BAC Information

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BAC

Clone NameB6Ng01-282D02
Chromosome8 (Build37)
Map Location 46,381,660 - 46,382,787
singlet/doubletsinglet
Overlap geneKlkb1
Upstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11
Downstream geneCyp4v3, BC035537, Tlr3, Sorbs2, Pdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282D02.bB6Ng01-282D02.g
ACCGA081474GA081475
length1,1391,163
definitionB6Ng01-282D02.b B6Ng01-282D02.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccccatatatcagtatagtatatcaacttgctcttggcatggaat
gtagcctgtagtaaagatttctatctcagtgagattcccaggctctttct
gcagacaactgagttaatggctctgtctattgtaatgcttaattagttac
tgaataggttaaactaccttgctgtaaactgggatcttggaacactggga
gaggctttagctatgtcagaattcaatcttaaatggcacttataataggg
taatgcttaatagagggcacgtggatccatacactagactaacatgggag
tggaaaattaatgtatgggttaaagagattaaagagagtgccagactcca
ggagggagcttccatgaaactcttttcctcacggccagcttccaagcttc
tgcttgtcaaactgactcgactggagagcgtggcaaggggtgaataaata
aactttaaaaaattaaatttaaaataacttctcatctaaaggtgcaaacc
ccaaaacaaaacacacacacacacacacacacacacacacacacacacac
acacacaaaacaaagccccaccccccccaaatcaccaaaagaaaaaagtt
aggaacttatatgtgatcttaaataaatgaaggtagaagaattggaagaa
aactttgaggacctacaaaccaaaagaactccttaaagatggtgaataag
atggttatccagataaagaggtggaaagaccgtctcatcaacgcacattg
cattcagaaacagcaggagaaaaaatgcagctgttcacatacaagagaag
tgcataagactattaacagttcttagcagaagttttgcaatccaggatgg
tacaattggtttaaagtgtagatggttttttcagttgtaacagtttgaaa
atgacttatgcatgcattataataaccataaagaaacttgaaatacacat
aaaatatgaagaaaaaaaagaatccatccataaaataatgattataataa
aagtaacccgatgctttgtttacccatgaaatgttaaatacatagacttt
ctcaatcaaaggccatagagttacttggctggctgaacttcttctacacc
agccttgttctttgccacacgatcacccgttttggtaca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaaatgaagactgaagtgtggacactatgcccctccttagaagtgggaa
caaaacacccatggaaggagttacagaaacaaagtatggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcttccaaatgctgacaccattgcatacactagcaagattttactgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatgggatcacagggctccc
aatggaggagctagagaaagtaccccaggagctaaaggaatcttcaacct
atagtgacacattatgaactaaccagtacccctgagctctgactctagct
gcatatgtatcaaagatgactagttcgcatcactggaagagagcccaatt
ggacacgctgacttgtgccagttacaggacgtcaaggcctaatgggtagt
aagttggaatagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46381660_46382787
seq2: B6Ng01-282D02.b_44_1182

seq1  GAATTCCCCATATATCAGTATAGTATATCAACTTGCTCTTGGCATGGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCATATATCAGTATAGTATATCAACTTGCTCTTGGCATGGAAT  50

seq1  GTAGCCTGTAGTAAAGATTTCTATCTCAGTGAGATTCCCAGGCTCTTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTGTAGTAAAGATTTCTATCTCAGTGAGATTCCCAGGCTCTTTCT  100

seq1  GCAGACAACTGAGTTAATGGCTCTGTCTATTGTAATGCTTAATTAGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAACTGAGTTAATGGCTCTGTCTATTGTAATGCTTAATTAGTTAC  150

seq1  TGAATAGGTTAAACTACCTTGCTGTAAACTGGGATCTTGGAACACTGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGGTTAAACTACCTTGCTGTAAACTGGGATCTTGGAACACTGGGA  200

seq1  GAGGCTTTAGCTATGTCAGAATTCAATCTTAAATGGCACTTATAATAGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTAGCTATGTCAGAATTCAATCTTAAATGGCACTTATAATAGGG  250

seq1  TAATGCTTAATAGAGGGCACGTGGATCCATACACTAGACTAACATGGGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGCTTAATAGAGGGCACGTGGATCCATACACTAGACTAACATGGGAG  300

seq1  TGGAAAATTAATGTATGGGTTAAAGAGATTAAAGAGAGTGCCAGACTCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAATTAATGTATGGGTTAAAGAGATTAAAGAGAGTGCCAGACTCCA  350

seq1  GGAGGGAGCTTCCATGAAACTCTTTTCCTCACGGCCAGCTTCCAAGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAGCTTCCATGAAACTCTTTTCCTCACGGCCAGCTTCCAAGCTTC  400

seq1  TGCTTGTCAAACTGACTCGACTGGAGAGCGTGGCAAGGGGTGAATAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGTCAAACTGACTCGACTGGAGAGCGTGGCAAGGGGTGAATAAATA  450

seq1  AACTTTAAAAAATTAAATTTAAAATAACTTCTCATCTAAAGGTGCAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAAAAAATTAAATTTAAAATAACTTCTCATCTAAAGGTGCAAACC  500

seq1  CCAAAACAAAACACACACACACACACACACACACACACACACACACACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACAAAACACACACACACACACACACACACACACACACACACACAC  550

seq1  ACACACAAAACAAAGCCCCACCCCCCCCAAATCACCAAAAGAAAAAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAAACAAAGCCCCACCCCCCCCAAATCACCAAAAGAAAAAAGTT  600

seq1  AGGAACTTATATGTGATCTTAAATAAATGAAGGTAGAAGAATTGGAAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACTTATATGTGATCTTAAATAAATGAAGGTAGAAGAATTGGAAGAA  650

seq1  AACTTTGAGGACCTACAAACCAAAAGAACTCCTTAAAGATGGTGAATAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGAGGACCTACAAACCAAAAGAACTCCTTAAAGATGGTGAATAAG  700

seq1  ATGGTTATCCAGATAAAGAGGTGGAAAGACCGTCTCATCAACGCACATTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTATCCAGATAAAGAGGTGGAAAGACCGTCTCATCAACGCACATTG  750

seq1  CATTCAGAAACAGCAGGAGAAAAAATGCAGCTGTTCACATACAAGAGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAGAAACAGCAGGAGAAAAAATGCAGCTGTTCACATACAAGAGAAG  800

seq1  TGCATAAGACTATTAACAGTTCTTAGCAGAAGTTTTGCAATCCAGGATGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAGACTATTAACAGTTCTTAGCAGAAGTTTTGCAATCCAGGATGG  850

seq1  TACAATTGGTTTAAAGTGTAGATGG-TTTTTCAGTTGTAACAGTT--GAA  897
      ||||||||||||||||||||||||| |||||||||||||||||||   ||
seq2  TACAATTGGTTTAAAGTGTAGATGGTTTTTTCAGTTGTAACAGTTTGAAA  900

seq1  ATGACTTATGCATGCATTATAATAACCATAAAGAAACTTGAAATACACAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTTATGCATGCATTATAATAACCATAAAGAAACTTGAAATACACAT  950

seq1  AAAATATGAAG-AAAAAAAGAATCCATCCATAAAATAATGATTATAAT-A  995
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  AAAATATGAAGAAAAAAAAGAATCCATCCATAAAATAATGATTATAATAA  1000

seq1  AAGTAA-CCGATGCTTTGTT--ACCATGAAATGTT-AATACATAGAATTT  1041
      |||||| |||||||||||||   |||||||||||| |||||||||| |||
seq2  AAGTAACCCGATGCTTTGTTTACCCATGAAATGTTAAATACATAGACTTT  1050

seq1  CTCAATCAAAAGCCATAGAGTGGC-TGGCTGGCTGAACTCCTTCCTACAC  1090
      |||||||||| ||||||||||  | |||||||||||||| ||| ||||||
seq2  CTCAATCAAAGGCCATAGAGTTACTTGGCTGGCTGAACTTCTT-CTACAC  1099

seq1  CAG-CTTGTTCTTTGCCACACGAATCACCC--TTTTGTACA  1128
      ||| |||||||||||||||||| |||||||  ||| |||||
seq2  CAGCCTTGTTCTTTGCCACACG-ATCACCCGTTTTGGTACA  1139