BAC Information

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BAC

Clone NameB6Ng01-282F18
Chromosome8 (Build37)
Map Location 76,855,043 - 76,856,192
singlet/doubletsinglet
Overlap genenone
Upstream geneLarge, LOC100039001, LOC666134, Crry-ps, LOC666146
Downstream geneIsx, Hmgb2l1, Tom1, LOC100039134, Hmox1, Mcm5, Rasd2, LOC675507
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282F18.bB6Ng01-282F18.g
ACCGA081600GA081601
length1,152118
definitionB6Ng01-282F18.b B6Ng01-282F18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttagttctcagaagagtggcacctactacctgggtagtcttgca
ctctgaagcacttggagccattgtggcatatatcaatggcctagaaaggg
agctcgtggaattctcacttctcttaaggattttagcttttacacattaa
aattatcatctttaatcttgcttttataattctgaggatggcaaatatct
cattcaagggaagataaatcttctggtctgaaagattgtctttcccacca
tcctacatattgaattgtctacaaaatattattcatttaataggattaaa
gaaataagaatcactagaaattaagatacataaaaatacacagatgattt
aagagtgttcttaagaagacaggcaagatcatgaatgaactcaaaggatg
tataactttaactagaatggatatatagacagtagaaataaagtagaggc
atttagattatagatgtatctaacattttacataatttatccataaataa
ataaataaataaataagtgaataaaaatcacagaggaactgtgaagaaac
ataggagaagagatatacctatatactatacctataaactatgtatattt
atcatgataagagaaagagaaagaaataggtagtcagacttaagcgttct
aaattcttcacactttcaggagggcaataacactaaatttagaatactaa
gtatggctcttggtttagtaacttcaagatagatagtgctagtctaatga
atagtaggtggaaataatacactatttcaaatagttcattgagcatacaa
agcacatgtgaaggtcacagacatgaagatcagtgagtatgtagagggaa
agagggaaactcatggaccagcattttgattgagtccctcaaggtttccc
acatagagttttacttggtagattgaaagtaaacagtcatgagtttcaag
aaagtcaatgagaggcagtcattacaacacagttacacgggttcacatag
catctagaaatcagtaggccatttcaagtagagtggtgacagctatagaa
agcagtatgtgcattgtcatatagaggccccagagggattttataactgt
gcaaaaagtgaatggaagctctcctctggccatgtaaaggtaccacttat
ac

catccaagaaatgagaacagcccatgtccataaagtgatgaagagataaa
gatatgatatatactcataatggaacacaagtcagctagggagagaggga
gagggagagggagaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_76855043_76856192
seq2: B6Ng01-282F18.b_48_1199 (reverse)

seq1  GTATAAGTTGTACTTTTACAT-GCCAGAGGGAGAGCTTC--ATCACTTTT  47
      |||||||| |||| ||||||| |||||| ||||||||||   |||| |||
seq2  GTATAAGTGGTACCTTTACATGGCCAGA-GGAGAGCTTCCATTCAC-TTT  48

seq1  TTGCACAATTTATAAAATCCCTCT-GGGCCTCTATATGGACAATGCACAT  96
      |||||| | ||||||||||||||| |||||||||||| ||||||||||||
seq2  TTGCAC-AGTTATAAAATCCCTCTGGGGCCTCTATAT-GACAATGCACAT  96

seq1  AACTGCTTTCTATAGCTGGTCA-CACTCTACTTG-AATGGCCTACTGATT  144
       |||||||||||||||| |||| ||||||||||| |||||||||||||||
seq2  -ACTGCTTTCTATAGCT-GTCACCACTCTACTTGAAATGGCCTACTGATT  144

seq1  TCTAGATGCTATGTGAA-CCGTGTAACTGTGTTGTAATGACTGCCTCTCA  193
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTAGATGCTATGTGAACCCGTGTAACTGTGTTGTAATGACTGCCTCTCA  194

seq1  TTGAC-TTCTTGAAACTCATGACTGTTTACTTTCAATCTACCAAGTAAAA  242
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTTCTTGAAACTCATGACTGTTTACTTTCAATCTACCAAGTAAAA  244

seq1  CTCTATGTGGGAAACCTTGAGGGACTCAATCAAAATGCTGGTCCATGAGT  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTGGGAAACCTTGAGGGACTCAATCAAAATGCTGGTCCATGAGT  294

seq1  TTCCCTCTTTCCCTCTACATACTCACTGATCTTCATGTCTGTGACCTTCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCTTTCCCTCTACATACTCACTGATCTTCATGTCTGTGACCTTCA  344

seq1  CATGTGCTTTGTATGCTCAATGAACTATTTGAAATAGTGTATTATTTCCA  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCTTTGTATGCTCAATGAACTATTTGAAATAGTGTATTATTTCCA  394

seq1  CCTACTATTCATTAGACTAGCACTATCTATCTTGAAGTTACTAAACCAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTATTCATTAGACTAGCACTATCTATCTTGAAGTTACTAAACCAAG  444

seq1  AGCCATACTTAGTATTCTAAATTTAGTGTTATTGCCCTCCTGAAAGTGTG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATACTTAGTATTCTAAATTTAGTGTTATTGCCCTCCTGAAAGTGTG  494

seq1  AAGAATTTAGAACGCTTAAGTCTGACTACCTATTTCTTTCTCTTTCTCTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTAGAACGCTTAAGTCTGACTACCTATTTCTTTCTCTTTCTCTT  544

seq1  ATCATGATAAATATACATAGTTTATAGGTATAGTATATAGGTATATCTCT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGATAAATATACATAGTTTATAGGTATAGTATATAGGTATATCTCT  594

seq1  TCTCCTATGTTTCTTCACAGTTCCTCTGTGATTTTTATTCACTTATTTAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTATGTTTCTTCACAGTTCCTCTGTGATTTTTATTCACTTATTTAT  644

seq1  TTATTTATTTATTTATGGATAAATTATGTAAAATGTTAGATACATCTATA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTATTTATGGATAAATTATGTAAAATGTTAGATACATCTATA  694

seq1  ATCTAAATGCCTCTACTTTATTTCTACTGTCTATATATCCATTCTAGTTA  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAATGCCTCTACTTTATTTCTACTGTCTATATATCCATTCTAGTTA  744

seq1  AAGTTATACATCCTTTGAGTTCATTCATGATCTTGCCTGTCTTCTTAAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATACATCCTTTGAGTTCATTCATGATCTTGCCTGTCTTCTTAAGA  794

seq1  ACACTCTTAAATCATCTGTGTATTTTTATGTATCTTAATTTCTAGTGATT  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTAAATCATCTGTGTATTTTTATGTATCTTAATTTCTAGTGATT  844

seq1  CTTATTTCTTTAATCCTATTAAATGAATAATATTTTGTAGACAATTCAAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTCTTTAATCCTATTAAATGAATAATATTTTGTAGACAATTCAAT  894

seq1  ATGTAGGATGGTGGGAAAGACAATCTTTCAGACCAGAAGATTTATCTTCC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGGATGGTGGGAAAGACAATCTTTCAGACCAGAAGATTTATCTTCC  944

seq1  CTTGAATGAGATATTTGCCATCCTCAGAATTATAAAAGCAAGATTAAAGA  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGAGATATTTGCCATCCTCAGAATTATAAAAGCAAGATTAAAGA  994

seq1  TGATAATTTTAATGTGTAAAAGCTAAAATCCTTAAGAGAAGTGAGAATTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAATTTTAATGTGTAAAAGCTAAAATCCTTAAGAGAAGTGAGAATTC  1044

seq1  CACGAGCTCCCTTTCTAGGCCATTGATATATGCCACAATGGCTCCAAGTG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGAGCTCCCTTTCTAGGCCATTGATATATGCCACAATGGCTCCAAGTG  1094

seq1  CTTCAGAGTGCAAGACTACCCAGGTAGTAGGTGCCACTCTTCTGAGAACT  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAGTGCAAGACTACCCAGGTAGTAGGTGCCACTCTTCTGAGAACT  1144

seq1  AAGAATTC  1150
      ||||||||
seq2  AAGAATTC  1152


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