BAC Information

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BAC

Clone NameB6Ng01-283P04
Chromosome8 (Build37)
Map Location 92,854,883 - 93,032,131
singlet/doubletdoublet
Overlap geneTox3
Upstream genenone
Downstream geneLOC100041133, Chd9, LOC100041156, EG626231, Rbl2, Aktip, LOC667162, LOC100041222, Rpgrip1l, AJ237917
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-283P04.bB6Ng01-283P04.g
ACCGA082775GA082776
length1,156936
definitionB6Ng01-283P04.b B6Ng01-283P04.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,854,883 - 92,856,053)(93,031,200 - 93,032,131)
sequence
gaattccaggcatagaagagcagggagggtcacagggtaaagggagggct
gggaaaggatctagcaggtacactaggcaactaacttcttggaagatgcc
agaccactgcaatacttcttagaatttgttcttttagatgcattgctttc
atgcttacaccctgtcaactgtccccaagggtgtacaagtagctaataaa
actggaagtaaagaactctaaatgagtagtgtaaaactttacacctagtt
atgtactgagattatcctgcgtgcgggcacagtgcaccgagcagaaaaca
aagtatatgtgtccattgctcctgaaaattcacaggcgaaaggggctgca
ctgcctaccaaatttcagtgtgctccatgctaaacacagggatcattcca
tgagtttctaagatatatgcacagattatccctccaaaatagctttgtga
cttagtttaaccacctaaagatgtaggtgggccctaactgagtcaattcc
ctgtcggtcagtaggcaaattacaattccttgagtgaacacaggctttct
ctttcttggtccactcaatttgcacagctttgtaaacccaagagatattt
tcattaacccagagccattctcagagagtaggaagaagaaaaaaagaagc
atttggtaaatggcaagagaaatgcagattattttaactgatcgagtagc
ttccttccttggcaaccatctctgtcaaaatgagtggtggccttcgagct
actctgaggaacatacagtgacagagcctccttttctcctttagacccta
aaaagatacctgccctttgtgttaataaattccctttgtaacaaaagtta
ctcatccaggttaggggttttaaatgacaatatcagaaagtccccccacc
ccacccccaaatttttaaaccaagcagaacaaagcagtagctcccatcta
gaaattatatgacagtgtctagagacattctttatttgtcacaacagagg
gaaagaggccttggccttcagtgagtggaggccagcgatgctactaaaca
ctctacagaacactcaagacgtctgccccaaatactgaagtgatcagata
agaaatctgccagtgaacattaacagaccaccggtctatgcgaactcatg
atgaaa

gaattcaagtgatgtcatatgattttgattttcttcaccgggcttctgga
tagacaaggaactgtggagaagcaaacagtggaatccagaagagcactgg
ctgtccttgttgggttcctgggaacaatggcttgaacccagagccaggaa
ttggcagccaatgacgtctcctgatgaattcccagctggggaatggagga
tcttctctgtttgctgtctgggtagagggagggaagagggggcagtgtca
ctgattaaagggagaagtctgcttggaagctccagactccactgggcaca
aaataaagattgtgttgagccagagtgagtgagccggtttgaccagaagc
agcttttctgtcacctgcagagtgcaaataagatctgtctatgttcaatg
aaaacaccttcagtcagtgtcttgaaactggcttcctccttctcaattaa
gtcgacgacaattaaattagagtccagcttcgaggggttcattatgcctc
atggaaaatgatgaacaacccttactgacctcctcacctcactgacacag
ccacacctcatttttcaaagagctaatgaaaccgatagatttctctctcg
tcagtagcagggccaaggcaaaaagtgtgcttacagtggtgcgcttggga
gtggagacaggactgggagaggacgcctgccttttacgttttgacaagtg
gccagagtgactttgaagtgcacatttgggggaagaaatatatatacaca
tttatgtacgtaaatgataaataattatataatacataaaatacataaat
ctctttatataatgtatataaataaatgtatacataaatataaatatata
aaatatataggtataaaatatttttaaaaataaaatataaaatggtatag
aaatatataatatgtaatgttatatcattttatata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_92854883_92856053
seq2: B6Ng01-283P04.b_47_1202

seq1  GAATTCCAGGCATAGAAGAGCAGGGAGGGTCACAGGG-AAAGGGAGGGCT  49
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCCAGGCATAGAAGAGCAGGGAGGGTCACAGGGTAAAGGGAGGGCT  50

seq1  GGGAAAGGATCTAGCAGGTACACTAGGCAACTAACTTCTTGGAAGATGCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAGGATCTAGCAGGTACACTAGGCAACTAACTTCTTGGAAGATGCC  100

seq1  AGACCACTGCAATACTTCTTAGAATTTGTTCTTTTAGATGCATTGCTTTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCACTGCAATACTTCTTAGAATTTGTTCTTTTAGATGCATTGCTTTC  150

seq1  ATGCTTACACCCTGTCAACTGTCCCCAAGGGTGTACAAGTAGCTAATAAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTACACCCTGTCAACTGTCCCCAAGGGTGTACAAGTAGCTAATAAA  200

seq1  ACTGGAAGTAAAGAACTCTAAATGAGTAGTGTAAAACTTTACACCTAGTT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAAGTAAAGAACTCTAAATGAGTAGTGTAAAACTTTACACCTAGTT  250

seq1  ATGTACTGAGATTATCCTGCGTGCGGGCACAGTGCACCGAGCAGAAAACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTACTGAGATTATCCTGCGTGCGGGCACAGTGCACCGAGCAGAAAACA  300

seq1  AAGTATATGTGTCCATTGCTCCTGAAAATTCACAGGCGAAAGGGGCTGCA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATATGTGTCCATTGCTCCTGAAAATTCACAGGCGAAAGGGGCTGCA  350

seq1  CTGCCTACCAAATTTCAGTGTGCTCCATGCTAAACACAGGGATCATTCCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTACCAAATTTCAGTGTGCTCCATGCTAAACACAGGGATCATTCCA  400

seq1  TGAGTTTCTAAGATATATGCACAGATTATCCCTCCAAAATAGCTTTGTGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTCTAAGATATATGCACAGATTATCCCTCCAAAATAGCTTTGTGA  450

seq1  CTTAGTTTAACCACCTAAAGATGTAGGTGGGCCCTAACTGAGTCAATTCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTTAACCACCTAAAGATGTAGGTGGGCCCTAACTGAGTCAATTCC  500

seq1  CTGTCGGTCAGTAGGCAAATTACAATTCCTTGAGTGAACACAGGCTTTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCGGTCAGTAGGCAAATTACAATTCCTTGAGTGAACACAGGCTTTCT  550

seq1  CTTTCTTGGTCCACTCAATTTGCACAGCTTTGTAAACCCAAGAGATATTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGGTCCACTCAATTTGCACAGCTTTGTAAACCCAAGAGATATTT  600

seq1  TCATTAACCCAGAGCCATTCTCAGAGAGTAGGAAGAAGAAAAAAAGAAGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTAACCCAGAGCCATTCTCAGAGAGTAGGAAGAAGAAAAAAAGAAGC  650

seq1  ATTTGGTAAATGGCAAGAGAAATGCAGATTATTTTAACTGATCGAGTAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGTAAATGGCAAGAGAAATGCAGATTATTTTAACTGATCGAGTAGC  700

seq1  TTCCTTCCTTGGCAACCATCTCTGTCAAAATGAGTGGTGGCCTTCGAGCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTGGCAACCATCTCTGTCAAAATGAGTGGTGGCCTTCGAGCT  750

seq1  ACTCTGAGGAACATACAGTGACAGAGCCTCCTTTTCTCCTTTAGACCCTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGGAACATACAGTGACAGAGCCTCCTTTTCTCCTTTAGACCCTA  800

seq1  AAAAGATACCTGCCCTTTGTGTTAATAAATTCCCTTTGTAACAAAAGTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGATACCTGCCCTTTGTGTTAATAAATTCCCTTTGTAACAAAAGTTA  850

seq1  CTCATCCAGGTTAGGGGTTTTAAATGACAATATCAGAAAGTCCCCCCACC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCCAGGTTAGGGGTTTTAAATGACAATATCAGAAAGTCCCCCCACC  900

seq1  CCACCCCCAAATTTTAAAACCAAAGCAGAACAAAGCAGTAGCTCCCATCT  949
      ||||||||||||||| ||||| ||||||||||||||||||||||||||||
seq2  CCACCCCCAAATTTTTAAACC-AAGCAGAACAAAGCAGTAGCTCCCATCT  949

seq1  AGAAATTATATGACAGTGTCTAGAGACATTCTTTATTTGTCACAACAGAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTATATGACAGTGTCTAGAGACATTCTTTATTTGTCACAACAGAG  999

seq1  GGAAAGAGGCC-TGGCCTTCAGTGAGTGGAGGCCAGCGATGCTACTAAAC  1048
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGAGGCCTTGGCCTTCAGTGAGTGGAGGCCAGCGATGCTACTAAAC  1049

seq1  ACTCTACAGAACACTCAAAGAACCGTCTGCCCCAAATACTGAAAGTGATC  1098
      |||||||||||||||| ||||  |||||||||||||||||| ||||||||
seq2  ACTCTACAGAACACTC-AAGA--CGTCTGCCCCAAATACTG-AAGTGATC  1095

seq1  AGGATAAGAAATCTTGCCCAAGTGAAACATTAAACAAGACCACCGGGGTC  1148
      | ||||||||||| ||||  |||| ||||||||   ||||||||||    
seq2  A-GATAAGAAATC-TGCC--AGTG-AACATTAA--CAGACCACCGG---T  1135

seq1  CTATGCCAGAACTCATGATGAAA  1171
      ||||||  |||||||||||||||
seq2  CTATGC--GAACTCATGATGAAA  1156


seq1: chr8_93031200_93032131
seq2: B6Ng01-283P04.g_66_1001 (reverse)

seq1  TATATAAAAT-ATATAACATTACATATTATATATTTCTATA-CATTTTAT  48
      |||||||||| |||||||||||||||||||||||||||||| ||||||||
seq2  TATATAAAATGATATAACATTACATATTATATATTTCTATACCATTTTAT  50

seq1  ATTTTATTTTT-AAAATATTTTATA-CTATATATTTTATATATTTATATT  96
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  ATTTTATTTTTAAAAATATTTTATACCTATATATTTTATATATTTATATT  100

seq1  TATGTATACATTTATTTATATACATTATATAAAGAGATTTATGTATTTTA  146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTATACATTTATTTATATACATTATATAAAGAGATTTATGTATTTTA  150

seq1  TGTATTATATAATTATTTATCATTTACGTACATAAATGTGTATATATATT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTATATAATTATTTATCATTTACGTACATAAATGTGTATATATATT  200

seq1  TCTTCCCCCAAATGTGCACTTCAAAGTCACTCTGGCCACTTGTCAAAACG  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCCAAATGTGCACTTCAAAGTCACTCTGGCCACTTGTCAAAACG  250

seq1  TAAAAGGCAGGCGTCCTCTCCCAGTCCTGTCTCCACTCCCAAGCGCACCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGGCAGGCGTCCTCTCCCAGTCCTGTCTCCACTCCCAAGCGCACCA  300

seq1  CTGTAAGCACACTTTTTGCCTTGGCCCTGCTACTGACGAGAGAGAAATCT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAAGCACACTTTTTGCCTTGGCCCTGCTACTGACGAGAGAGAAATCT  350

seq1  ATCGGTTTCATTAGCTCTTTGAAAAATGAGGTGTGGCTGTGTCAGTGAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGTTTCATTAGCTCTTTGAAAAATGAGGTGTGGCTGTGTCAGTGAGG  400

seq1  TGAGGAGGTCAGTAAGGGTTGTTCATCATTTTCCATGAGGCATAATGAAC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAGGTCAGTAAGGGTTGTTCATCATTTTCCATGAGGCATAATGAAC  450

seq1  CCCTCGAAGCTGGACTCTAATTTAATTGTCGTCGACTTAATTGAGAAGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGAAGCTGGACTCTAATTTAATTGTCGTCGACTTAATTGAGAAGGA  500

seq1  GGAAGCCAGTTTCAAGACACTGACTGAAGGTGTTTTCATTGAACATAGAC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAGTTTCAAGACACTGACTGAAGGTGTTTTCATTGAACATAGAC  550

seq1  AGATCTTATTTGCACTCTGCAGGTGACAGAAAAGCTGCTTCTGGTCAAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTATTTGCACTCTGCAGGTGACAGAAAAGCTGCTTCTGGTCAAAC  600

seq1  CGGCTCACTCACTCTGGCTCAACACAATCTTTATTTTGTGCCCAGTGGAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCTCACTCACTCTGGCTCAACACAATCTTTATTTTGTGCCCAGTGGAG  650

seq1  TCTGGAGCTTCCAAGCAGACTTCTCCCTTTAATCAGTGACACTGCCCCCT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGCTTCCAAGCAGACTTCTCCCTTTAATCAGTGACACTGCCCCCT  700

seq1  CTTCCCTCCCTCTACCCAGACAGCAAACAGAGAAGATCCTCCATTCCCCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCTCCCTCTACCCAGACAGCAAACAGAGAAGATCCTCCATTCCCCA  750

seq1  GCTGGGAATTCATCAGGAGACGTCATTGGCTGCCAATTCCTGGCTCTGGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGAATTCATCAGGAGACGTCATTGGCTGCCAATTCCTGGCTCTGGG  800

seq1  TTCAAGCCATTGTTCCCAGGAACCCAACAAGGACAGCCAGTGCTCTTCTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAGCCATTGTTCCCAGGAACCCAACAAGGACAGCCAGTGCTCTTCTG  850

seq1  GATTCCACTGTTTGCTTCTCCACAGTTCCTTGTCTATCCAGAAGCCCGGT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCACTGTTTGCTTCTCCACAGTTCCTTGTCTATCCAGAAGCCCGGT  900

seq1  GAAGAAAATCAAAATCATATGACATCACTTGAATTC  932
      ||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAATCAAAATCATATGACATCACTTGAATTC  936


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