BAC Information

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BAC

Clone NameB6Ng01-282H14
Chromosome8 (Build37)
Map Location 53,192,865 - 53,194,021
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667517, LOC623872
Downstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282H14.bB6Ng01-282H14.g
ACCGA081682GA081683
length1,1751,152
definitionB6Ng01-282H14.b B6Ng01-282H14.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgcttagctctgagccccatttttaatggagttatttgattt
tctagagaccaccttcttgagttatatatattggatattaatcctctctc
tgttttaggataggtaaatatcctttcccaacctgttggtggcctttttg
tcttattgacagtgtcttttgccttacagaagcattgcagttttatgagg
tcccatttgtcaattctcaatcttacagtgcaagccattgctgttctatt
caggaatttttcctctgtccccatatcttcgaggcttttccccactttct
cctctataagtttcagtgtctctggttttatgtggagttccttgatccac
ttagatttgaccttagtacaaggaaaaaggaaatgttcaattcccattct
tctacatgataaccaccagttgtgccagcaccatttgttaaaaatgctgt
cttttttccaatggatggtttttgctcccttgtcaaagattaagttacca
taggtgtgtgggttcatttctgggacttcagttctataccatgggtctac
ttgtctgtcgctataccagtaacatggagtttttatcgcaattgctctgt
agtacagctttaggtcagacatggtgattccaccagaggttcttttatcc
ttgagaagagtttttgctatcctatgtttttttgttattccagatgaatt
tgcaaatagctctttctaattcgttgaagaattgagttggaattttgatg
gggattgatttgaatctgtagattgcttttggcaagatagccatttttac
tgtattgatcctgccaatacatgagcatggaagatctttccatcttctga
gatcttctttagtttctttcttcagagacttaaaagttgttatcatacag
acctttcactcccttagagtcatgccaaggtattttatattatttgtgac
tattgagaaagggtgttgttttccctaatttctatctcagttctgtttat
ttctttgttagagaagggcctttgacttgttgtgttaatttatatcgtct
actcatcggagctgttatcagttagagtctctgtggaattttagagtcac
ttaatatatactatcaatcatctgccaaaagtgaatattttgaacttcct
ttccgttttcaaagttgtggtatac

gaattccatctgagaactctggaagaattaacttaaaatatcaatgtata
attatgaaaaactgaaagttgagtaaatagtggatgaaaatttttgggtt
tgtattagagaacaaaagtaactttgtggatgaacagagactttaagctt
tgacaaagtggagttaagaagctagaatttgaagtatttgagaaatgtga
tttgaacctagtgtggtgatttatgcctctaaatagagcacttctatagc
tgaggcaggaggatgcttatgaatttgaaatcagtcaggaatatattgtg
aatttcagtacagtgtgaaggtcaacttgagactctacataaaacgtaaa
taaatatataaaaattttaaagatataaaatactgtgtatatatatatat
atatatatatatataataaactatatatatttgaattcaatatgtacatt
gaattcaatatacatattgaattcaactaagaacattagaacttactaga
gctccctggactttgaagtaataatacttttctctatgatgggggaaaaa
aatcagagttcctagatttgatgtaatgtttcttgacagtctctagggat
gtagtagatctgggagaaggcctatctatcataaagtcattgttcttcca
agatactttgaagggaagaaagtaatgagttctcaagatataccccgaaa
tatatgaaactgtggggattaaaaccttacttctttgctttcacagatca
ttttattccctttttccttctatattgcatcctttatcctctgcatcaaa
taaagaatgttcattttttttcaaggttaaaattcttttagggttcttta
ttatttcctgtaccacttaatttggtgctttagtttcaatataaaatgtt
ttagccctatttgctaagtctatgtagtgatcacttttgtcccaatctct
tacttagttcctgtattaaataatgttgtaaaattgtttttaaaataggt
aatattttcaatgaaactttctatgaaagtcatattctgagttacaaata
cccaaaatgtattaatgctgtgctctaataattcacctgaatgtcttcat
tcgagtggctattagaattccatatcactagaacattactgagtatttga
aa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53192865_53194021
seq2: B6Ng01-282H14.g_64_1215

seq1  GAATTCCATCTGAGAACTCTGGAAGAATTAACTTAAAATATCAATGTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTGAGAACTCTGGAAGAATTAACTTAAAATATCAATGTATA  50

seq1  ATTATGAAAAACTGAAAGTTGAGTAAATAGTGGATGAAAATTTTTGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGAAAAACTGAAAGTTGAGTAAATAGTGGATGAAAATTTTTGGGTT  100

seq1  TGTATTAGAGAACAAAAGTAACTTTGTGGATGAACAGAGACTTTAAGCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGAGAACAAAAGTAACTTTGTGGATGAACAGAGACTTTAAGCTT  150

seq1  TGACAAAGTGGAGTTAAGAAGCTAGAATTTGAAGTATTTGAGAAATGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGTGGAGTTAAGAAGCTAGAATTTGAAGTATTTGAGAAATGTGA  200

seq1  TTTGAACCTAGTGTGGTGATTTATGCCTCTAAATAGAGCACTTCTATAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACCTAGTGTGGTGATTTATGCCTCTAAATAGAGCACTTCTATAGC  250

seq1  TGAGGCAGGAGGATGCTTATGAATTTGAAATCAGTCAGGAATATATTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCAGGAGGATGCTTATGAATTTGAAATCAGTCAGGAATATATTGTG  300

seq1  AATTTCAGTACAGTGTGAAGGTCAACTTGAGACTCTACATAAAACGTAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCAGTACAGTGTGAAGGTCAACTTGAGACTCTACATAAAACGTAAA  350

seq1  TAAATATATAAAAATTTTAAAGATATAAAATACTGTGTATATATATATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATATAAAAATTTTAAAGATATAAAATACTGTGTATATATATATAT  400

seq1  ATATATATATATATAATAAACTATATATATTTGAATTCAATATGTACATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATAATAAACTATATATATTTGAATTCAATATGTACATT  450

seq1  GAATTCAATATACATATTGAATTCAACTAAGAACATTAGAACTTACTAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATACATATTGAATTCAACTAAGAACATTAGAACTTACTAGA  500

seq1  GCTCCCTGGACTTTGAAGTAATAATACTTTTCTCTATGATGGGGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTGGACTTTGAAGTAATAATACTTTTCTCTATGATGGGGGAAAAA  550

seq1  AATCAGAGTTCCTAGATTTGATGTAATGTTTCTTGACAGTCTCTAGGGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGTTCCTAGATTTGATGTAATGTTTCTTGACAGTCTCTAGGGAT  600

seq1  GTAGTAGATCTGGGAGAAGGCCTATCTATCATAAAGTCATTGTTCTTCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAGATCTGGGAGAAGGCCTATCTATCATAAAGTCATTGTTCTTCCA  650

seq1  AGATACTTTGAAGGGAAGAAAGTAATGAGTTCTCAAGATATACCCCGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTTTGAAGGGAAGAAAGTAATGAGTTCTCAAGATATACCCCGAAA  700

seq1  TATATGAAACTGTGGGGATTAAAACCTTACTTCTTTGCTTTCACAGATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGAAACTGTGGGGATTAAAACCTTACTTCTTTGCTTTCACAGATCA  750

seq1  TTTTATTCCCTTTTTCCTTCTATATTGCATCCTTTATCCTCTGCATCAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTCCCTTTTTCCTTCTATATTGCATCCTTTATCCTCTGCATCAAA  800

seq1  TAAAGAATGTTCA-TTTTTTTCAAGGTTAAAATTCTTTTAGGGTTCTTTA  849
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATGTTCATTTTTTTTCAAGGTTAAAATTCTTTTAGGGTTCTTTA  850

seq1  TTATTTCCTGTACCACTTAATTTGGTGCTTTAGTTTCAATATAAAATGTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCTGTACCACTTAATTTGGTGCTTTAGTTTCAATATAAAATGTT  900

seq1  TTAG-CCTATTTGCTAAGTCTATGTAGTGATCACTTTTGTCCCAATCTCT  948
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCCCTATTTGCTAAGTCTATGTAGTGATCACTTTTGTCCCAATCTCT  950

seq1  TACTTAGTTCCTGTATTAAATAATGTTTGTAAAATTGTTTTTAAAATAGG  998
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TACTTAGTTCCTGTATTAAATAATG-TTGTAAAATTGTTTTTAAAATAGG  999

seq1  TAATATTTTCAATGAAAACTTTCTATGAAAGTCAATATTCTGAGTTTACA  1048
      |||||||||||||| |||||||||||||||||| |||||||||| |||| 
seq2  TAATATTTTCAATG-AAACTTTCTATGAAAGTC-ATATTCTGAG-TTAC-  1045

seq1  AAATACCAAAAATGTAATTAATGCTGTGCTCTAAATAATTCACTTG-ATG  1097
      ||||||| ||||||| |||||||||||||||| |||||||||| || |||
seq2  AAATACCCAAAATGT-ATTAATGCTGTGCTCT-AATAATTCACCTGAATG  1093

seq1  TCTTCA-TCAAGT-GCTATTAGATTTCCCATTAATCACTAGAACA-TAAT  1144
      |||||| || ||| ||||||||| || ||||  |||||||||||| || |
seq2  TCTTCATTCGAGTGGCTATTAGAATT-CCAT--ATCACTAGAACATTACT  1140

seq1  GAGGTATTTGAAA  1157
      || ||||||||||
seq2  GA-GTATTTGAAA  1152


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