BAC Information

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BAC

Clone NameB6Ng01-282A12
Chromosome8 (Build37)
Map Location 60,113,005 - 60,251,569
singlet/doubletdoublet
Overlap geneGalnt7
Upstream geneEG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, LOC100040634
Downstream geneLOC100040711, 4930431L04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282A12.bB6Ng01-282A12.g
ACCGA081354GA081355
length5121,081
definitionB6Ng01-282A12.b B6Ng01-282A12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(60,113,005 - 60,113,522)(60,250,486 - 60,251,569)
sequence
aggcacatcatttctcctacttaaacacaaatccctgcatcgataagatg
ttagaataaaacactgagaatctaaacatgtctagcagatggtattgtta
agaaattaaagatacgccagtagtacttgatactgctgggtcttcaagct
agagtctggctccatccttgaatggaagtgatgacaccaacctgtggtag
agcaatggacagaaagcgtgctgagtattggttttaaaatggaaagagcc
agtgagagagcctggttgtaaagagttgtttaacaggcacaagacctgtt
caatccctaatatcatagctagataaagacatagatagatagatagatag
atagatagatagatagatagatagatagatagatagatgatagatagata
gatagatagatagatagatagataagattttgaagacagagccgtgtagc
atggcactagttttgtttctaaatactcacactgtagagaataatggttc
ataatatcccag

gaattctctgctattcacatctgctccatgtaacaaacggaagtaactga
cgcagtacagaaaggctggttagatttccaaatcctattgctaatgactt
tacccgcacatcattcaccttgggatgaaagccaatcataaccaagaagc
atatattctggattttcagggacagtcatggtttatgtctacttactatg
taactattcatagtgtcttcctttgctcttaaaaaatgacctgaattatg
taacacattgaatagtcaacttatttataatctactcaggctgtgtatga
ttcctctgtgggaattgctaaagaagtcttttgcttcttcatgtctgcaa
gaaatccgctagccttccttccctcccagtgggaccagaatatagtcatt
ctactgacgactttccatcgagtttacatgagagttgacaggtttttaaa
tgaagggttatctcccagatttcgtttatctacctacccccccaaaaaaa
gaagttgcagaattaataaaacaataatgtaaatggatttttaaatagtt
taaattttctattgaaatgtgagactaagacatctcagacttctctgagt
acagacagtggatagccagcatagataaaggctgcttgtctaatcctaat
atgttgacattacaggataaacatggtttcattattgcttctgctttgca
gaaccatcttatatttattatgacattctgcccaatatattgactcttgc
aatagatgacattaactgtccttctgaagaaactgcaagactccgaagaa
aaaattttgcagtcctttggcaaatcagcagagttgagatgagaacccag
gccttcggtactcagtactccgtatcagtcaccctcctgggtacctcata
tgtcccagcaatgctcagttacttcacagtagtgcgatcccttatgcctc
tgggacttggggctttaacccctctattgtgttttttttctttgtacctc
tgtgtttttattggttttcctacaagcttataaagtagaacaccccaatg
gaaatccagatattcctcttattgagatttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60113005_60113522
seq2: B6Ng01-282A12.b_44_561

seq1  GAATTCAGGCACATCATTTCTCCTACTTAAACACAAATCCCTGCATCGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCACATCATTTCTCCTACTTAAACACAAATCCCTGCATCGAT  50

seq1  AAGATGTTAGAATAAAACACTGAGAATCTAAACATGTCTAGCAGATGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGTTAGAATAAAACACTGAGAATCTAAACATGTCTAGCAGATGGTA  100

seq1  TTGTTAAGAAATTAAAGATACGCCAGTAGTACTTGATACTGCTGGGTCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTAAGAAATTAAAGATACGCCAGTAGTACTTGATACTGCTGGGTCTT  150

seq1  CAAGCTAGAGTCTGGCTCCATCCTTGAATGGAAGTGATGACACCAACCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGAGTCTGGCTCCATCCTTGAATGGAAGTGATGACACCAACCTG  200

seq1  TGGTAGAGCAATGGACAGAAAGCGTGCTGAGTATTGGTTTTAAAATGGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAGCAATGGACAGAAAGCGTGCTGAGTATTGGTTTTAAAATGGAA  250

seq1  AGAGCCAGTGAGAGAGCCTGGTTGTAAAGAGTTGTTTAACAGGCACAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCAGTGAGAGAGCCTGGTTGTAAAGAGTTGTTTAACAGGCACAAGA  300

seq1  CCTGTTCAATCCCTAATATCATAGCTAGATAAAGACATAGATAGATAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTCAATCCCTAATATCATAGCTAGATAAAGACATAGATAGATAGAT  350

seq1  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAGATAGATAGATAGATAGATAGATAGATAGATAGATGATAGA  400

seq1  TAGATAGATAGATAGATAGATAGATAGATAAGATTTTGAAGACAGAGCCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATAGATAGATAGATAGATAGATAGATAAGATTTTGAAGACAGAGCCG  450

seq1  TGTAGCATGGCACTAGTTTTGTTTCTAAATACTCACACTGTAGAGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTAGCATGGCACTAGTTTTGTTTCTAAATACTCACACTGTAGAGAATAA  500

seq1  TGGTTCATAAAATCCCAG  518
      |||||||||| |||||||
seq2  TGGTTCATAATATCCCAG  518


seq1: chr8_60250486_60251569
seq2: B6Ng01-282A12.g_69_1149 (reverse)

seq1  GAAATCTCATTAAGAGGGATTAATCCTGGA-TTCCATTTGGGTGTTCTTA  49
      ||||||||| ||||||| ||  || ||||| ||||||| |||||||| ||
seq2  GAAATCTCAATAAGAGGAAT--AT-CTGGATTTCCATTGGGGTGTTC-TA  46

seq1  CTTTAATAAGCTTGTAGGAAAACCAATAAAAACACAGAGGTACAAAG-AA  98
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTTT-ATAAGCTTGTAGGAAAACCAATAAAAACACAGAGGTACAAAGAAA  95

seq1  AAAAACACAATAGAGGGGTTAAAGCCCCAAGTCCCAGAGGCATAAGGGAT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACAATAGAGGGGTTAAAGCCCCAAGTCCCAGAGGCATAAGGGAT  145

seq1  CGCACTACTGTGAAGTAACTGAGCATTGCTGGGACATATGAGGTACCCAG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCACTACTGTGAAGTAACTGAGCATTGCTGGGACATATGAGGTACCCAG  195

seq1  GAGGGTGACTGATACGGAGTACTGAGTACCGAAGGCCTGGGTTCTCATCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTGACTGATACGGAGTACTGAGTACCGAAGGCCTGGGTTCTCATCT  245

seq1  CAACTCTGCTGATTTGCCAAAGGACTGCAAAATTTTTTCTTCGGAGTCTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTCTGCTGATTTGCCAAAGGACTGCAAAATTTTTTCTTCGGAGTCTT  295

seq1  GCAGTTTCTTCAGAAGGACAGTTAATGTCATCTATTGCAAGAGTCAATAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTTCTTCAGAAGGACAGTTAATGTCATCTATTGCAAGAGTCAATAT  345

seq1  ATTGGGCAGAATGTCATAATAAATATAAGATGGTTCTGCAAAGCAGAAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGCAGAATGTCATAATAAATATAAGATGGTTCTGCAAAGCAGAAGC  395

seq1  AATAATGAAACCATGTTTATCCTGTAATGTCAACATATTAGGATTAGACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGAAACCATGTTTATCCTGTAATGTCAACATATTAGGATTAGACA  445

seq1  AGCAGCCTTTATCTATGCTGGCTATCCACTGTCTGTACTCAGAGAAGTCT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGCCTTTATCTATGCTGGCTATCCACTGTCTGTACTCAGAGAAGTCT  495

seq1  GAGATGTCTTAGTCTCACATTTCAATAGAAAATTTAAACTATTTAAAAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTCTTAGTCTCACATTTCAATAGAAAATTTAAACTATTTAAAAAT  545

seq1  CCATTTACATTATTGTTTTATTAATTCTGCAACTTCTTTTTTTGGGGGGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTACATTATTGTTTTATTAATTCTGCAACTTCTTTTTTTGGGGGGG  595

seq1  TAGGTAGATAAACGAAATCTGGGAGATAACCCTTCATTTAAAAACCTGTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAGATAAACGAAATCTGGGAGATAACCCTTCATTTAAAAACCTGTC  645

seq1  AACTCTCATGTAAACTCGATGGAAAGTCGTCAGTAGAATGACTATATTCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCATGTAAACTCGATGGAAAGTCGTCAGTAGAATGACTATATTCT  695

seq1  GGTCCCACTGGGAGGGAAGGAAGGCTAGCGGATTTCTTGCAGACATGAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCCACTGGGAGGGAAGGAAGGCTAGCGGATTTCTTGCAGACATGAAG  745

seq1  AAGCAAAAGACTTCTTTAGCAATTCCCACAGAGGAATCATACACAGCCTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAAAGACTTCTTTAGCAATTCCCACAGAGGAATCATACACAGCCTG  795

seq1  AGTAGATTATAAATAAGTTGACTATTCAATGTGTTACATAATTCAGGTCA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGATTATAAATAAGTTGACTATTCAATGTGTTACATAATTCAGGTCA  845

seq1  TTTTTTAAGAGCAAAGGAAGACACTATGAATAGTTACATAGTAAGTAGAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAAGAGCAAAGGAAGACACTATGAATAGTTACATAGTAAGTAGAC  895

seq1  ATAAACCATGACTGTCCCTGAAAATCCAGAATATATGCTTCTTGGTTATG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACCATGACTGTCCCTGAAAATCCAGAATATATGCTTCTTGGTTATG  945

seq1  ATTGGCTTTCATCCCAAGGTGAATGATGTGCGGGTAAAGTCATTAGCAAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGCTTTCATCCCAAGGTGAATGATGTGCGGGTAAAGTCATTAGCAAT  995

seq1  AGGATTTGGAAATCTAACCAGCCTTTCTGTACTGCGTCAGTTACTTCCGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTTGGAAATCTAACCAGCCTTTCTGTACTGCGTCAGTTACTTCCGT  1045

seq1  TTGTTACATGGAGCAGATGTGAATAGCAGAGAATTC  1084
      ||||||||||||||||||||||||||||||||||||
seq2  TTGTTACATGGAGCAGATGTGAATAGCAGAGAATTC  1081


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