BAC Information

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BAC

Clone NameB6Ng01-280I12
Chromosome8 (Build37)
Map Location 116,580,318 - 116,709,708
singlet/doubletdoublet
Overlap geneNudt7
Upstream geneMon1b, 4930481F22Rik, Adamts18
Downstream geneAI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-280I12.bB6Ng01-280I12.g
ACCGA080234GA080235
length1,1911,125
definitionB6Ng01-280I12.b B6Ng01-280I12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,580,318 - 116,581,503)(116,708,592 - 116,709,708)
sequence
gaattcaaacacctagaaggaaataaattatatatttcacaaactaccta
ctatgttttcttgcacaatatccatagccctcagccgaccctcctcctct
actttggctattaatagtctattttctaccaaatcatatggatgattttc
ccaaaatacataccacagcaactcagagccctgcttcagcgaccagcgga
aggacatgaagatcttcggtgctttatatactctggcctttcccatctct
ctgtctctgcttttagtaatcactgtatttgtgtatacgtagaataatga
ttcctaatatgtttaagctccttagggagacaattggtgtgcactcacag
taaatttccatgttactgtcctgggaccatgtatggacaggtgctccatg
aaacataacccaacagacataggggatcagatgctgacattttaagtgat
tcttgatatcccatgtgtattaaaagagtaacctgacttgttttagggac
tagacagagggaaagttgacaaatagacaccccttctctccctccttccc
ctcctcctctttcttcctccttcctcctctcccttctttctctctctctt
cctgttccttaccctccctcctcctctctcctcctccttcccttcctcct
acttgctcctcttcttcattcctccctcttcaccttcctattgctgatcc
tcctcccactcctcatcttccctcctcctacttgctcctcctcttttctc
ctccctcctcctctcccttcctcttctcccttcctcctccccttcctccc
acttgctccacctctttcctcctccagcctcttctcctttccttctctcc
cttcctcctttccctttctcccgatcctcctcccactccttctttcccct
tcctcctcctctctgatttccaccatagtcaccaccaggattgcctcttc
ctttcctcaggcccaactgctaggaaagggcccaagagcagaaattcttt
cctctggaagactttccttggaagactggctgtgaaaattcagtaactcc
agtttaaggataagctcagaagcactgtccaggcgtctcagactgggttc
tgtagcctgaattgctttagcctgaagccccaacttccaacctctttaac
cttctctctgccctgttgtggcagttgggttcatacctcat

gaattcattatattgatgatcaaagggtttttttgcattttattactgac
tttggttaacaattaaaaatagaaaaagaaaatcatatttttctgacagt
attgggaaggaagccaagtctagagccctagccctgatttatccttgctt
ctcaagtagtgtcccaatcctccttttcattgacagtgtgaactttttaa
ttatgttttgaacaagaatggccccaatagatccatatatttgaatgttt
agttattaaggaatggcactacttgacagggattatcaggtgtggttttg
ttggcgtaggtatggccctgttagaggaaatgtgtcactaggggtgggct
ttgggatttccagtgttcaaaccaggcccacctgtcccttctgctgcctg
tagatctggatggagaactctgagctatctctccagcaccatgtctgtct
gcaagttgacatgtttcccaacaggacagtaattggctgaacctgaaggt
ggaagccagccccagttaaatgttttccttttcaagagttgtcatagtgg
tgtctcttcacagcaatagaatatcaacagagacacttttattatagttt
gttccttccatggataaaacgaaagtaagtcaacagtagaagtgccctgt
gatgaagagcaaatgaagggcctataggagactttctcctcccaagttcc
aagtgaccagccagcaggtttattttgatgctgtggcttagatattgttg
gccttcctagctttgtccccagggtagtgtaatgagaagaggtatggaac
cattaagagattgtataagttagaacatatttagggtatcggaagatgtt
tgcctctcgttggattaagatatttctcacgggaaatcatgcttattttc
tctctaacagttctttataacaaattctgaactagccccaccttagtctt
ctctggcttcctgtgtgaagatgtgcttgtctaccactgactttctttgt
ctaccataagctgagtgagaagaggattctaccagagcctgttttcttgc
tgttcgactttcaagtttcacagttttttccaagtccgcagatttattct
ttgtatgtagcagaagagacacaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116580318_116581503
seq2: B6Ng01-280I12.b_45_1235

seq1  GAATTCAAACACCTAGAAGGAAATAAATTATATATTTCACAAACTACCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACACCTAGAAGGAAATAAATTATATATTTCACAAACTACCTA  50

seq1  CTATGTTTTCTTGCACAATATCCATAGCCCTCAGCCGACCCTCCTCCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTTTCTTGCACAATATCCATAGCCCTCAGCCGACCCTCCTCCTCT  100

seq1  ACTTTGGCTATTAATAGTCTATTTTCTACCAAATCATATGGATGATTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGCTATTAATAGTCTATTTTCTACCAAATCATATGGATGATTTTC  150

seq1  CCAAAATACATACCACAGCAACTCAGAGCCCTGCTTCAGCGACCAGCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAATACATACCACAGCAACTCAGAGCCCTGCTTCAGCGACCAGCGGA  200

seq1  AGGACATGAAGATCTTCGGTGCTTTATATACTCTGGCCTTTCCCATCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATGAAGATCTTCGGTGCTTTATATACTCTGGCCTTTCCCATCTCT  250

seq1  CTGTCTCTGCTTTTAGTAATCACTGTATTTGTGTATACGTAGAATAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTCTGCTTTTAGTAATCACTGTATTTGTGTATACGTAGAATAATGA  300

seq1  TTCCTAATATGTTTAAGCTCCTTAGGGAGACAATTGGTGTGCACTCACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTAATATGTTTAAGCTCCTTAGGGAGACAATTGGTGTGCACTCACAG  350

seq1  TAAATTTCCATGTTACTGTCCTGGGACCATGTATGGACAGGTGCTCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTCCATGTTACTGTCCTGGGACCATGTATGGACAGGTGCTCCATG  400

seq1  AAACATAACCCAACAGACATAGGGGATCAGATGCTGACATTTTAAGTGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAACCCAACAGACATAGGGGATCAGATGCTGACATTTTAAGTGAT  450

seq1  TCTTGATATCCCATGTGTATTAAAAGAGTAACCTGACTTGTTTTAGGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGATATCCCATGTGTATTAAAAGAGTAACCTGACTTGTTTTAGGGAC  500

seq1  TAGACAGAGGGAAAGTTGACAAATAGACACCCCTTCTCTCCCTCCTTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAGGGAAAGTTGACAAATAGACACCCCTTCTCTCCCTCCTTCCC  550

seq1  CTCCTCCTCTTTCTTCCTCCTTCCTCCTCTCCCTTCTTTCTCTCTCTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCTCTTTCTTCCTCCTTCCTCCTCTCCCTTCTTTCTCTCTCTCTT  600

seq1  CCTGTTCCTTACCCTCCCTCCTCCTCTCTCCTCCTCCTTCCCTTCCTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCCTTACCCTCCCTCCTCCTCTCTCCTCCTCCTTCCCTTCCTCCT  650

seq1  ACTTGCTCCTCTTCTTCATTCCTCCCTCTTCACCTTCCTATTGCTGATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCCTCTTCTTCATTCCTCCCTCTTCACCTTCCTATTGCTGATCC  700

seq1  TCCTCCCACTCCTCATCTTCCCTCCTCCTACTTGCTCCTCCTCTTTTCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCACTCCTCATCTTCCCTCCTCCTACTTGCTCCTCCTCTTTTCTC  750

seq1  CTCCCTCCTCCTCTCCCTTCCTCTTCTCCCTTCCTCCTCCCCTTCCTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCCTCCTCTCCCTTCCTCTTCTCCCTTCCTCCTCCCCTTCCTCCC  800

seq1  ACTTGCTCCACCTCTTTCCTCCTCCAGCCTCTTCTCCTTTCCTTCTCTCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGCTCCACCTCTTTCCTCCTCCAGCCTCTTCTCCTTTCCTTCTCTCC  850

seq1  CTTCCTCCTTTCCCTTTCTCCCGATCCTCCTCCCACTCC-TCCTTCCCCT  899
      ||||||||||||||||||||||||||||||||||||||| || |||||||
seq2  CTTCCTCCTTTCCCTTTCTCCCGATCCTCCTCCCACTCCTTCTTTCCCCT  900

seq1  TCCTCCTCCTCTCTGATTTCCACCATAGTCACCACCAGGATTGCCTCTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCTCTGATTTCCACCATAGTCACCACCAGGATTGCCTCTTC  950

seq1  C-TTCCTCAGGCCCAACTGCTAGGAA--GGGCCAAGAGCAGAAATTC-TT  995
      | ||||||||||||||||||||||||  || |||||||||||||||| ||
seq2  CTTTCCTCAGGCCCAACTGCTAGGAAAGGGCCCAAGAGCAGAAATTCTTT  1000

seq1  CCTCTGGAAGACTTCCCT--GGAGACTGGCTGTGAAAATCAGGTAACTCC  1043
      |||||||||||||| |||  | |||||||||||||||||   ||||||||
seq2  CCTCTGGAAGACTTTCCTTGGAAGACTGGCTGTGAAAATTCAGTAACTCC  1050

seq1  AGTTTAAGGATAAGCTCAGAAAGCACTGTCCAGGCGTTCTCAGACTGGTT  1093
      ||||||||||||||||||| |||||||||||||||| ||||||||||| |
seq2  AGTTTAAGGATAAGCTCAG-AAGCACTGTCCAGGCG-TCTCAGACTGGGT  1098

seq1  CTTGGTTAGCCTGAA-TGGTTTAAGCTGAAGCCACAACTT-CAGCCTC-T  1140
        ||  ||||||||| || ||||  |||||||| |||||| || |||| |
seq2  TCTG--TAGCCTGAATTGCTTTAGCCTGAAGCCCCAACTTCCAACCTCTT  1146

seq1  TATACTTCT-TCTGCCTCTGTTGTTGGCAGTTTGGGTTCATA-CTCAT  1186
      ||  ||||| |||||| |||||| |||||| ||||||||||| |||||
seq2  TAACCTTCTCTCTGCC-CTGTTG-TGGCAG-TTGGGTTCATACCTCAT  1191


seq1: chr8_116708592_116709708
seq2: B6Ng01-280I12.g_66_1190 (reverse)

seq1  TTTGTGTCTC-TCTGCTACATAC-AAGATTAATATCTGC-GACTTGG-AA  46
      |||||||||| |||||||||||| |||| ||| |||||| ||||||| ||
seq2  TTTGTGTCTCTTCTGCTACATACAAAGAATAA-ATCTGCGGACTTGGAAA  49

seq1  AAACTGTGAAACTTGAAAGTCCGAACAGCA--GAAACAGGCTCTTGGTAG  94
      |||||||||||||||||||| |||||||||   |||||||||| ||||||
seq2  AAACTGTGAAACTTGAAAGT-CGAACAGCAAGAAAACAGGCTC-TGGTAG  97

seq1  AATCCTCTTCTCACCTCAGCTTATGGTAGACAAAGAAAGTCAGT-GTAGA  143
      ||||||||||||| |||||||||||||||||||||||||||||| |||| 
seq2  AATCCTCTTCTCA-CTCAGCTTATGGTAGACAAAGAAAGTCAGTGGTAG-  145

seq1  ACAAGCCACATCTTCACACAGGAAGCCAGAG-AGACT-AGGTGGGGCTAG  191
      ||||| ||||||||||||||||||||||||| ||||| ||||||||||||
seq2  ACAAG-CACATCTTCACACAGGAAGCCAGAGAAGACTAAGGTGGGGCTAG  194

seq1  TTCAG-ATTTGTTAT-AAGAACTGTTAGAGAG-AAATAAGCATGATTTCC  238
      ||||| ||||||||| |||||||||||||||| |||||||||||||||||
seq2  TTCAGAATTTGTTATAAAGAACTGTTAGAGAGAAAATAAGCATGATTTCC  244

seq1  CGTGAGAAATATCTTAATCC-ACGAGAGGC-AACATCTTCCGATACCCTA  286
      |||||||||||||||||||| ||||||||| |||||||||||||||||||
seq2  CGTGAGAAATATCTTAATCCAACGAGAGGCAAACATCTTCCGATACCCTA  294

seq1  AATATGTTCTAACTTATACAATCTCTTAATGGTTCCATACCTCTTCTCAT  336
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTTCTAACTTATACAATCTCTTAATGGTTCCATACCTCTTCTCAT  344

seq1  TACACTACCCTGGGGACAAAGCTAGGAAGGCCAACAATATCTAAGCCACA  386
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACTACCCTGGGGACAAAGCTAGGAAGGCCAACAATATCTAAGCCACA  394

seq1  GCATCAAAATAAACCTGCTGGCTGGTCACTTGGAACTTGGGAGGAGAAAG  436
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAAATAAACCTGCTGGCTGGTCACTTGGAACTTGGGAGGAGAAAG  444

seq1  TCTCCTATAGGCCCTTCATTTGCTCTTCATCACAGGGCACTTCTACTGTT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTATAGGCCCTTCATTTGCTCTTCATCACAGGGCACTTCTACTGTT  494

seq1  GACTTACTTTCGTTTTATCCATGGAAGGAACAAACTATAATAAAAGTGTC  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTACTTTCGTTTTATCCATGGAAGGAACAAACTATAATAAAAGTGTC  544

seq1  TCTGTTGATATTCTATTGCTGTGAAGAGACACCACTATGACAACTCTTGA  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGATATTCTATTGCTGTGAAGAGACACCACTATGACAACTCTTGA  594

seq1  AAAGGAAAACATTTAACTGGGGCTGGCTTCCACCTTCAGGTTCAGCCAAT  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAAACATTTAACTGGGGCTGGCTTCCACCTTCAGGTTCAGCCAAT  644

seq1  TACTGTCCTGTTGGGAAACATGTCAACTTGCAGACAGACATGGTGCTGGA  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTCCTGTTGGGAAACATGTCAACTTGCAGACAGACATGGTGCTGGA  694

seq1  GAGATAGCTCAGAGTTCTCCATCCAGATCTACAGGCAGCAGAAGGGACAG  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAGCTCAGAGTTCTCCATCCAGATCTACAGGCAGCAGAAGGGACAG  744

seq1  GTGGGCCTGGTTTGAACACTGGAAATCCCAAAGCCCACCCCTAGTGACAC  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGCCTGGTTTGAACACTGGAAATCCCAAAGCCCACCCCTAGTGACAC  794

seq1  ATTTCCTCTAACAGGGCCATACCTACGCCAACAAAACCACACCTGATAAT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTCTAACAGGGCCATACCTACGCCAACAAAACCACACCTGATAAT  844

seq1  CCCTGTCAAGTAGTGCCATTCCTTAATAACTAAACATTCAAATATATGGA  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCAAGTAGTGCCATTCCTTAATAACTAAACATTCAAATATATGGA  894

seq1  TCTATTGGGGCCATTCTTGTTCAAAACATAATTAAAAAGTTCACACTGTC  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGGGGCCATTCTTGTTCAAAACATAATTAAAAAGTTCACACTGTC  944

seq1  AATGAAAAGGAGGATTGGGACACTACTTGAGAAGCAAGGATAAATCAGGG  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAGGAGGATTGGGACACTACTTGAGAAGCAAGGATAAATCAGGG  994

seq1  CTAGGGCTCTAGACTTGGCTTCCTTCCCAATACTGTCAGAAAAATATGAT  1036
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGCTCTAGACTTGGCTTCCTTCCCAATACTGTCAGAAAAATATGAT  1044

seq1  TTTCTTTTTCTATTTTTAATTGTTAACCAAAGTCAGTAATAAAATGCAAA  1086
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTTCTATTTTTAATTGTTAACCAAAGTCAGTAATAAAATGCAAA  1094

seq1  AAAACCCTTTGATCATCAATATAATGAATTC  1117
      |||||||||||||||||||||||||||||||
seq2  AAAACCCTTTGATCATCAATATAATGAATTC  1125


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