BAC Information

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BAC

Clone NameB6Ng01-280C12
Chromosome8 (Build37)
Map Location 18,008,821 - 18,009,318
singlet/doubletsinglet
Overlap genenone
Upstream geneCsmd1
Downstream geneLOC665638, LOC100040466, Mcph1, Angpt2, Agpat5, LOC100040486, Xkr5, Defb40, Defb37
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280C12.bB6Ng01-280C12.g
ACCGA079956GA079957
length4921,187
definitionB6Ng01-280C12.b B6Ng01-280C12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aatctccactctaactccttttgtgtgcgtctacctcaaatccatgaaga
tatttatgcaagatgtttcgaaacagagagagacttatcctgaggattgt
tcccttactatcatattaacatctgataatcgtttagtttcctaaagtct
ctctgcattcttcagtcctacaatgaaatcataattatgaaatgtaatca
agatgcccctgtattaatcatgatatccctgtgttaagcctgtcattttt
ctatctgtcacctaaagcctagattctaaatattctggcacagagaaacg
gatcaagaactacccaacctatttattcagatccatccatcttcttccgg
ttctattagtaaaccacaccaaaacttttgagcccatcataccatttaaa
gatgccctggaagaattctcttgatttatattgttcaatttaaatgcgcg
cgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcgaatgctttctttgcgtctaaggagatgatcatgtggtttttgtcttt
gagtttgtttatataatagattacgttgatggatttccgaatattaaacc
atccatgcatccctggaataaaacctacttggtcaggatggatgattatt
ttaatgttcttggattcagttagtgaaaattttagtgagtatttttgcat
ccatgttcataagggaaattggtctgaagttctctatctttgttggatct
ttctgtggtttaggtatcagagtaattgtggcttcatagaatgagttggg
tagagtaccttctacttctattttgtggaatagtttgtgcagaactggaa
gtagatcttctttgaaggtctgatagaactctaccctaaacccatctggt
cctgggctttttttggttgggagactattaatgactgcttctatttcttt
aggggatatggtattgtttagattgttaacttgatcctgatttaactttg
gtacctggtatctgtctagaaacttgtccatttcatccaggttttccagt
tttgttgagtatagccttttgtagaaggatctgatggtattttggatttc
ttcaggatctgttgttatgtttcccttttcatttctaaattttttaaatt
aggatgctgtccctgtgccctctactgtgtctggctaagggtttatctat
cttgttgattttctcaaagaaccagctcctcatttggttgattctttgaa
tagttcttcttgtttccacttgggttgattttgctcctgagtttgattat
tttctgccatctactcctcttgggtgaatttttcttctttttttctagag
cttttgaggtgtgttgtccagcttgctagtgtgtgcctctcttctagttt
cctttttggaagcaactcagagctatatgagtttccctcctagaaatgct
tttcattatgtcccatattgtttgggccatgtgtggcttcattttccatt
aaacctctaaaaagtcttaaattctttgttttatccttcccttgacaagg
ttaacttgagaagagtgttgctcaatttccatgtgaagttggctttccat
tactaagccgtgattatgaagaatcagcccttaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_18008821_18009318
seq2: B6Ng01-280C12.b_47_544

seq1  GAATTCAATCTCCACTCTAACTCCTTTTGTGTGCGTCTACCTCAAATCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCTCCACTCTAACTCCTTTTGTGTGCGTCTACCTCAAATCCA  50

seq1  TGAAGATATTTATGCAAGATGTTTCGAAACAGAGAGAGACTTATCCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATATTTATGCAAGATGTTTCGAAACAGAGAGAGACTTATCCTGAG  100

seq1  GATTGTTCCCTTACTATCATATTAACATCTGATAATCGTTTAGTTTCCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGTTCCCTTACTATCATATTAACATCTGATAATCGTTTAGTTTCCTA  150

seq1  AAGTCTCTCTGCATTCTTCAGTCCTACAATGAAATCATAATTATGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTCTCTGCATTCTTCAGTCCTACAATGAAATCATAATTATGAAATG  200

seq1  TAATCAAGATGCCCCTGTATTAATCATGATATCCCTGTGTTAAGCCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGATGCCCCTGTATTAATCATGATATCCCTGTGTTAAGCCTGTC  250

seq1  ATTTTTCTATCTGTCACCTAAAGCCTAGATTCTAAATATTCTGGCACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTATCTGTCACCTAAAGCCTAGATTCTAAATATTCTGGCACAGA  300

seq1  GAAACGGATCAAGAACTACCCAACCTATTTATTCAGATCCATCCATCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACGGATCAAGAACTACCCAACCTATTTATTCAGATCCATCCATCTTC  350

seq1  TTCCGGTTCTATTAGTAAACCACACCAAAACTTTTGAGCCCATCATACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCGGTTCTATTAGTAAACCACACCAAAACTTTTGAGCCCATCATACCA  400

seq1  TTTAAAGATGCCCTGGAAGAATTCTCTTGATTTATATTGTTCAATTTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGATGCCCTGGAAGAATTCTCTTGATTTATATTGTTCAATTTAAA  450

seq1  TGCGCGCGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCGCGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  498