagtggagcagcagaaactgtgcttgctgcagtcagg
tgtggcaaggctttcttcccgcctgcgggctgtttgttctggcccaggcc
cgccaagccaaacctcaggactgagcaggctgcttttggctggagggctg
cggaggctgcctcagcaccagctagatggaatggaggatgggggaacttt
ggagccttttcctgtgtggctgaggcggccagcccagcctttctttcact
ccacatgtcaggtctgggaagtagtatgcttttccagtctcctcagggcg
agaggtctggtttgagggaaatcaggaagtcccgggtgggggtaggcatg
aagatccaagtgcagccctcagcatctaagtgaaacagttgggtggtttg
gcacgatgtttgctatccatgcgctggggaggggagcagagatggattcc
tgggacttgctgatcagcatcctttccaagcatgtaggcaatcccactcc
atcccgctccccgccaggcatctccccttgggacctcatcaagtagctcc
aaggggagagaaacgaggtgtgtagttcctgaagaacagcactggagttc
cgctttgggcatgacatgtactatgt
gaattctgtcttggttaggtgtttactgctgtgaacaggctccatgacca
agacaactcttataaagacaacatttaattggggctggcttacgttttca
taggttcagtccattatcatcaagacggatgtgtggcaacatccaggcag
gcatggtgcaggaggaactaagagttctacatctttatctggagggtggt
aggagaagactggctcccatgtggctaggataaagagcttaaaggccacg
cccacagtgacccacttcctctaacaaggccacacctccaaatagtgggc
caagcgtattcaaaccaccaccacagattacttctctgatttacttaact
ccatgaacgcgtaggctagctgctgcgttttatatgtcagttctgagttc
tgtgacccatctatcagttctaatagtctcttggtagagtctttagtgga
ctttcatcatttggaaacaagaataatcccccttctcccttcctactcat
ccccgcggtatcctttctcttgcctacttgctccaataagattctcgcca
tgtattggtgagagtgacaggagtggacacccttagcttgttcatgatct
tataaaaaatacttccttttcctcgtttgtaagacataaactatgacctt
gtcacagaagcctttactatattgacgtgtgatctttttacaccaaattt
gttcaagacttttacaatgaagggaagttggatttaatgaaatgttcttt
tgacatctctggcgaagatcatgtgggttttttttttcccttgactgttt
attcttatgtattacatttattgatttgagtgtcttgaacctctttgtat
tcctggaattaagccaatacgattacggtgtgtgatctttctattgtgca
gatgaatttaatctgcaaatatttttcttgaagacttttgccccttgatc
attagaggtttcttttgatgttgcccttgtccaggtttggtgggcatcgg
tgtctatttctgtatgttacatttccacattaaggtttatgtgtctgttg
atgacttcatctcctgtgtgtagactttctcattaagcagcttctgtggt
ggacgttggtcatcgtcttatgatagatggtcagctgaaccctgtaacgg
aatctcttcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_120040397_120041473
seq2: B6Ng01-278I15.b_44_1119

seq1  GAATTCAGATCCTTCAGATGATTCCGTGGCAAGAACTCTATTTGCTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCTTCAGATGATTCCGTGGCAAGAACTCTATTTGCTGAGG  50

seq1  CCTCTCCCAGCTCCCTGACACTTTAAACATAATTCTCTCGACTAATGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCCAGCTCCCTGACACTTTAAACATAATTCTCTCGACTAATGCAT  100

seq1  TTGCTAGACCTGGCTTTCCAGTTTTTGGTAGTTTGAATCTGCCCTACATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGACCTGGCTTTCCAGTTTTTGGTAGTTTGAATCTGCCCTACATC  150

seq1  AGTCTTCCTCCCATGTTGTTTGAAATTAGTCCCGTGTTTAAGGTTTGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCTCCCATGTTGTTTGAAATTAGTCCCGTGTTTAAGGTTTGTTT  200

seq1  CTTCAACGGGTGTCTGCTTTTTGGGTTTTTATGTTATCCCATGTTTTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAACGGGTGTCTGCTTTTTGGGTTTTTATGTTATCCCATGTTTTCCT  250

seq1  ATATCAAATATTGTTTCTGGGAACTTTTTTTTTTTTTTAATAGCTAAACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCAAATATTGTTTCTGGGAACTTTTTTTTTTTTTTAATAGCTAAACT  300

seq1  TAGGCAAATTCTCTGTGGTTTTCACTGGATAGATTTCTAAACACAGCTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCAAATTCTCTGTGGTTTTCACTGGATAGATTTCTAAACACAGCTGT  350

seq1  GTGGTGGGCTTGGATGATGTGGTCAGTTTTCCTAAGGAGACTCTAGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGGGCTTGGATGATGTGGTCAGTTTTCCTAAGGAGACTCTAGCTTC  400

seq1  TGTCCCGCTCCCGCCCCATCATCCACTCTCACCAGGATGCAGGCTTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCGCTCCCGCCCCATCATCCACTCTCACCAGGATGCAGGCTTCAGC  450

seq1  CTTTAGAGGCCTGCAGTGGAGCAGCAGAAACTGTGCTTGCTGCAGTCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGAGGCCTGCAGTGGAGCAGCAGAAACTGTGCTTGCTGCAGTCAGG  500

seq1  TGTGGCAAGGCTTTCTTCCCGCCTGCGGGCTGTTTGTTCTGGCCCAGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCAAGGCTTTCTTCCCGCCTGCGGGCTGTTTGTTCTGGCCCAGGCC  550

seq1  CGCCAAGCCAAACCTCAGGACTGAGCAGGCTGCTTTTGGCTGGAGGGCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCAAGCCAAACCTCAGGACTGAGCAGGCTGCTTTTGGCTGGAGGGCTG  600

seq1  CGGAGGCTGCCTCAGCACCAGCTAGATGGAATGGAGGATGGGGGAACTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGGCTGCCTCAGCACCAGCTAGATGGAATGGAGGATGGGGGAACTTT  650

seq1  GGAGCCTTTTCCTGTGTGGCTGAGGCGGCCAGCCCAGCCTTTCTTTCACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCTTTTCCTGTGTGGCTGAGGCGGCCAGCCCAGCCTTTCTTTCACT  700

seq1  CCACATGTCAGGTCTGGGAAGTAGTATGCTTTTCCAGTCTCCTCAGGGCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGTCAGGTCTGGGAAGTAGTATGCTTTTCCAGTCTCCTCAGGGCG  750

seq1  AGAGGTCTGGTTTGAGGGAAATCAGGAAGTCCCGGGTGGGGGTAGGCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTCTGGTTTGAGGGAAATCAGGAAGTCCCGGGTGGGGGTAGGCATG  800

seq1  AAGATCCAAGTGCAGCCCTCAGCATCTAAGTGAAACAGTTGGGTGGTTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCCAAGTGCAGCCCTCAGCATCTAAGTGAAACAGTTGGGTGGTTTG  850

seq1  GCACGATGTTTGCTATCCATGCGCTGGGGAGGGGAGCAGAGATGGATTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGATGTTTGCTATCCATGCGCTGGGGAGGGGAGCAGAGATGGATTCC  900

seq1  TGGGACTTGCTGATCAGCATCCTTTCCAAGCATGTAGGCAATCCCACTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACTTGCTGATCAGCATCCTTTCCAAGCATGTAGGCAATCCCACTCC  950

seq1  ATCCCGCTCCCCGCCAGGCATCTCCCCTTGGGAACTTCATCAGGTAAGCT  1000
      |||||||||||||||||||||||||||||||| || |||||| || ||||
seq2  ATCCCGCTCCCCGCCAGGCATCTCCCCTTGGG-ACCTCATCAAGT-AGCT  998

seq1  CC-AGGGGAGAGAAACGAGGTGTGTAGTTCCTGAAGAACAGCACCTGAGT  1049
      || |||||||||||||||||||||||||||||||||||||||||  ||||
seq2  CCAAGGGGAGAGAAACGAGGTGTGTAGTTCCTGAAGAACAGCACTGGAGT  1048

seq1  TCTGGCTTTGGCATGACTATGTAC-ATGT  1077
      || |  || |||||||| |||||| ||||
seq2  TCCGCTTTGGGCATGAC-ATGTACTATGT  1076