BAC Information

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BAC

Clone NameB6Ng01-285E17
Chromosome8 (Build37)
Map Location 118,709,607 - 118,869,341
singlet/doubletdoublet
Overlap genenone
Upstream geneWwox, Maf
Downstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2, LOC100043053, 2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285E17.bB6Ng01-285E17.g
ACCGA083780GA083781
length1,146688
definitionB6Ng01-285E17.b B6Ng01-285E17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,709,607 - 118,710,756)(118,868,779 - 118,869,341)
sequence
gaattcattctagcaattgtttccaccagaaacaccctctttcacgccca
tggatgaagctccaatctttcttccactgtgaacttgaaagtcccccaac
attttcaaatgttctttctccttgtttctctctgtccagctctgtcctca
ttcattacacaagaccgcacttaatttatctgttggaaaacagttataca
gtgcctacagtttaagtactgttaactaagtgactgggcaaacagggttc
tgccagcccattatatatataaaccattaagtatatctttgagagattgt
agcaatgggaaggaaaaaaattaagatgcttttctgagagcattagtcaa
gaagggaaaaggtaggctggagagggggctctgtaagtgagggtattgct
accaagcctgactgtctgaatttgaggcccaggacccacatgttagaagg
ggagaatttattccacaagttctctgatttctactacatgtgtgcaatgg
caggcccctgctcccccaaacaaataaatggactatataacaaaaattaa
atgttagagatcctaaatgtaaaacaggataaataattctgagtgtttct
gtcatccttcctatatgtgagtaggttgatgaaaggttcaaaaaaccaca
attaacgcaggttgctttggtccagaaacggggctaagcactatagagcg
gtcatttcccatttgccaaagagcttatgagcatcgtgtctgactccact
cttttgcactcagcatctgaatgcagcccagactgcatcttaaaactccc
caagtcagtcatcatgagggatgtccatgtttcccacattcgcctataag
ctatcacctggagactgaaggcaacaaggtccctgtgagcaccggatcag
aattttccagagggctgtagtccaagtcagtatgcaagccaggtggatta
tatcagattgggtcagacgtgctgagattgaagggaaaacaggaggaggc
atgggccaggtgcaccagacaccttttacaagtgctgtgaactattcctg
tgctcctatatgcctataccttaacctaacagcgaattccaagcaatcac
tagtggctccatattttgttaacgcaggaagagaaatgttcttgag
gaattcactcggacaaccggatccttctatggcaaagcttttattgcttc
aacataaggaagaccctgaacccggaaaatggcgctgcttatatagcccg
cagcgtgacgtttcagcacctgatgtggcgtgacagcacctgattagttg
cttgcccatcaccccattactacgccccgagatgggcagtgactgggcgt
gaattcactcttgcacttgcgcataaggcttgtttactagttaggcgcag
tggaagccagtgccatcttataatggcgattgctcacagcacggctctcc
acactggggcctctgggatgtgtgagtcccatgaggctttgtggggaggc
atgggtctctagctacaaggaccccagaaccatctggaaaatctgagtgt
gtcccggtgatggcagatcttcttgcagagtctgtgcccctcacagagag
ctagttgtcaagtttaggatagcacctgggccattctcctcctccttgtt
tattcagtgatgagtcatggatgacccaggcctgttcgaaacacagggat
tctagacacaacagatcaattctctgcacacacacctcctcactgtgtcc
tgggggtcgagtgcagataattgagaagttacaggaatgatctagaacta
cttttgtagtagtaagtggagtgggagggtgtgtgggc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118709607_118710756
seq2: B6Ng01-285E17.b_45_1190

seq1  GAATTCATTCTAGCAATTGTTTCCACCAGAAACACCCTCTTTCACGCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTAGCAATTGTTTCCACCAGAAACACCCTCTTTCACGCCCA  50

seq1  TGGATGAAGCTCCAATCTTTCTTCCACTGTGAACTTGAAAGTCCCCCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGAAGCTCCAATCTTTCTTCCACTGTGAACTTGAAAGTCCCCCAAC  100

seq1  ATTTTCAAATGTTCTTTCTCCTTGTTTCTCTCTGTCCAGCTCTGTCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATGTTCTTTCTCCTTGTTTCTCTCTGTCCAGCTCTGTCCTCA  150

seq1  TTCATTACACAAGACCGCACTTAATTTATCTGTTGGAAAACAGTTATACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTACACAAGACCGCACTTAATTTATCTGTTGGAAAACAGTTATACA  200

seq1  GTGCCTACAGTTTAAGTACTGTTAACTAAGTGACTGGGCAAACAGGGTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTACAGTTTAAGTACTGTTAACTAAGTGACTGGGCAAACAGGGTTC  250

seq1  TGCCAGCCCATTATATATATAAACCATTAAGTATATCTTTGAGAGATTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCAGCCCATTATATATATAAACCATTAAGTATATCTTTGAGAGATTGT  300

seq1  AGCAATGGGAAGGAAAAAAATTAAGATGCTTTTCTGAGAGCATTAGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATGGGAAGGAAAAAAATTAAGATGCTTTTCTGAGAGCATTAGTCAA  350

seq1  GAAGGGAAAAGGTAGGCTGGAGAGGGGGCTCTGTAAGTGAGGGTATTGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGAAAAGGTAGGCTGGAGAGGGGGCTCTGTAAGTGAGGGTATTGCT  400

seq1  ACCAAGCCTGACTGTCTGAATTTGAGGCCCAGGACCCACATGTTAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGCCTGACTGTCTGAATTTGAGGCCCAGGACCCACATGTTAGAAGG  450

seq1  GGAGAATTTATTCCACAAGTTCTCTGATTTCTACTACATGTGTGCAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAATTTATTCCACAAGTTCTCTGATTTCTACTACATGTGTGCAATGG  500

seq1  CAGGCCCCTGCTCCCCCAAACAAATAAATGGACTATATAACAAAAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCCCTGCTCCCCCAAACAAATAAATGGACTATATAACAAAAATTAA  550

seq1  ATGTTAGAGATCCTAAATGTAAAACAGGATAAATAATTCTGAGTGTTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTAGAGATCCTAAATGTAAAACAGGATAAATAATTCTGAGTGTTTCT  600

seq1  GTCATCCTTCCTATATGTGAGTAGGTTGATGAAAGGTTCAAAAAACCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATCCTTCCTATATGTGAGTAGGTTGATGAAAGGTTCAAAAAACCACA  650

seq1  ATTAACGCAGGTTGCTTTGGTCCAGAAACGGGGCTAAGCACTATAGAGCG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACGCAGGTTGCTTTGGTCCAGAAACGGGGCTAAGCACTATAGAGCG  700

seq1  GTCATTTCCCATTTGCCAAAGAGCTTATGAGCATCGTGTCTGACTCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTCCCATTTGCCAAAGAGCTTATGAGCATCGTGTCTGACTCCACT  750

seq1  CTTTTGCACTCAGCATCTGAATGCAGCCCAGACTGCATCTTAAAACTCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCACTCAGCATCTGAATGCAGCCCAGACTGCATCTTAAAACTCCC  800

seq1  CAAGTCAGTCATCATGAGGGATGTCCATGTTTCCCACATTCGCCTATAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGTCATCATGAGGGATGTCCATGTTTCCCACATTCGCCTATAAG  850

seq1  CTATCACCTGGAGACTGAAGGCAACAAGGTCCCTGTGAGCACCGGATCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCACCTGGAGACTGAAGGCAACAAGGTCCCTGTGAGCACCGGATCAG  900

seq1  AATTTTCCAGAGGGGCTGTAGTCCAAGTCAGTATGCAAGCCAGGTGGATT  950
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCCAGA-GGGCTGTAGTCCAAGTCAGTATGCAAGCCAGGTGGATT  949

seq1  ATATCAGGATTGGGTCAGGACGTGCTGAGATTGAAGGGAAAACAGGAAGG  1000
      |||||| |||||||||| |||||||||||||||||||||||||||| |||
seq2  ATATCA-GATTGGGTCA-GACGTGCTGAGATTGAAGGGAAAACAGG-AGG  996

seq1  AGGGCAATGGCCAGGTGGCAACAAGGACA-CTTTTACAAGTGCTGTG-AC  1048
      | ||||  |||||||| ||| ||  |||| ||||||||||||||||| ||
seq2  A-GGCATGGGCCAGGT-GCACCA--GACACCTTTTACAAGTGCTGTGAAC  1042

seq1  TA-TCCTGTTGCTCCCTATATGCCTATA-CTTTACCTAACAGCG-ATTCA  1095
      || ||||| |||| |||||||||||||| ||| ||||||||||| |||| 
seq2  TATTCCTG-TGCT-CCTATATGCCTATACCTTAACCTAACAGCGAATTCC  1090

seq1  AAGCAATCA-TAGGTGCTCCATATTTGTTAAACGCAGGAA-AGAAATAGT  1143
      ||||||||| |||  |||||||||||  | |||||||||| |||||| ||
seq2  AAGCAATCACTAGTGGCTCCATATTTTGTTAACGCAGGAAGAGAAAT-GT  1139

seq1  TCCTGAG  1150
      || ||||
seq2  TCTTGAG  1146

seq1: chr8_118868779_118869341
seq2: B6Ng01-285E17.g_192_754 (reverse)

seq1  GCCCACACACCCTCCCACTCCACTTACTACTACAAAAGTAGTTCTAGATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCACACACCCTCCCACTCCACTTACTACTACAAAAGTAGTTCTAGATC  50

seq1  ATTCCTGTAACTTCTCAATTATCTGCACTCGACCCCCAGGACACAGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGTAACTTCTCAATTATCTGCACTCGACCCCCAGGACACAGTGAG  100

seq1  GAGGTGTGTGTGCAGAGAATTGATCTGTTGTGTCTAGAATCCCTGTGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGTGTGTGCAGAGAATTGATCTGTTGTGTCTAGAATCCCTGTGTTT  150

seq1  CGAACAGGCCTGGGTCATCCATGACTCATCACTGAATAAACAAGGAGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACAGGCCTGGGTCATCCATGACTCATCACTGAATAAACAAGGAGGAG  200

seq1  GAGAATGGCCCAGGTGCTATCCTAAACTTGACAACTAGCTCTCTGTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGCCCAGGTGCTATCCTAAACTTGACAACTAGCTCTCTGTGAGG  250

seq1  GGCACAGACTCTGCAAGAAGATCTGCCATCACCGGGACACACTCAGATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAGACTCTGCAAGAAGATCTGCCATCACCGGGACACACTCAGATTT  300

seq1  TCCAGATGGTTCTGGGGTCCTTGTAGCTAGAGACCCATGCCTCCCCACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATGGTTCTGGGGTCCTTGTAGCTAGAGACCCATGCCTCCCCACAA  350

seq1  AGCCTCATGGGACTCACACATCCCAGAGGCCCCAGTGTGGAGAGCCGTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCATGGGACTCACACATCCCAGAGGCCCCAGTGTGGAGAGCCGTGC  400

seq1  TGTGAGCAATCGCCATTATAAGATGGCACTGGCTTCCACTGCGCCTAACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCAATCGCCATTATAAGATGGCACTGGCTTCCACTGCGCCTAACT  450

seq1  AGTAAACAAGCCTTATGCGCAAGTGCAAGAGTGAATTCACGCCCAGTCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAACAAGCCTTATGCGCAAGTGCAAGAGTGAATTCACGCCCAGTCAC  500

seq1  TGCCCATCTCGGGGCGTAGTAATGGGGTGATGGGCAAGCAACTAATCAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATCTCGGGGCGTAGTAATGGGGTGATGGGCAAGCAACTAATCAGG  550

seq1  TGCTGTCACGCCA  563
      |||||||||||||
seq2  TGCTGTCACGCCA  563