BAC Information

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BAC

Clone NameB6Ng01-283G13
Chromosome8 (Build37)
Map Location 31,810,708 - 31,952,972
singlet/doubletdoublet
Overlap genenone
Upstream geneEG628189
Downstream geneLOC547008, Dusp26, Rnf122, BC019943, Rbm13, Fut10, LOC666330, LOC666568, 7420700N18Rik, LOC100041329, EG330731, LOC100041340, Nrg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283G13.bB6Ng01-283G13.g
ACCGA082378GA082379
length1,184549
definitionB6Ng01-283G13.b B6Ng01-283G13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,810,708 - 31,811,877)(31,952,418 - 31,952,972)
sequence
gaattcaatgtgtcttgcaaacacacattgaactaagagtggtacactgc
catggaattctggagaaggttatggcaagtagcaccatcacatgcctgca
gctggatgccatggtcactctgagattttctaagtcttgcaaaaagcaga
gtggatggaagatggaaggcgaggacacgctcaagctgttcactgattac
tgaaccactagaatttcccccaccccctgccaactaagcttcttttaacc
tcagatttgcacgtacagcccaggttggtgcatcaaggtagctcagaaga
aagtccaacatggtgctggctgagtgcatgtaaatggtcctgcctggctc
ccaatctcgtatcctcttgaaggagacgtcataaagtgtctttagaaagg
agcgccaagggtttcaaagtggtaaggaggctttgaaagagcttcaggat
cagtgatgtgcttgccagaactgaagtgataatggagtgcatttgcttcc
acatcctatagaccagccatacaaagaggacctccagccttgagacatga
cctttgattgacagagggagcagatctgtcagaatccctaggagaaaatc
aaagagttctaaacttaacttcgttttctctcattcttttgtctggggag
agtcctacattgattaaatccaatggaagacagagttaaaggcatctttg
agtctatttttgttgcccaaacaccctgacaccagaattagaatacatag
ggatagataaacctgccaaggtgccctgaagtttccataaagtttgattt
agtttgcatttcagtatttctgggctatggtaccccaaggtttgtgagtg
ttacatcatgacgaagacatcatgtatagtgttaacatccaagtcacatg
agaaacttccattgactaagaacagttgttttcaacatgtagaaatcatt
acgtaccccaataatattagattatatttctaacagagaaagtgatatgg
ggactgtcaaataagaattggtgatttttatttttcaaacaggttgccct
gtagaataataaaacaatatgaaccctaaaaccctttgtaattcctttat
gttcctacaccggaaataatttccacaccttccttgtacctcagtccatc
atgaaatactactattctgtattccgaaatcaat

atgcaggctatggcaaggaagttttttatggattgtaggcaaagggaaat
gatgtgtctgccacaagctgggcttttgtccaactatagttacctaggta
ggaatttggaagacaggcaacttccaggaaggttgcaacagccatcagaa
atgcagagctgggcctttggtgcttttttcttctttgttcaccttctgtg
tgggcacggttagagagagactgaggaacggaccttgcggggaggtgggg
caagcccagtataacatcctgacatccttgggtgtgtggaggctggtcca
tgtctcactgcttcttgctgaaaggggacagcacagggtaggggagtcag
gagtcagtgggtgtgcccagtgctcagggagaattgtgggtgaagaagca
cctgtgtcacttttactggaaacgtctcaaatccatttccggagaaggtg
gaggaggcaaggtgtgaaaaagaaaaaaaaaagccaagtaagaatgaggg
atcttattactgggatggatcattgaaaagtgtttggggagggaggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_31810708_31811877
seq2: B6Ng01-283G13.b_45_1228

seq1  GAATTCAATGTGTCTTGCAAACACACATTGAACTAAGAGTGGTACACTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTGTCTTGCAAACACACATTGAACTAAGAGTGGTACACTGC  50

seq1  CATGGAATTCTGGAGAAGGTTATGGCAAGTAGCACCATCACATGCCTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGAATTCTGGAGAAGGTTATGGCAAGTAGCACCATCACATGCCTGCA  100

seq1  GCTGGATGCCATGGTCACTCTGAGATTTTCTAAGTCTTGCAAAAAGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGATGCCATGGTCACTCTGAGATTTTCTAAGTCTTGCAAAAAGCAGA  150

seq1  GTGGATGGAAGATGGAAGGCGAGGACACGCTCAAGCTGTTCACTGATTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATGGAAGATGGAAGGCGAGGACACGCTCAAGCTGTTCACTGATTAC  200

seq1  TGAACCACTAGAATTTCCCCCACCCCCTGCCAACTAAGCTTCTTTTAACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCACTAGAATTTCCCCCACCCCCTGCCAACTAAGCTTCTTTTAACC  250

seq1  TCAGATTTGCACGTACAGCCCAGGTTGGTGCATCAAGGTAGCTCAGAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATTTGCACGTACAGCCCAGGTTGGTGCATCAAGGTAGCTCAGAAGA  300

seq1  AAGTCCAACATGGTGCTGGCTGAGTGCATGTAAATGGTCCTGCCTGGCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCCAACATGGTGCTGGCTGAGTGCATGTAAATGGTCCTGCCTGGCTC  350

seq1  CCAATCTCGTATCCTCTTGAAGGAGACGTCATAAAGTGTCTTTAGAAAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCTCGTATCCTCTTGAAGGAGACGTCATAAAGTGTCTTTAGAAAGG  400

seq1  AGCGCCAAGGGTTTCAAAGTGGTAAGGAGGCTTTGAAAGAGCTTCAGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGCCAAGGGTTTCAAAGTGGTAAGGAGGCTTTGAAAGAGCTTCAGGAT  450

seq1  CAGTGATGTGCTTGCCAGAACTGAAGTGATAATGGAGTGCATTTGCTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATGTGCTTGCCAGAACTGAAGTGATAATGGAGTGCATTTGCTTCC  500

seq1  ACATCCTATAGACCAGCCATACAAAGAGGACCTCCAGCCTTGAGACATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTATAGACCAGCCATACAAAGAGGACCTCCAGCCTTGAGACATGA  550

seq1  CCTTTGATTGACAGAGGGAGCAGATCTGTCAGAATCCCTAGGAGAAAATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGATTGACAGAGGGAGCAGATCTGTCAGAATCCCTAGGAGAAAATC  600

seq1  AAAGAGTTCTAAACTTAACTTCGTTTTCTCTCATTCTTTTGTCTGGGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTCTAAACTTAACTTCGTTTTCTCTCATTCTTTTGTCTGGGGAG  650

seq1  AGTCCTACATTGATTAAATCCAATGGAAGACAGAGTTAAAGGCATCTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTACATTGATTAAATCCAATGGAAGACAGAGTTAAAGGCATCTTTG  700

seq1  AGTCTATTTTTGTTGCCCAAACACCCTGACACCAGAATTAGAATACATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATTTTTGTTGCCCAAACACCCTGACACCAGAATTAGAATACATAG  750

seq1  GGATAGATAAACCTGCCAAGGTGCCCTGAAGTTTCCATAAAGTTTGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGATAAACCTGCCAAGGTGCCCTGAAGTTTCCATAAAGTTTGATTT  800

seq1  AGTTTGCATTTCAGTATTTCTGGGCTATGGTACCCCAAGGTTTGTGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGCATTTCAGTATTTCTGGGCTATGGTACCCCAAGGTTTGTGAGTG  850

seq1  TTACATCATGACGAAGACATCATGTATAGTGTTAACATCCAAGTCACATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCATGACGAAGACATCATGTATAGTGTTAACATCCAAGTCACATG  900

seq1  AGAAACTTCCATTGACTAAGAACAGTTGTTTTCAACATGTAGAAATCATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACTTCCATTGACTAAGAACAGTTGTTTTCAACATGTAGAAATCATT  950

seq1  ACGTACCCCAATAATATTAGATTATATTTCTAACAGAGAAAGTGATATGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTACCCCAATAATATTAGATTATATTTCTAACAGAGAAAGTGATATGG  1000

seq1  GGACTGTCAAATAAGAATTGGTTGATTTTA-TTTTCAAACA-GTTG-CCT  1047
      ||||||||||||||||||||||   ||||| |||||||||| |||| |||
seq2  GGACTGTCAAATAAGAATTGGTGATTTTTATTTTTCAAACAGGTTGCCCT  1050

seq1  GTAGAATA--TAAACAATATGAA-CCTAGA--CCTTTGTAATT-CTTTAT  1091
      ||||||||   |||||||||||| |||| |  ||||||||||| ||||||
seq2  GTAGAATAATAAAACAATATGAACCCTAAAACCCTTTGTAATTCCTTTAT  1100

seq1  GTT-CTACAC--GGAATATTTTCAACA-CTTCC-TGTA-CTCAGT-CATC  1134
      ||| ||||||  | |||| |||| ||| ||||| |||| |||||| ||||
seq2  GTTCCTACACCGGAAATAATTTCCACACCTTCCTTGTACCTCAGTCCATC  1150

seq1  ATTTAAATAACTACTATTCTGTATTTCCGATTCAAT  1170
      | | |||| |||||||||||||||| |  | |||||
seq2  A-TGAAAT-ACTACTATTCTGTATTCCGAAATCAAT  1184


seq1: chr8_31952418_31952972
seq2: B6Ng01-283G13.g_64_618 (reverse)

seq1  CCCCCTCCCTCCCCAAACACTTTTCAATGATCCATCCCAGTAATAAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTCCCTCCCCAAACACTTTTCAATGATCCATCCCAGTAATAAGATC  50

seq1  CCTCATTCTTACTTGGCTTTTTTTTTTCTTTTTCACACCTTGCCTCCTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCATTCTTACTTGGCTTTTTTTTTTCTTTTTCACACCTTGCCTCCTCC  100

seq1  ACCTTCTCCGGAAATGGATTTGAGACGTTTCCAGTAAAAGTGACACAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTCCGGAAATGGATTTGAGACGTTTCCAGTAAAAGTGACACAGGT  150

seq1  GCTTCTTCACCCACAATTCTCCCTGAGCACTGGGCACACCCACTGACTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCACCCACAATTCTCCCTGAGCACTGGGCACACCCACTGACTCC  200

seq1  TGACTCCCCTACCCTGTGCTGTCCCCTTTCAGCAAGAAGCAGTGAGACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCCCCTACCCTGTGCTGTCCCCTTTCAGCAAGAAGCAGTGAGACAT  250

seq1  GGACCAGCCTCCACACACCCAAGGATGTCAGGATGTTATACTGGGCTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGCCTCCACACACCCAAGGATGTCAGGATGTTATACTGGGCTTGC  300

seq1  CCCACCTCCCCGCAAGGTCCGTTCCTCAGTCTCTCTCTAACCGTGCCCAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTCCCCGCAAGGTCCGTTCCTCAGTCTCTCTCTAACCGTGCCCAC  350

seq1  ACAGAAGGTGAACAAAGAAGAAAAAAGCACCAAAGGCCCAGCTCTGCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGGTGAACAAAGAAGAAAAAAGCACCAAAGGCCCAGCTCTGCATT  400

seq1  TCTGATGGCTGTTGCAACCTTCCTGGAAGTTGCCTGTCTTCCAAATTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGGCTGTTGCAACCTTCCTGGAAGTTGCCTGTCTTCCAAATTCCT  450

seq1  ACCTAGGTAACTATAGTTGGACAAAAGCCCAGCTTGTGGCAGACACATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAGGTAACTATAGTTGGACAAAAGCCCAGCTTGTGGCAGACACATCA  500

seq1  TTTCCCTTTGCCTACAATCCATAAAAAACTTCCTTGCCATAGCCTGCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTTTGCCTACAATCCATAAAAAACTTCCTTGCCATAGCCTGCATG  550

seq1  AATTC  555
      |||||
seq2  AATTC  555


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