BAC Information

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BAC

Clone NameB6Ng01-283A11
Chromosome8 (Build37)
Map Location 58,595,380 - 58,596,340
singlet/doubletsinglet
Overlap geneGlra3
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, LOC664812
Downstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283A11.bB6Ng01-283A11.g
ACCGA082092GA082093
length1,241961
definitionB6Ng01-283A11.b B6Ng01-283A11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctgcaggcaagctctcctcttgcagggaaggttcacagatatc
tggtgttcagacctgcctcctggcagaagatgaaggcctgaaactgggcc
tttcccagaagctttgtcacttcggcctgtcccagaagttgttagcttct
gtagtccacactcttacctgtgcagactagtctctgagggatcagggatc
caaggtggctccctcaggtgctctgacaaagccctcccatgtggggcaga
tagctctcctctggcagggaaggtgcccgaatgtctggaacctgaaatgg
tgtctgcctcagaagctgtgttgcttctgcctgtcccagaaactgttagc
ttctgtagtctacactctcacctgcgcagactagtcttggagcagatttc
agaattttttaaatttctttttcaatattagactataattacaaccttgg
gaaagcaaagtccaatttcaaaacaatttgtcatgttagaatcaacatta
aaagttcaatatcacgttgccaaatttggctgctaatttatacctatgaa
tgcatgacagtgaaagtcttaatgcttcattaaagagacattgctttaaa
tcttacctttaattctactttctaggataagaatcacaataaatattatc
tcaactagaagtatccttagaggcccggcctcttggcctgcctaatgtca
ggtgttggaaagactccaaatgagttgccaatttaaagctaactttctag
taaccagtggtacacctatttgatcatacccaataacttataagctaata
ctttatgatgaagacacacatattacacctctaagaccagtaaaaaacca
aaaccaaatgaagtggctacacgaatctaataaatttagactattcaaag
aatttcaatttttctagttataagtataagacaaaaagcaccttgtcatt
agctaaatgcaataatcacggttgcagagaatttttctagataggaacaa
ctaccagccctatttgccttaaaactaagaaggttgcaactcccttttct
ttaaaaaaaaactgttttttccagtaaggagcccttcctggctggtgcct
tgaattctcaaccaaaggtctggagagccactcctctttgcctgacccag
cggattttggtttaagcaattcttttattttccatcattgaaataacagg
gaacattctcgaggtctcatttctcagaacacaacactacg
gaattcatattgatgtttgaatgtcaactgcagaatagttttattgacta
tatctgtactttcttgagatttattgttgaaatgacaaagaaacatgtgc
aagcacactaaaaaatttgcttttagaatgattttaaaagtatatattgc
cttctttcctctgatctcttatttccctaaatgataacttcccccagcaa
aggaaccaattattgtagttactagcaactttttaaatccacacatttca
aaatcaactacatggaaatcaaaccaattgcctttctctgttaattatgc
atttgacagtaaatttgtaaaacttatttaaacaatagatcttatctatt
tcttaactgtataaagagtgtttgaaaggcatctaataagagaaacatcc
aggtgacaattatataggtaatgtcgctatatctgactgtacatcacaat
atcttcctataattgacaatatcaatgcaccctggtgcctgggtgcttga
tgctttacagtcattcagtggcaatttttctgcttttggcatttccatat
tctaaatttatatttttatcattttaaaacctacaatgagataaaaaagt
tcattctggttgttatgagatcacacgtatgataatatgttgttgtgatg
gcagagacgaggcaattttgctgaatggccacatctaggctacaatgtac
agtctgtctctgccatttcaatctacaatagacagttatttgagttgtcc
ttcaatttaaggctcgaaataaaatgtaaggctatttaaattgtcagtgt
ttgatgcataattactaaaacattttttttctctgttcttaattttaaaa
gttttaaagtagagaggcccattggacaggcaaactttatatgccccaga
acaggggaacgccagggccaaaaatgggaacgggtgcgtaggggagtagg
ggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58595380_58596340
seq2: B6Ng01-283A11.g_65_1025

seq1  GAATTCATATTGATGTTTGAATGTCAACTGCAGAATAGTTTTATTGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATTGATGTTTGAATGTCAACTGCAGAATAGTTTTATTGACTA  50

seq1  TATCTGTACTTTCTTGAGATTTATTGTTGAAATGACAAAGAAACATGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTACTTTCTTGAGATTTATTGTTGAAATGACAAAGAAACATGTGC  100

seq1  AAGCACACTAAAAAATTTGCTTTTAGAATGATTTTAAAAGTATATATTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACACTAAAAAATTTGCTTTTAGAATGATTTTAAAAGTATATATTGC  150

seq1  CTTCTTTCCTCTGATCTCTTATTTCCCTAAATGATAACTTCCCCCAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTCCTCTGATCTCTTATTTCCCTAAATGATAACTTCCCCCAGCAA  200

seq1  AGGAACCAATTATTGTAGTTACTAGCAACTTTTTAAATCCACACATTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACCAATTATTGTAGTTACTAGCAACTTTTTAAATCCACACATTTCA  250

seq1  AAATCAACTACATGGAAATCAAACCAATTGCCTTTCTCTGTTAATTATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCAACTACATGGAAATCAAACCAATTGCCTTTCTCTGTTAATTATGC  300

seq1  ATTTGACAGTAAATTTGTAAAACTTATTTAAACAATAGATCTTATCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACAGTAAATTTGTAAAACTTATTTAAACAATAGATCTTATCTATT  350

seq1  TCTTAACTGTATAAAGAGTGTTTGAAAGGCATCTAATAAGAGAAACATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACTGTATAAAGAGTGTTTGAAAGGCATCTAATAAGAGAAACATCC  400

seq1  AGGTGACAATTATATAGGTAATGTCGCTATATCTGACTGTACATCACAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACAATTATATAGGTAATGTCGCTATATCTGACTGTACATCACAAT  450

seq1  ATCTTCCTATAATTGACAATATCAATGCACCCTGGTGCCTGGGTGCTTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCCTATAATTGACAATATCAATGCACCCTGGTGCCTGGGTGCTTGA  500

seq1  TGCTTTACAGTCATTCAGTGGCAATTTTTCTGCTTTTGGCATTTCCATAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTACAGTCATTCAGTGGCAATTTTTCTGCTTTTGGCATTTCCATAT  550

seq1  TCTAAATTTATATTTTTATCATTTTAAAACCTACAATGAGATAAAAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAATTTATATTTTTATCATTTTAAAACCTACAATGAGATAAAAAAGT  600

seq1  TCATTCTGGTTGTTATGAGATCACACGTATGATAATATGTTGTTGTGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCTGGTTGTTATGAGATCACACGTATGATAATATGTTGTTGTGATG  650

seq1  GCAGAGACGAGGCAATTTTGCTGAATGGCCACATCTAGGCTACAATGTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGACGAGGCAATTTTGCTGAATGGCCACATCTAGGCTACAATGTAC  700

seq1  AGTCTGTCTCTGCCATTTCAATCTACAATAGACAGTTATTTGAGTTGTCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGTCTCTGCCATTTCAATCTACAATAGACAGTTATTTGAGTTGTCC  750

seq1  TTCAATTTAAGGCTCGAAATAAAATGTAAGGCTATTTAAATTGTCAGTGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATTTAAGGCTCGAAATAAAATGTAAGGCTATTTAAATTGTCAGTGT  800

seq1  TTGATGCATAATTACTAAAACA-TTTTTTTCTCTGTTCTTAATTTTAAAA  849
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGATGCATAATTACTAAAACATTTTTTTTCTCTGTTCTTAATTTTAAAA  850

seq1  GTTTTAAAGTAGAGAGGCCCATTGGACAGGCAAACTTTATATGCCCCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTAAAGTAGAGAGGCCCATTGGACAGGCAAACTTTATATGCCCCAGA  900

seq1  ACAGGGGAACGCCAGGGCCAAAAAATGGGAACGGGTGCGTAGGGGAGTAG  949
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACAGGGGAACGCCAGGGCC-AAAAATGGGAACGGGTGCGTAGGGGAGTAG  949

seq1  GGGGGGGGGGAG  961
      |||||||||| |
seq2  GGGGGGGGGGGG  961