BAC Information

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BAC

Clone NameB6Ng01-283F23
Chromosome8 (Build37)
Map Location 32,307,254 - 32,414,412
singlet/doubletdoublet
Overlap geneFut10, LOC666330, LOC666568
Upstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13
Downstream gene7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1, 2010007E15Rik, EG666589
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283F23.bB6Ng01-283F23.g
ACCGA082351GA082352
length1,0781,174
definitionB6Ng01-283F23.b B6Ng01-283F23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,413,334 - 32,414,412)(32,307,254 - 32,308,427)
sequence
gaattcacccaacccacctgttcttcctctagtgtgttagtctagtctag
atccctgaattggggcccatagacaaagtgcatctccagggctactggcc
agccagcatggccccagattctccagaaagagcttgactcaaaaatgaaa
taaagtaaaataaaataaaataaaataaaataaaataaaataaaataaaa
taaaataaaataaaggagagcaataaggaaggcatctgccaagcatcaat
ggcctatcatttgtcctgttgtcattggttgtaaggggcctgtctctgtt
tgattatgactctttgaatggacccgagcagtttgtcatccagacatggc
atcgaatatgtttctttattatgttcctcagatcactgaggcacaaagat
cactcacaccctggaggctaccttcaatagggctgaattaattccctctt
tccctcctagcagaggcttcctaagaacatcatggttgacatgatcattt
tagtagctattagatcccataaagctttgtgatgaggtaagagaggagag
ccactcctctttttttcttaactgaacattcttcaagattaggagagggg
gaaaaaaaactgtgctggaagcagaatttctttgcatggctttgtgttgc
taaaacaaaacacccaaggctgggtactttatagagaagactgtttcatt
cagagtctcgaaggctaagacttatcaatttgggcttaggtaaagacccc
tttggcttctttacaacatggcagatgaaatcatagcacgcgtgaaaaaa
gaagatcatctactgagacaagcagccaaggagagagagaaggggccagt
ttgatcttactactgcaatctgctttcttagtaactaaactgtgtcttaa
aaaaaatccactgattcaaacaaaaatatagattctcatgatctgatcct
ttccctccaggccctcactcaagtttcagtgccattctatgagtcgagct
tatagcacacgaacttttaggacaaaccactataacctagttagctataa
ctggacttattgtaggtccctccagttc
gaattccagtttcaggttctctcctccaaacctagtatcaatgtggagac
attactaagtatttctagtcctcagtgtattcactgtaaggagtaataaa
gaccatgctttcccttgcatggcagagagattattaagttttcgtttcaa
ccagatggggtttcagcactgagggaggaaagtagacatgagtggcttat
gatttatgataactaagagctatctacaactgggttgtgtcttctgagag
ccgcctccctgtcttcttctctgtgtttatgtggcctttcctctgtgctt
ctatgtgcccagctgtacttctgtctccccttgtctagtgatctcagtta
tactggattagggccccagtgaccttatgtgaatgtaattatctcctttg
aggctataccaccaagtgcagacgtgtgcctgagtatatccttcagccca
catcatgtttttatagcttacacatttaaaatcaatgacatgatggttaa
tctccactgttctcttgactgggtttagaatcacctaggagacacacctc
tgggtctcttggtgagggcttttccagggatgtttagtagagaaaggaag
actaacctagactatgaaccttagtcacatgttcccaccacccagacccg
ctgccttttgcggcttccctgccattatgtgccatcttcccactctgtga
gacaaaggtgagcactccttctttaacttactcctcattgggtatttggt
cacagcgatgagaaaactgactaataccaatgatagtctacacatgacaa
tgcaaatgataactgtccaattaagcccaaacgctcttggagggaatcac
ggactttagacattattctaaatccacttcattatattttgtcagaacat
ttcactatgtgcatatgtattttagtttgaattttaattacttgcaaaaa
tcattcgtaaatacacacaggtattttaaaacaaatgcttgtagcatttc
actcagctatgcgttagtatgttttttctaacagaataagagcattttct
ttttgagactggctagtctatctcttgtctctcttggtctcttcctggcc
ctgcctaatttccaactcactatctcagtcctagatctcgtcttgaatgc
tgggaaatggtgtagaagtatgag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_32413334_32414412
seq2: B6Ng01-283F23.b_44_1121 (reverse)

seq1  GAACTGGAGGGAACTACAATAAGTCCAGTAATAGCCTACTAGGGTTATAG  50
      |||||||||||| |||||||||||||||| |||||  |||| ||||||||
seq2  GAACTGGAGGGACCTACAATAAGTCCAGTTATAGCTAACTA-GGTTATAG  49

seq1  TTGGTTTGTCCCTTAAAGGTTCGTGTGCTATAAGCTCGACCTCAATAGAA  100
       ||||||||||  |||| ||||||||||||||||||||| ||| ||||||
seq2  -TGGTTTGTCC--TAAAAGTTCGTGTGCTATAAGCTCGA-CTC-ATAGAA  94

seq1  TGGCACTGAAACTTGGGTGA-GGCCTGGAGGGAAAGGATCAGATCATGAG  149
      ||||||||||||||| |||| |||||||||||||||||||||||||||||
seq2  TGGCACTGAAACTTGAGTGAGGGCCTGGAGGGAAAGGATCAGATCATGAG  144

seq1  AATCTATATTTTTGTTTGAATCAGTGGATTTTTTTTTAAGACACAGTTTA  199
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATCTATATTTTTGTTTGAATCAGTGGA-TTTTTTTTAAGACACAGTTTA  193

seq1  GTTACTAAGAAAGCAGATTGCAGTAGTAAGATCAAACTGGCCCCTTCTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTAAGAAAGCAGATTGCAGTAGTAAGATCAAACTGGCCCCTTCTCT  243

seq1  CTCTCCTTGGCTGCTTGTCTCAGTAGATGATCTTCTTTTTTCACGCGTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTGGCTGCTTGTCTCAGTAGATGATCTTCTTTTTTCACGCGTGC  293

seq1  TATGATTTCATCTGCCATGTTGTAAAGAAGCCAAAGGGGTCTTTACCTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTTCATCTGCCATGTTGTAAAGAAGCCAAAGGGGTCTTTACCTAA  343

seq1  GCCCAAATTGATAAGTCTTAGCCTTCGAGACTCTGAATGAAACAGTCTTC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAAATTGATAAGTCTTAGCCTTCGAGACTCTGAATGAAACAGTCTTC  393

seq1  TCTATAAAGTACCCAGCCTTGGGTGTTTTGTTTTAGCAACACAAAGCCAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAGTACCCAGCCTTGGGTGTTTTGTTTTAGCAACACAAAGCCAT  443

seq1  GCAAAGAAATTCTGCTTCCAGCACAGTTTTTTTTCCCCCTCTCCTAATCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGAAATTCTGCTTCCAGCACAGTTTTTTTTCCCCCTCTCCTAATCT  493

seq1  TGAAGAATGTTCAGTTAAGAAAAAAAGAGGAGTGGCTCTCCTCTCTTACC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAATGTTCAGTTAAGAAAAAAAGAGGAGTGGCTCTCCTCTCTTACC  543

seq1  TCATCACAAAGCTTTATGGGATCTAATAGCTACTAAAATGATCATGTCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCACAAAGCTTTATGGGATCTAATAGCTACTAAAATGATCATGTCAA  593

seq1  CCATGATGTTCTTAGGAAGCCTCTGCTAGGAGGGAAAGAGGGAATTAATT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGATGTTCTTAGGAAGCCTCTGCTAGGAGGGAAAGAGGGAATTAATT  643

seq1  CAGCCCTATTGAAGGTAGCCTCCAGGGTGTGAGTGATCTTTGTGCCTCAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCCTATTGAAGGTAGCCTCCAGGGTGTGAGTGATCTTTGTGCCTCAG  693

seq1  TGATCTGAGGAACATAATAAAGAAACATATTCGATGCCATGTCTGGATGA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCTGAGGAACATAATAAAGAAACATATTCGATGCCATGTCTGGATGA  743

seq1  CAAACTGCTCGGGTCCATTCAAAGAGTCATAATCAAACAGAGACAGGCCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTGCTCGGGTCCATTCAAAGAGTCATAATCAAACAGAGACAGGCCC  793

seq1  CTTACAACCAATGACAACAGGACAAATGATAGGCCATTGATGCTTGGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAACCAATGACAACAGGACAAATGATAGGCCATTGATGCTTGGCAG  843

seq1  ATGCCTTCCTTATTGCTCTCC-----TTTATTTTATTTTATTTTATTTTA  894
      |||||||||||||||||||||     ||||||||||||||||||||||||
seq2  ATGCCTTCCTTATTGCTCTCCTTTATTTTATTTTATTTTATTTTATTTTA  893

seq1  TTTTATTTTATTTTATTTTATTTTATTTTACTTTATTTCATTTTTGAGTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTTATTTTATTTTATTTTATTTTACTTTATTTCATTTTTGAGTC  943

seq1  AAGCTCTTTCTGGAGAATCTGGGGCCATGCTGGCTGGCCAGTAGCCCTGG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCTTTCTGGAGAATCTGGGGCCATGCTGGCTGGCCAGTAGCCCTGG  993

seq1  AGATGCACTTTGTCTATGGGCCCCAATTCAGGGATCTAGACTAGACTAAC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCACTTTGTCTATGGGCCCCAATTCAGGGATCTAGACTAGACTAAC  1043

seq1  ACACTAGAGGAAGAACAGGTGGGTTGGGTGAATTC  1079
      |||||||||||||||||||||||||||||||||||
seq2  ACACTAGAGGAAGAACAGGTGGGTTGGGTGAATTC  1078

seq1: chr8_32307254_32308427
seq2: B6Ng01-283F23.g_64_1237

seq1  GAATTCCAGTTTCAGGTTCTCTCCTCCAAACCTAGTATCAATGTGGAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTTCAGGTTCTCTCCTCCAAACCTAGTATCAATGTGGAGAC  50

seq1  ATTACTAAGTATTTCTAGTCCTCAGTGTATTCACTGTAAGGAGTAATAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTAAGTATTTCTAGTCCTCAGTGTATTCACTGTAAGGAGTAATAAA  100

seq1  GACCATGCTTTCCCTTGCATGGCAGAGAGATTATTAAGTTTTCGTTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATGCTTTCCCTTGCATGGCAGAGAGATTATTAAGTTTTCGTTTCAA  150

seq1  CCAGATGGGGTTTCAGCACTGAGGGAGGAAAGTAGACATGAGTGGCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGATGGGGTTTCAGCACTGAGGGAGGAAAGTAGACATGAGTGGCTTAT  200

seq1  GATTTATGATAACTAAGAGCTATCTACAACTGGGTTGTGTCTTCTGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATGATAACTAAGAGCTATCTACAACTGGGTTGTGTCTTCTGAGAG  250

seq1  CCGCCTCCCTGTCTTCTTCTCTGTGTTTATGTGGCCTTTCCTCTGTGCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCCTCCCTGTCTTCTTCTCTGTGTTTATGTGGCCTTTCCTCTGTGCTT  300

seq1  CTATGTGCCCAGCTGTACTTCTGTCTCCCCTTGTCTAGTGATCTCAGTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGTGCCCAGCTGTACTTCTGTCTCCCCTTGTCTAGTGATCTCAGTTA  350

seq1  TACTGGATTAGGGCCCCAGTGACCTTATGTGAATGTAATTATCTCCTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGATTAGGGCCCCAGTGACCTTATGTGAATGTAATTATCTCCTTTG  400

seq1  AGGCTATACCACCAAGTGCAGACGTGTGCCTGAGTATATCCTTCAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATACCACCAAGTGCAGACGTGTGCCTGAGTATATCCTTCAGCCCA  450

seq1  CATCATGTTTTTATAGCTTACACATTTAAAATCAATGACATGATGGTTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTTTTTATAGCTTACACATTTAAAATCAATGACATGATGGTTAA  500

seq1  TCTCCACTGTTCTCTTGACTGGGTTTAGAATCACCTAGGAGACACACCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCACTGTTCTCTTGACTGGGTTTAGAATCACCTAGGAGACACACCTC  550

seq1  TGGGTCTCTTGGTGAGGGCTTTTCCAGGGATGTTTAGTAGAGAAAGGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTCTTGGTGAGGGCTTTTCCAGGGATGTTTAGTAGAGAAAGGAAG  600

seq1  ACTAACCTAGACTATGAACCTTAGTCACATGTTCCCACCACCCAGACCCG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACCTAGACTATGAACCTTAGTCACATGTTCCCACCACCCAGACCCG  650

seq1  CTGCCTTTTGCGGCTTCCCTGCCATTATGTGCCATCTTCCCACTCTGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTTGCGGCTTCCCTGCCATTATGTGCCATCTTCCCACTCTGTGA  700

seq1  GACAAAGGTGAGCACTCCTTCTTTAACTTACTCCTCATTGGGTATTTGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAGGTGAGCACTCCTTCTTTAACTTACTCCTCATTGGGTATTTGGT  750

seq1  CACAGCGATGAGAAAACTGACTAATACCAATGATAGTCTACACATGACAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCGATGAGAAAACTGACTAATACCAATGATAGTCTACACATGACAA  800

seq1  TGCAAATGATAACTGTCCAATTAAGCCCAAACGCTCTTGGAGGGAATCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAATGATAACTGTCCAATTAAGCCCAAACGCTCTTGGAGGGAATCAC  850

seq1  GGACTTTAGACATTATTCTAAATCCACTTCATTATATTTTGTCAGAACA-  899
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGACTTTAGACATTATTCTAAATCCACTTCATTATATTTTGTCAGAACAT  900

seq1  TTCACTATGTGCATATGTATTTTTAGTTTTGAATTTTAATTACTTGCAAA  949
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  TTCACTATGTGCATATGTA-TTTTAG-TTTGAATTTTAATTACTTGCAAA  948

seq1  AATCATTCGTAAATACACACAGGGTATTTTAAAACAAATGCTTGTAGCAT  999
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AATCATTCGTAAATACACACA-GGTATTTTAAAACAAATGCTTGTAGCAT  997

seq1  TTCACTCAGCTATGCGTTAGTATG-TTTTTCTAACAG-ATAAGAACCATT  1047
      |||||||||||||||||||||||| |||||||||||| |||||| |   |
seq2  TTCACTCAGCTATGCGTTAGTATGTTTTTTCTAACAGAATAAGAGC--AT  1045

seq1  TTTCTTTTTGAGACTGGGTTGGTCTATCTCTTGTCTCTCTGTGTCTC-TC  1096
      ||||||||||||||| || | |||||||||||||||||||  ||||| ||
seq2  TTTCTTTTTGAGACT-GGCTAGTCTATCTCTTGTCTCTCTTGGTCTCTTC  1094

seq1  CT-GCCCTGGCTAATTTCAAACTCACTATCCTCCTGTCCTAGAGCCTCTC  1145
      || |||||| |||||||| |||||||||||   | ||||||||   ||||
seq2  CTGGCCCTGCCTAATTTCCAACTCACTATC--TCAGTCCTAGA---TCTC  1139

seq1  GTCTTGGATGCTGG--AATTGTG----AGTATGAG  1174
      |||||| |||||||  ||| |||    ||||||||
seq2  GTCTTGAATGCTGGGAAATGGTGTAGAAGTATGAG  1174