BAC Information

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BAC

Clone NameB6Ng01-282M22
Chromosome8 (Build37)
Map Location 121,112,674 - 121,112,942
singlet/doubletsinglet
Overlap geneCdh13
Upstream genePlcg2, 4632417N05Rik, Hsd17b2, Mphosph6
Downstream geneHsbp1, Mlycd, Osgin1, Efcbp2, Gm587, Mbtps1, Hsdl1, Lrrc50
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-282M22.bB6Ng01-282M22.g
ACCGA081926GA081927
length1,189636
definitionB6Ng01-282M22.b B6Ng01-282M22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccatttttaatggggttgtttgattt
tctggagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaatttggagtttcatt
aggtcccatttgtcaattctcgatcttacagcacatgccattgctgttct
gttcaggaatttttcccctgtgcccatatcttcaaggcttttccccacat
tctcctctataagtttcagtgtctctggttttatgtgaaattccttgatc
cacttagatttgaccatagtacaaggagacaagtatggatcgattcacat
tcttttacatgataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactggatgattttagctcccttgtcgaagatcaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtttctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttta
tccttgagaagactttttgctatcctaggtttcttgttattccagatgaa
tttgcaaattgctccttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggcaagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagatttgaagtttttatcataca
gatctttcacttcctttagttagagtcacgccaagatatttatcctattt
gtgactattgagaagggtgttgttcctaatttctttctcagcctgtttat
tctttgtatagaagaaggccattgacttgtttgagtttattttatatcca
gctaccttcaccgaagctggttttatctggttttagggagttcctctggg
ttgaacttttaggttcactttatatatatcctatcatatcatctgcagag
ggaatatttggactcctctctttttcccacatttggtgt

gaattcagtttatgagtattttattgagtatttttccatcaatatttata
agttaaaatgatttgaagttctctttctttgttgtgtctttgtgtggttt
agatatcaatgtaactgaggctttttatgatgaattgaggagtatttctt
ctgtttcaatttgtgaaatattttaaggagtattggtaataggtcttctt
tggaggtctgacagaattcctcattaaaacaatctggccctgggattttt
tgtttagtagagttttttttgtttgtttgtttgttttgttttgttttgtt
ttgttctttgttttttgttctttgttttgtaatttaatatgattatgtga
gaagaaggtacattttattggacaaaagatttgaggatgggtagcatccc
cactggaagaagttgaagctatacaaaggcaacaagttgaaaacatgcca
agatcttacttctaattccttagggtatatgggactggttagatagttta
tgtgatcctgattaaagtttggtatagggtatctgtctacagaatcaacc
atgtcatctaggttttccagtttctgaggcttttgttataaaatctgaag
atttttcttttaattttttttttttaaaattttcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_121112674_121112942
seq2: B6Ng01-282M22.g_329_517

seq1  GTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTT  50
      |||||||||||||||||||||||||||||||||||||||||    || ||
seq2  GTTTTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGTTTT---GTTCTT  47

seq1  TGTTTTTTTGGGTTTTTTTTTTTTGGTTTTGATTTGTTTGACATTTGCGC  100
      ||||||||   ||| ||| ||||    ||| || || ||   || || | 
seq2  TGTTTTTT---GTTCTTTGTTTTGTAATTTAATATGATT---ATGTGAG-  90

seq1  TGGCATTCAAGAAGAGTGGATTTCTTTGTAGCAAGCTGTGTTCTTTACCC  150
              |||||| ||  ||||  ||| | |||            |   
seq2  --------AAGAAG-GTACATTTTATTGGA-CAA------------AAGA  118

seq1  TTTGTGCATCTGATGG---GCTT--GCTCTGGAAGACTCACTTGCTCTTT  195
      |||| |     |||||   || |   | ||||||||            ||
seq2  TTTGAG-----GATGGGTAGCATCCCCACTGGAAGA----------AGTT  153

seq1  GATCTTAGTGCATGGCCTTGGTCCCTGGGATGGCCACTGAATGTCACTTT  245
      ||   || | ||                 | ||| |              
seq2  GAAGCTA-TACA-----------------AAGGCAA--------------  171

seq1  GATTTCCAAGTTGAAAACATGCCA  269
            ||||||||||||||||||
seq2  ------CAAGTTGAAAACATGCCA  189


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