BAC Information

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BAC

Clone NameB6Ng01-285C11
Chromosome8 (Build37)
Map Location 116,906,627 - 117,070,153
singlet/doubletdoublet
Overlap geneClec3a, Wwox
Upstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285C11.bB6Ng01-285C11.g
ACCGA083674GA083675
length1,0471,100
definitionB6Ng01-285C11.b B6Ng01-285C11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,906,627 - 116,907,662)(117,069,047 - 117,070,153)
sequence
gaattctacttgaggccaaaaggaagggccaagaagtcctgatgacttaa
agggctgtgctgtgagacagggaaccagaccaacacaaagaaacgcaaca
cctgtgcctgctgcaccctctgctaagcaagcctgaaggcctggttacct
agcacaggttgctgcagctcagctatacaacacttgcttgacctgtgcaa
agctttgggtttaattcctacccccccccccaaaaaaaaaccctctttgt
ttctggacaaaacttttagttgtatttcagaggcaaaacatctagcaaaa
gaactgaaggaaggaagcatagcaggactttctcagacccaccagcgata
taaatcatgacatgggggctttttagtattttaaagcttaggcctgccgg
gcagtggtggcgcatgcctttaatcccagcacgtgggaggcagaggcagg
cagatttctgagttcgaggccagcctggtctacagagtgagttccaggac
agccagggctacacagcgaaaccctgtctcaaaaaaccaaaaaataaaaa
ataaaataaaaaataaaaaaattaaagcttaggccttttagctagagtag
tccctcaaccagctatctaacttaacccaactaatcctgccacttggcta
gttctacttttctgcctggggctctggtctgtctgtttacctccacgtcc
actggtaaatctgtgtctcatttttttctcccagcatatctctctcttct
ctctctctctctctctctctctctctcgctcctgcccagctcttggccgt
cagatctttattacaatcagatacaattctagatcacctctaggctatag
aggaaagatgactattttacaaaatatgaaacccagtgactggctgtaga
aatgacaataccaagatcctgccagcatttagctcctctgcccggtacag
aatttaacaacagaatatacagagacacgcccttcattacaagttgtacc
ccaacaagggaaggattcatgttcgactcatggtttgagggtttagt

gaattccagtgtctgatgctgagcctaagacgctcccagctggaagcagc
cactggcagccatggccagaggcatctgtctctttcctttctcccactac
acgggaaaggcagtctggcaaatggagacaaagcattttgaaaccatcac
gggcatctattcctttcttactttttgatatttggtagaaaaaagagggt
ctgagttgaggagcagtttatgtttttctgtagcattttgacacttgatc
atctgataatctttcattagggaaagtcaactcgagcttaaaataattgt
ttaacctctgcagaaaaatctccaactttgacatcattcaaaatttagtt
tcttatcttgacccaaaatctgttgagacaaggacttctccctgacagtt
agctccctttgtaagaaacacttgtgtggtgatttgaataaaatggagcc
cacaggctcatagggagtggccctattaggagatgtaggcttattggagg
atgtgacactgtgggggtgggctttgggggctcatgtgctcaagctacta
tgagcccagtatggctctccttctactgtctacacagtaagatgtagaac
tctcagctcctcctccagtaacatatctacctgcatgcggccatgttacc
cagtgtgaccataatggactaaccctctgacgccataagctagatccaat
tcaatggtttcctttataaaagtggctgcggtcatggtgtccctcaagag
tcacctctcgaagcctcttccaaagctctggacttgacctttcgtgacag
aagctggactgacaggttcagaattggcgtggtgaggaagagttacagtc
aggaaggaccagaaaccagttccctggacagtgagaagttgcatttgcga
gtggaagaaagtgacatcacatagaaactctcttcagagctcagtatcag
gatgtagctttgggtagtttgcttctgactcccacaccttaggtgacttt
tccataaaaagactgaaaatcttcttttgtagttgcccgctctgcctaac
tttaaggtgaattctaaggctctgcgtaggccagtgtattactttctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116906627_116907662
seq2: B6Ng01-285C11.b_43_1089

seq1  GAATTCTACTTGAGGCCAAAAGGAAGGGCCAAGAAGTCCTGATGACTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACTTGAGGCCAAAAGGAAGGGCCAAGAAGTCCTGATGACTTAA  50

seq1  AGGGCTGTGCTGTGAGACAGGGAACCAGACCAACACAAAGAAACGCAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGTGCTGTGAGACAGGGAACCAGACCAACACAAAGAAACGCAACA  100

seq1  CCTGTGCCTGCTGCACCCTCTGCTAAGCAAGCCTGAAGGCCTGGTTACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTGCCTGCTGCACCCTCTGCTAAGCAAGCCTGAAGGCCTGGTTACCT  150

seq1  AGCACAGGTTGCTGCAGCTCAGCTATACAACACTTGCTTGACCTGTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACAGGTTGCTGCAGCTCAGCTATACAACACTTGCTTGACCTGTGCAA  200

seq1  AGCTTTGGGTTTAATTCCTACCCCCCCCCCCAAAAAAAAACCCTCTTTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGGGTTTAATTCCTACCCCCCCCCCCAAAAAAAAACCCTCTTTGT  250

seq1  TTCTGGACAAAACTTTTAGTTGTATTTCAGAGGCAAAACATCTAGCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGACAAAACTTTTAGTTGTATTTCAGAGGCAAAACATCTAGCAAAA  300

seq1  GAACTGAAGGAAGGAAGCATAGCAGGACTTTCTCAGACCCACCAGCGATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTGAAGGAAGGAAGCATAGCAGGACTTTCTCAGACCCACCAGCGATA  350

seq1  TAAATCATGACATGGGGGCTTTTTAGTATTTTAAAGCTTAGGCCTGCCGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCATGACATGGGGGCTTTTTAGTATTTTAAAGCTTAGGCCTGCCGG  400

seq1  GCAGTGGTGGCGCATGCCTTTAATCCCAGCACGTGGGAGGCAGAGGCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTGGTGGCGCATGCCTTTAATCCCAGCACGTGGGAGGCAGAGGCAGG  450

seq1  CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGAC  500

seq1  AGCCAGGGCTACACAGCGAAACCCTGTCTCAAAAAACCAAAAAATAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGGCTACACAGCGAAACCCTGTCTCAAAAAACCAAAAAATAAAAA  550

seq1  ATAAAATAAAAAATAAAAAAATTAAAGCTTAGGCCTTTTAGCTAGAGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATAAAAAATAAAAAAATTAAAGCTTAGGCCTTTTAGCTAGAGTAG  600

seq1  TCCCTCAACCAGCTATCTAACTTAACCCAACTAATCCTGCCACTTGGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAACCAGCTATCTAACTTAACCCAACTAATCCTGCCACTTGGCTA  650

seq1  GTTCTACTTTTCTGCCTGGGGCTCTGGTCTGTCTGTTTACCTCCACGTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTACTTTTCTGCCTGGGGCTCTGGTCTGTCTGTTTACCTCCACGTCC  700

seq1  ACTGGTAAATCTGTGTCTCATTTTTTTCTCCCAGCATATCTCTCTCTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTAAATCTGTGTCTCATTTTTTTCTCCCAGCATATCTCTCTCTTCT  750

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCCTGCCCAGCTCTTGGCCGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCGCTCCTGCCCAGCTCTTGGCCGT  800

seq1  CAGATCTTTATTACAATCAGATACAATTCTAGATCACCTCTAGGCTATAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCTTTATTACAATCAGATACAATTCTAGATCACCTCTAGGCTATAG  850

seq1  AGGAAAGATGACTA-TTTACAAAATATGAAA-CCAGTGACTGGCTGTAGA  898
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AGGAAAGATGACTATTTTACAAAATATGAAACCCAGTGACTGGCTGTAGA  900

seq1  AATGACAATACCAAGATCCTGCCAGCATTTAGCT-CTCTG-CCGGTACAG  946
      |||||||||||||||||||||||||||||||||| ||||| |||||||||
seq2  AATGACAATACCAAGATCCTGCCAGCATTTAGCTCCTCTGCCCGGTACAG  950

seq1  AA-TTAACAACAGAATATACAGAGACACG-CCTTCA-TACA--GTGTACC  991
      || |||||||||||||||||||||||||| |||||| ||||   ||||||
seq2  AATTTAACAACAGAATATACAGAGACACGCCCTTCATTACAAGTTGTACC  1000

seq1  CCAACAA-GGAAGGGATCATG-TCGACTCAGGGTTTGAGGGTATAGT  1036
      ||||||| ||||||  ||||| |||||||| ||||||||||| ||||
seq2  CCAACAAGGGAAGGATTCATGTTCGACTCATGGTTTGAGGGTTTAGT  1047


seq1: chr8_117069047_117070153
seq2: B6Ng01-285C11.g_69_1168 (reverse)

seq1  TCCAGAAAGT-ATTCACTGCCCTACGCAGAGCCTTAAAAATCACCTTTTA  49
      |||||||||| || ||||| |||||||||||||||| || |||||  |||
seq2  TCCAGAAAGTAATACACTGGCCTACGCAGAGCCTTAGAATTCACC--TTA  48

seq1  AAAGTAAGCAGAGCGGGGCAACTTACAAAAGAAGATTTTCAGTCTTTTTA  99
      ||  || ||||||| ||||||| |||||||||||||||||||||||||||
seq2  AAGTTAGGCAGAGC-GGGCAAC-TACAAAAGAAGATTTTCAGTCTTTTTA  96

seq1  TGGAAAAGTCACCTTAAGGTGTGGGAGGTCAGAAGCAAACTTACCCAAAG  149
      ||||||||||||| |||||||||||| ||||||||||||| |||||||||
seq2  TGGAAAAGTCACC-TAAGGTGTGGGA-GTCAGAAGCAAAC-TACCCAAAG  143

seq1  CTACATCTGGAATACTGAGGCTCTGAAGAGAGTTTCTATGTGATGTCACT  199
      |||||||  | ||||||| |||||||||||||||||||||||||||||||
seq2  CTACATCCTG-ATACTGA-GCTCTGAAGAGAGTTTCTATGTGATGTCACT  191

seq1  TTCTTCCACTCGCAAATGC-ACTTCTCACTGTCCAGGGAACTGGTTTCTG  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCTTCCACTCGCAAATGCAACTTCTCACTGTCCAGGGAACTGGTTTCTG  241

seq1  GTCCTTCCTGACTGTAACTCTTCCTCACCACGCCAATTCTGAACCTGTCA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTTCCTGACTGTAACTCTTCCTCACCACGCCAATTCTGAACCTGTCA  291

seq1  GTCCAGCTTCTGTCACGAAAGGTCAAGTCCAGAGCTTTGGAAGAGGCTTC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGCTTCTGTCACGAAAGGTCAAGTCCAGAGCTTTGGAAGAGGCTTC  341

seq1  GAGAGGTGACTCTTGAGGGACACCATGACCGCAGCCACTTTTATAAAGGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGTGACTCTTGAGGGACACCATGACCGCAGCCACTTTTATAAAGGA  391

seq1  AACCATTGAATTGGATCTAGCTTATGGCGTCAGAGGGTTAGTCCATTATG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTGAATTGGATCTAGCTTATGGCGTCAGAGGGTTAGTCCATTATG  441

seq1  GTCACACTGGGTAACATGGCCGCATGCAGGTAGATATGTTACTGGAGGAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACACTGGGTAACATGGCCGCATGCAGGTAGATATGTTACTGGAGGAG  491

seq1  GAGCTGAGAGTTCTACATCTTACTGTGTAGACAGTAGAAGGAGAGCCATA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGAGAGTTCTACATCTTACTGTGTAGACAGTAGAAGGAGAGCCATA  541

seq1  CTGGGCTCATAGTAGCTTGAGCACATGAGCCCCCAAAGCCCACCCCCACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTCATAGTAGCTTGAGCACATGAGCCCCCAAAGCCCACCCCCACA  591

seq1  GTGTCACATCCTCCAATAAGCCTACATCTCCTAATAGGGCCACTCCCTAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCACATCCTCCAATAAGCCTACATCTCCTAATAGGGCCACTCCCTAT  641

seq1  GAGCCTGTGGGCTCCATTTTATTCAAATCACCACACAAGTGTTTCTTACA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGTGGGCTCCATTTTATTCAAATCACCACACAAGTGTTTCTTACA  691

seq1  AAGGGAGCTAACTGTCAGGGAGAAGTCCTTGTCTCAACAGATTTTGGGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGCTAACTGTCAGGGAGAAGTCCTTGTCTCAACAGATTTTGGGTC  741

seq1  AAGATAAGAAACTAAATTTTGAATGATGTCAAAGTTGGAGATTTTTCTGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAAGAAACTAAATTTTGAATGATGTCAAAGTTGGAGATTTTTCTGC  791

seq1  AGAGGTTAAACAATTATTTTAAGCTCGAGTTGACTTTCCCTAATGAAAGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTTAAACAATTATTTTAAGCTCGAGTTGACTTTCCCTAATGAAAGA  841

seq1  TTATCAGATGATCAAGTGTCAAAATGCTACAGAAAAACATAAACTGCTCC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAGATGATCAAGTGTCAAAATGCTACAGAAAAACATAAACTGCTCC  891

seq1  TCAACTCAGACCCTCTTTTTTCTACCAAATATCAAAAAGTAAGAAAGGAA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTCAGACCCTCTTTTTTCTACCAAATATCAAAAAGTAAGAAAGGAA  941

seq1  TAGATGCCCGTGATGGTTTCAAAATGCTTTGTCTCCATTTGCCAGACTGC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATGCCCGTGATGGTTTCAAAATGCTTTGTCTCCATTTGCCAGACTGC  991

seq1  CTTTCCCGTGTAGTGGGAGAAAGGAAAGAGACAGATGCCTCTGGCCATGG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCCGTGTAGTGGGAGAAAGGAAAGAGACAGATGCCTCTGGCCATGG  1041

seq1  CTGCCAGTGGCTGCTTCCAGCTGGGAGCGTCTTAGGCTCAGCATCAGACA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGTGGCTGCTTCCAGCTGGGAGCGTCTTAGGCTCAGCATCAGACA  1091

seq1  CTGGAATTC  1107
      |||||||||
seq2  CTGGAATTC  1100


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