BAC Information

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BAC

Clone NameB6Ng01-285K24
Chromosome8 (Build37)
Map Location 64,830,013 - 64,966,571
singlet/doubletdoublet
Overlap geneLOC384830
Upstream geneSh3rf1, EG664975, Cbr4, Palld, LOC100040872, BC013672, Anxa10, LOC100040775
Downstream geneLOC100040804, LOC665267, Spock3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285K24.bB6Ng01-285K24.g
ACCGA084071GA084072
length427347
definitionB6Ng01-285K24.b B6Ng01-285K24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,830,013 - 64,830,445)(64,966,226 - 64,966,571)
sequence
aattgagagaattcttttataaaaggctatttaaacttttaaaaatatgc
atgcaatatctatagtacttcattttcaaaatctaagtgttaggtggaaa
aacgaaaaaaatatagaatctcaattcccttggatgtaagcaagccaaat
ttaacagtgaatgtacattttatgtcatgtaaagcagaactttaatatat
ctgtgaacagatgcatttaccaacataatgtgttatctttacctgaatat
tttatcatgtatgttttggtgatgagcaaaaagataacaaaaacgtgtaa
gacttatgtaaactaagcaatagtacaaaataacataaggctcaatatta
aatacaagcattatgatatgctctggaaaggatgtttactaaccagaatg
aataaggtatattataagggagggagg

caagatgcctatgttttgttgagtgaaaagaaaatgtctagtgttccgtc
cattgtacctgctcttgaaattgctaatgctcatcagaagccttggtcat
aattgctgaagatggtgacagagaaactttaaggacattggttttgaaca
ggctaacagttggtcttcaagttgtagcagtcaaagctccagggtttggg
gacaataggaagaaccagcttaaaaatatggctattgctagtggtggtgt
ggtgtttggagaaaaggggttgaatatgaatcttgaagatgttcaagctc
atgacttttagaaaagtttttgaggtctttgtcaccaaaattggtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_64830013_64830445
seq2: B6Ng01-285K24.b_46_478

seq1  GAATTCAATTGAGAGAATTCTTTTATAAAAGGCTATTTAAACTTTTAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTGAGAGAATTCTTTTATAAAAGGCTATTTAAACTTTTAAAA  50

seq1  ATATGCATGCAATATCTATAGTACTTCATTTTCAAAATCTAAGTGTTAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCATGCAATATCTATAGTACTTCATTTTCAAAATCTAAGTGTTAGG  100

seq1  TGGAAAAACGAAAAAAATATAGAATCTCAATTCCCTTGGATGTAAGCAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAAACGAAAAAAATATAGAATCTCAATTCCCTTGGATGTAAGCAAG  150

seq1  CCAAATTTAACAGTGAATGTACATTTTATGTCATGTAAAGCAGAACTTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATTTAACAGTGAATGTACATTTTATGTCATGTAAAGCAGAACTTTA  200

seq1  ATATATCTGTGAACAGATGCATTTACCAACATAATGTGTTATCTTTACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTGTGAACAGATGCATTTACCAACATAATGTGTTATCTTTACCT  250

seq1  GAATATTTTATCATGTATGTTTTGGTGATGAGCAAAAAGATAACAAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATTTTATCATGTATGTTTTGGTGATGAGCAAAAAGATAACAAAAAC  300

seq1  GTGTAAGACTTATGTAAACTAAGCAATAGTACAAAATAACATAAGGCTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAGACTTATGTAAACTAAGCAATAGTACAAAATAACATAAGGCTCA  350

seq1  ATATTAAATACAAGCATTATGATATGCTCTGGAAAGGATGTTTACTAACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAAATACAAGCATTATGATATGCTCTGGAAAGGATGTTTACTAACC  400

seq1  AGAATGAATAAGGTATATTATAAGGGAGGGAGG  433
      |||||||||||||||||||||||||||||||||
seq2  AGAATGAATAAGGTATATTATAAGGGAGGGAGG  433


seq1: chr8_64966226_64966571
seq2: B6Ng01-285K24.g_74_420 (reverse)

seq1  GCACCATTTTTGGTGACAATGACCTCTAAAACTTTTC-CTAAGTCATGAG  49
      |||||| |||||||||||| |||||| ||||||||||   ||||||||||
seq2  GCACCAATTTTGGTGACAAAGACCTCAAAAACTTTTCTAAAAGTCATGAG  50

seq1  CTTGAACATCTTCAAGATTCATATTCAACCCCTTTTCTCCAAACACCACA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAACATCTTCAAGATTCATATTCAACCCCTTTTCTCCAAACACCACA  100

seq1  CCACCACTAGCAATAGCCATATTTTTAAGCTGGTTCTTCCTATTGTCCCC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCACTAGCAATAGCCATATTTTTAAGCTGGTTCTTCCTATTGTCCCC  150

seq1  AAACCCTGGAGCTTTGACTGCTACAACTTGAAGACCAACTGTTAGCCTGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGGAGCTTTGACTGCTACAACTTGAAGACCAACTGTTAGCCTGT  200

seq1  TCAAAACCAATGTCCTTAAAGTTTCTCTGTCACCATCTTCAGCAATTATG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAACCAATGTCCTTAAAGTTTCTCTGTCACCATCTTCAGCAATTATG  250

seq1  ACCAAGGCTTCTGATGAGCATTAGCAATTTCAAGAGCAGGTACAATGGAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAGGCTTCTGATGAGCATTAGCAATTTCAAGAGCAGGTACAATGGAC  300

seq1  GGAACACTAGACATTTTCTTTTCACTCAACAAAACATAGGCATCTTG  346
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACTAGACATTTTCTTTTCACTCAACAAAACATAGGCATCTTG  347


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