BAC Information

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BAC

Clone NameB6Ng01-284J18
Chromosome8 (Build37)
Map Location 60,013,362 - 60,014,501
singlet/doubletsinglet
Overlap geneGalnt7
Upstream geneBC088983, Fbxo8, LOC100040431, EG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012
Downstream geneLOC100040634, LOC100040711, 4930431L04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-284J18.bB6Ng01-284J18.g
ACCGA083268GA083269
length1,1461,170
definitionB6Ng01-284J18.b B6Ng01-284J18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttccttccacacagagggtttctgggagattaaaacgtaacta
agtctggtctggactgccccagattcacgtttttctcagcgggttactgg
ctagatttctgtaacaggagagatggaataagcctgccaaggaaagacac
aggcattattacaggaagtcaaagagcagttgcagtgtcctctgtgtttc
tctttctacaccccaactctcaacactgcagactcttacagatgggttca
gtcctctcttctctgtctctatttctttctctatggctgcaatgtcactg
cgctggatgctaatggtctccagatgttgatttctggagaagtctctttt
ctagggttcggcacaagatcctcaaccaacaggagctgacagctgcacac
ggcctgccgtctagaagtcatcctgcaggtgggaaccacaaacagaccca
agagtgctacacctcaacacctccacgttccctgcccactgtgcgcctgc
ctcagctgccccctaaccagctgctcaaatagaaaacgaaagcatcccag
ccctcatctttcacacactgatactccgcacccacattctctgacaatat
ctgtgacttggtgtttgccttggctatgtcttgtgctctgccttcctcta
agccacagtcactgtccccagtgggtagcactgtttggagaggcttaagg
ggtgtggccttggaggaagtatgtcataggcaatgagttctgagagtcta
aagactcagcatttccagctccgtctctgcgttggccttgcagtttagga
tgtgaactcccaaccagcttgctactccagccgccatgcttgctgccatt
ccttattttgcccatttcgatggactcttaaccctttaggatcgtaagcc
caaataaactctttctttcagggatttcctcagtcaagttatttttagca
cagcaacagataagttaatgagtgcaatttcctatctttgaaagtcacca
ctttctgtctctcttttttttggctctctgactggcttaaggttctttat
catcaggttttcagatctaatgtcatatccccagaaagccatcttaccgt
ttcgacctctcaagactgtaccctcacactcagttagccttggagc
gaattctcacctgaggtaataccgaatggcagagaagcacctgaaaaaat
gttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgaga
ttccacctcacaccagtcagaatggctaagatcaaaaactcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaactggtgagaaggacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctggagggcatcatcctgagtgaggtaacacattcacaa
aggaactcacacaatatgtactcactgataagtggatattagcccaaaac
ctaggatacccaagatataagatacaatttcctaaacacatgaaactcaa
gaaaaatgaagactgaagtgtggacactatgcccctccttagaagtggga
acaaaacacccttggaaggagttacagagacaaagtttggagctgagatg
aaaggatgaaccatgtagagactgccatatccagggatccaccccataat
cagcatccaaacgctgacaccattgcatacactagcaagattttatcgaa
aggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaa
cacagaagtggatgcccacagtcagctaatggatggatcacagggctccc
aatggagagctagagaaagtaccaggagctaaagggatctgcaacctata
ggtggatcaacattatgactaaccagtactcggagctctgactctagctg
cattatgtatcaaagattggctagtcgccatcactggaagaaaggtccca
attgacacactacttattgcctagaacaggtatcgccaaggtcaaaaaag
gcggaatgtgtcgctgatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_60013362_60014501
seq2: B6Ng01-284J18.b_49_1194

seq1  GAATTCCTTCCTTCCACACAGAGGGTTTCTGGGAGATTAAAACGTAACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTCCACACAGAGGGTTTCTGGGAGATTAAAACGTAACTA  50

seq1  AGTCTGGTCTGGACTGCCCCAGATTCACGTTTTTCTCAGCGGGTTACTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGGTCTGGACTGCCCCAGATTCACGTTTTTCTCAGCGGGTTACTGG  100

seq1  CTAGATTTCTGTAACAGGAGAGATGGAATAAGCCTGCCAAGGAAAGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATTTCTGTAACAGGAGAGATGGAATAAGCCTGCCAAGGAAAGACAC  150

seq1  AGGCATTATTACAGGAAGTCAAAGAGCAGTTGCAGTGTCCTCTGTGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTATTACAGGAAGTCAAAGAGCAGTTGCAGTGTCCTCTGTGTTTC  200

seq1  TCTTTCTACACCCCAACTCTCAACACTGCAGACTCTTACAGATGGGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTACACCCCAACTCTCAACACTGCAGACTCTTACAGATGGGTTCA  250

seq1  GTCCTCTCTTCTCTGTCTCTATTTCTTTCTCTATGGCTGCAATGTCACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCTCTTCTCTGTCTCTATTTCTTTCTCTATGGCTGCAATGTCACTG  300

seq1  CGCTGGATGCTAATGGTCTCCAGATGTTGATTTCTGGAGAAGTCTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGGATGCTAATGGTCTCCAGATGTTGATTTCTGGAGAAGTCTCTTTT  350

seq1  CTAGGGTTCGGCACAAGATCCTCAACCAACAGGAGCTGACAGCTGCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGTTCGGCACAAGATCCTCAACCAACAGGAGCTGACAGCTGCACAC  400

seq1  GGCCTGCCGTCTAGAAGTCATCCTGCAGGTGGGAACCACAAACAGACCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTGCCGTCTAGAAGTCATCCTGCAGGTGGGAACCACAAACAGACCCA  450

seq1  AGAGTGCTACACCTCAACACCTCCACGTTCCCTGCCCACTGTGCGCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGCTACACCTCAACACCTCCACGTTCCCTGCCCACTGTGCGCCTGC  500

seq1  CTCAGCTGCCCCCTAACCAGCTGCTCAAATAGAAAACGAAAGCATCCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCTGCCCCCTAACCAGCTGCTCAAATAGAAAACGAAAGCATCCCAG  550

seq1  CCCTCATCTTTCACACACTGATACTCCGCACCCACATTCTCTGACAATAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATCTTTCACACACTGATACTCCGCACCCACATTCTCTGACAATAT  600

seq1  CTGTGACTTGGTGTTTGCCTTGGCTATGTCTTGTGCTCTGCCTTCCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTTGGTGTTTGCCTTGGCTATGTCTTGTGCTCTGCCTTCCTCTA  650

seq1  AGCCACAGTCACTGTCCCCAGTGGGTAGCACTGTTTGGAGAGGCTTAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACAGTCACTGTCCCCAGTGGGTAGCACTGTTTGGAGAGGCTTAAGG  700

seq1  GGTGTGGCCTTGGAGGAAGTATGTCATAGGCAATGAGTTCTGAGAGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGGCCTTGGAGGAAGTATGTCATAGGCAATGAGTTCTGAGAGTCTA  750

seq1  AAGACTCAGCATTTCCAGCTCCGTCTCTGCGTTGGCCTTGCAGTTTAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTCAGCATTTCCAGCTCCGTCTCTGCGTTGGCCTTGCAGTTTAGGA  800

seq1  TGTGAACTCCCAACCAGCTTGCTACTCCAGCCGCCATGCTTGCTGCCATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACTCCCAACCAGCTTGCTACTCCAGCCGCCATGCTTGCTGCCATT  850

seq1  CCTTATTTTGCCCATTTCGATGGACTCTTAA-CCTTTAGGATCGTAAGCC  899
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCTTATTTTGCCCATTTCGATGGACTCTTAACCCTTTAGGATCGTAAGCC  900

seq1  CAAATAAACTCTTTCTTTCAGGGATTTCCTCAGTCAAGTTA-TTTTAGCA  948
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAATAAACTCTTTCTTTCAGGGATTTCCTCAGTCAAGTTATTTTTAGCA  950

seq1  CAGCAACAGATAAG-TAATGAGTGCAATTTCCTATCTTTG-AAGTCACCA  996
      |||||||||||||| ||||||||||||||||||||||||| |||||||||
seq2  CAGCAACAGATAAGTTAATGAGTGCAATTTCCTATCTTTGAAAGTCACCA  1000

seq1  CTTTCTGTCTCTCTTTTTTTTGGCTCTCTGACTGGCTTA--GGTCTTTAT  1044
      |||||||||||||||||||||||||||||||||||||||  | |||||||
seq2  CTTTCTGTCTCTCTTTTTTTTGGCTCTCTGACTGGCTTAAGGTTCTTTAT  1050

seq1  CATCCAGGTTTCAGATCTAATGTCATATCCCCAGAAAAGCCATCCTACCG  1094
      ||||  | |||||||||||||||||||||||||| ||||||||| |||||
seq2  CATCAGGTTTTCAGATCTAATGTCATATCCCCAG-AAAGCCATCTTACCG  1099

seq1  TTCCGACCTCCTCAGGACTGTA-CCTCACACTCA-TTTCCTTTGGAGC  1140
      || |||||| |||| ||||||| ||||||||||| ||  | |||||||
seq2  TTTCGACCT-CTCAAGACTGTACCCTCACACTCAGTTAGCCTTGGAGC  1146