BAC Information

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BAC

Clone NameB6Ng01-285P15
Chromosome8 (Build37)
Map Location 68,613,756 - 68,761,891
singlet/doubletdoublet
Overlap geneMarch1
Upstream geneLOC665388, LOC665396, LOC100040949, LOC665405, Vaultrc-ps1, LOC100040967, LOC100040986
Downstream gene1810029B16Rik, Tktl2, Npy5r, Npy1r, BC053440, LOC665453
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-285P15.bB6Ng01-285P15.g
ACCGA084289GA084290
length1,1631,158
definitionB6Ng01-285P15.b B6Ng01-285P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(68,613,756 - 68,614,923)(68,760,731 - 68,761,891)
sequence
gaattcttcagccactagagaactaggtagaaagtgccattcatgatttg
attcctttcactttgaaagcttaatatgtggacatatctaagcagattaa
gcaatcctgctgtctcactgttgaatgttctgcatactaacttgtcatac
tactgctgtgctttaaatatcactatcaaagttcatgtcgagggcagagg
agatggctcaatgagtacaagtatttggtgcacaagtataagggcctcat
ttcagattttcaaaacccatttaaatccagatacagtagaatacatctcc
tggccaagtagttgaaatatgagatggaagtggagtataggggaattgct
cttggaaatcacaggctagctagcttttcatatgcagtagtgaacaagag
actgtctcaaacaagcttgaaagaaaagaacagaaatcatgggtcgtcct
ctgatttccaaacaacataacatgcctctcccccccatacagacatacac
acacagacacacacccacagatacacccacggaaacacagacagacagac
agacagacacacacacacacacacacccgtatcctggtacacctgcgaag
ctctcaagatgtttgtggcttatatgaggaagtcaggtgcaagtcatacg
acttagctgcagtccctggcgcctttgggactgctgccacacccgctcct
cacaaccgtcaactgttttgtctccatttgtattaatctttagaagagag
aagcagtctataccctgctactttatagtgatgccctttcagatttcaga
tcccgttggggaagaaatccagtgtattatgggatcactttggaaagcac
ctgcttgctctatactgtggtcactgcttttccccccatattgtttattt
tcatttactgtgagcccagtgtctatacattctattagtagaagtgatca
ttttgtgaaacatatttttagaaaaataataatgcatatgtatgacctcc
tagaaatctctgttacctcagtaaagaaacacacaaagcaaagtgtgggt
agttgaatctgcattctgttacctctgagctacacctttttgttactgag
ttctgttacaaaatcctcatggtgaatgtcattccaattaactaggaatg
caaataatccctg

gaattctctctgatgaaatcttctttcagccttcaaaacaatccccacag
gtaacattccaagatatataaattcacaacctaaaattcacaaacaaaca
aagcactgtgggtgagtcaggaaataaaactccagctaaaatttggcatg
cagaggctttgaattctgacactgcaagacaagtcatatgttcaatgtgt
ttaataagataaatgaaagcattggatgcagcagtggagacaagcatctt
agaattatcaagaagattctaagatgaattgaacagcataaaacaggaca
tcgaagtactaaaataacataatgcaatggtatttgaaatttaaagttta
gaatacaaatttaataatatttttgaatttttggtgagataattaatgaa
ctggaacatttaaagttgagaattctacctagaatactgggaacagaaga
caagccgaaacagagctttagagtcatttagagtcataaattatttaata
agaaggcgataaagattttatttaactattttagtcattttagctttcca
aaaatattttagaatatgattaataatttgcacacaaagaatgctggtat
tattaatgacaggtatagaactttttgggataattggtattaatttactc
tctcatcagtggtcaggcagtgaatttctaagaagagatcagtggcagat
tggaagtgaatggaaaccagcattatgtctattaggttcaagtataggat
ttagttacaacaaggagagagagagagagtagtaactccatctctgaccc
tccaatatcttgagtgttaggttttcttggccagtgaatttctgtagccc
atcagatcagtgttctgtcctagaaatatctggctcctgtacaataagaa
ccgatattaaaaaagtgggcttcttgggtacacatgatcaggtacacatg
atcgggtacacatgatcaggtacacacttaagcagaaaggagtgcagact
aaccaggaacagggaaaaagatcttccaaataagtgatacactacacagg
ggccaggaactccctactctttgcaaggagtgcctctgttctggggtcac
tcttcagttatgtacctatgcctagagctgttgaataatttatggcttac
ccttgaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_68613756_68614923
seq2: B6Ng01-285P15.b_46_1208

seq1  GAATTCTTCAGCCACTAGAGAACTAGGTAGAAAGTGCCATTCATGATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCAGCCACTAGAGAACTAGGTAGAAAGTGCCATTCATGATTTG  50

seq1  ATTCCTTTCACTTTGAAAGCTTAATATGTGGACATATCTAAGCAGATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTCACTTTGAAAGCTTAATATGTGGACATATCTAAGCAGATTAA  100

seq1  GCAATCCTGCTGTCTCACTGTTGAATGTTCTGCATACTAACTTGTCATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCCTGCTGTCTCACTGTTGAATGTTCTGCATACTAACTTGTCATAC  150

seq1  TACTGCTGTGCTTTAAATATCACTATCAAAGTTCATGTCGAGGGCAGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGCTTTAAATATCACTATCAAAGTTCATGTCGAGGGCAGAGG  200

seq1  AGATGGCTCAATGAGTACAAGTATTTGGTGCACAAGTATAAGGGCCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGCTCAATGAGTACAAGTATTTGGTGCACAAGTATAAGGGCCTCAT  250

seq1  TTCAGATTTTCAAAACCCATTTAAATCCAGATACAGTAGAATACATCTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTTTCAAAACCCATTTAAATCCAGATACAGTAGAATACATCTCC  300

seq1  TGGCCAAGTAGTTGAAATATGAGATGGAAGTGGAGTATAGGGGAATTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAAGTAGTTGAAATATGAGATGGAAGTGGAGTATAGGGGAATTGCT  350

seq1  CTTGGAAATCACAGGCTAGCTAGCTTTTCATATGCAGTAGTGAACAAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAATCACAGGCTAGCTAGCTTTTCATATGCAGTAGTGAACAAGAG  400

seq1  ACTGTCTCAAACAAGCTTGAAAGAAAAGAACAGAAATCATGGGTCGTCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTCTCAAACAAGCTTGAAAGAAAAGAACAGAAATCATGGGTCGTCCT  450

seq1  CTGATTTCCAAACAACATAACATGCCTCTCCCCCCCATACAGACATACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCAAACAACATAACATGCCTCTCCCCCCCATACAGACATACAC  500

seq1  ACACAGACACACACCCACAGATACACCCACGGAAACACAGACAGACAGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGACACACACCCACAGATACACCCACGGAAACACAGACAGACAGAC  550

seq1  AGACAGACACACACACACACACACACCCGTATCCTGGTACACCTGCGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGACACACACACACACACACACCCGTATCCTGGTACACCTGCGAAG  600

seq1  CTCTCAAGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAAGTCATACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAGATGTTTGTGGCTTATATGAGGAAGTCAGGTGCAAGTCATACG  650

seq1  ACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGCTGCCACACCCGCTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGCTGCAGTCCCTGGCGCCTTTGGGACTGCTGCCACACCCGCTCCT  700

seq1  CACAACCGTCAACTGTTTTGTCTCCATTTGTATTAATCTTTAGAAGAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACCGTCAACTGTTTTGTCTCCATTTGTATTAATCTTTAGAAGAGAG  750

seq1  AAGCAGTCTATACCCTGCTACTTTATAGTGATGCCCTTTCAGATTTCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGTCTATACCCTGCTACTTTATAGTGATGCCCTTTCAGATTTCAGA  800

seq1  TCCCGTTGGGGAAGAAATCCAGTGTATTATGGGATCACTTTGGAAAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGTTGGGGAAGAAATCCAGTGTATTATGGGATCACTTTGGAAAGCAC  850

seq1  CTGCTTGCTCTATACTGTGGTCACTGCTTTTCCCCCCATATTGTTTATTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGCTCTATACTGTGGTCACTGCTTTTCCCCCCATATTGTTTATTT  900

seq1  TCATTTACTGTGAGCCCAGTGTCTATACATTCTATAGGTAGAAGTGATCA  950
      |||||||||||||||||||||||||||||||||||  |||||||||||||
seq2  TCATTTACTGTGAGCCCAGTGTCTATACATTCTATTAGTAGAAGTGATCA  950

seq1  -TTTGTGAAACATA-TTTTAGAAAAATAATAATGCATATGTATGA-CTCC  997
       ||||||||||||| |||||||||||||||||||||||||||||| ||||
seq2  TTTTGTGAAACATATTTTTAGAAAAATAATAATGCATATGTATGACCTCC  1000

seq1  TAGAAATCTCTGTTTAACCTCAGTAAAGGAAACAACACAAAGCAAAGTGT  1047
      ||||||||||||||  ||||||||||| ||||| ||||||||||||||||
seq2  TAGAAATCTCTGTT--ACCTCAGTAAA-GAAAC-ACACAAAGCAAAGTGT  1046

seq1  GGGTAGTTTGAAATCTGCATTCTGT--ACTCTGAAGCTAACACCTTTT--  1093
      ||||||||   ||||||||||||||   ||||| |||| |||||||||  
seq2  GGGTAGTT--GAATCTGCATTCTGTTACCTCTG-AGCT-ACACCTTTTTG  1092

seq1  GTACTGAGGTTTCCTGTTACAAAAT-CTCAT-GTGAAAATTGTTCATT-C  1140
       |||||||   | |||||||||||| ||||| |||||   || ||||| |
seq2  TTACTGAG---TTCTGTTACAAAATCCTCATGGTGAA---TG-TCATTCC  1135

seq1  TATTAACTAGGAATGAAAATTATCCCTG  1168
       |||||||||||||| |||| |||||||
seq2  AATTAACTAGGAATGCAAATAATCCCTG  1163


seq1: chr8_68760731_68761891
seq2: B6Ng01-285P15.g_68_1225 (reverse)

seq1  TCTCAAGG---AACCATAAAATTATCACACAGCTCCTAGACCATAGTTAC  47
      ||||||||   | |||| |||||||   |||||| ||||  ||||| |||
seq2  TCTCAAGGGTAAGCCAT-AAATTATTCAACAGCT-CTAG-GCATAGGTAC  47

seq1  ATTACTGAAGAGTGACCCCAGAAACAGA-GCACTCCTTTGCAAAGAGGTA  96
      || |||||||||||||||||| |||||| ||||||| ||||||||| |||
seq2  ATAACTGAAGAGTGACCCCAG-AACAGAGGCACTCC-TTGCAAAGA-GTA  94

seq1  GGGAG-TCCTGGCCCCTGTGTTAGTGTATCACTTTATTTGGGAAGATCTT  145
      ||||| |||||||||||||| ||||||||||| |||||| ||||||||||
seq2  GGGAGTTCCTGGCCCCTGTG-TAGTGTATCAC-TTATTT-GGAAGATCTT  141

seq1  TT--CCTGTTCCTGGTTTAGTCTGCACTCCTTTCTGCTTAAGTGTGTACC  193
      ||  ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TTTCCCTGTTCCTGG-TTAGTCTGCACTCCTTTCTGCTTAAGTGTGTACC  190

seq1  TGATCATGTGTACCCGATCATGTGTACCTGATCATGTGTACCCAAGAAGC  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCATGTGTACCCGATCATGTGTACCTGATCATGTGTACCCAAGAAGC  240

seq1  CCAC-TTTTTAATATCGGTTCTTATTTGTACAGGAGCCAGATATTTCTAG  292
      |||| ||||||||||||||||||| |||||||||||||||||||||||||
seq2  CCACTTTTTTAATATCGGTTCTTA-TTGTACAGGAGCCAGATATTTCTAG  289

seq1  GACAGAACACTGATCTGATGGGCTACAGAAATTCACTGGCCAAGAAAACC  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAACACTGATCTGATGGGCTACAGAAATTCACTGGCCAAGAAAACC  339

seq1  TAACACTCAAGATATTGGAGGGTCAGAGATGGAGTTACTACTCTCTCTCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACACTCAAGATATTGGAGGGTCAGAGATGGAGTTACTACTCTCTCTCT  389

seq1  CTCTCCTTGTTGTAACTAAATCCTATACTTGAACCTAATAGACATAATGC  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTTGTTGTAACTAAATCCTATACTTGAACCTAATAGACATAATGC  439

seq1  TGGTTTCCATTCACTTCCAATCTGCCACTGATCTCTTCTTAGAAATTCAC  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCCATTCACTTCCAATCTGCCACTGATCTCTTCTTAGAAATTCAC  489

seq1  TGCCTGACCACTGATGAGAGAGTAAATTAATACCAATTATCCCAAAAAGT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACCACTGATGAGAGAGTAAATTAATACCAATTATCCCAAAAAGT  539

seq1  TCTATACCTGTCATTAATAATACCAGCATTCTTTGTGTGCAAATTATTAA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATACCTGTCATTAATAATACCAGCATTCTTTGTGTGCAAATTATTAA  589

seq1  TCATATTCTAAAATATTTTTGGAAAGCTAAAATGACTAAAATAGTTAAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTCTAAAATATTTTTGGAAAGCTAAAATGACTAAAATAGTTAAAT  639

seq1  AAAATCTTTATCGCCTTCTTATTAAATAATTTATGACTCTAAATGACTCT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCTTTATCGCCTTCTTATTAAATAATTTATGACTCTAAATGACTCT  689

seq1  AAAGCTCTGTTTCGGCTTGTCTTCTGTTCCCAGTATTCTAGGTAGAATTC  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTGTTTCGGCTTGTCTTCTGTTCCCAGTATTCTAGGTAGAATTC  739

seq1  TCAACTTTAAATGTTCCAGTTCATTAATTATCTCACCAAAAATTCAAAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTAAATGTTCCAGTTCATTAATTATCTCACCAAAAATTCAAAAA  789

seq1  TATTATTAAATTTGTATTCTAAACTTTAAATTTCAAATACCATTGCATTA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAAATTTGTATTCTAAACTTTAAATTTCAAATACCATTGCATTA  839

seq1  TGTTATTTTAGTACTTCGATGTCCTGTTTTATGCTGTTCAATTCATCTTA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATTTTAGTACTTCGATGTCCTGTTTTATGCTGTTCAATTCATCTTA  889

seq1  GAATCTTCTTGATAATTCTAAGATGCTTGTCTCCACTGCTGCATCCAATG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCTTCTTGATAATTCTAAGATGCTTGTCTCCACTGCTGCATCCAATG  939

seq1  CTTTCATTTATCTTATTAAACACATTGAACATATGACTTGTCTTGCAGTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCATTTATCTTATTAAACACATTGAACATATGACTTGTCTTGCAGTG  989

seq1  TCAGAATTCAAAGCCTCTGCATGCCAAATTTTAGCTGGAGTTTTATTTCC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTCAAAGCCTCTGCATGCCAAATTTTAGCTGGAGTTTTATTTCC  1039

seq1  TGACTCACCCACAGTGCTTTGTTTGTTTGTGAATTTTAGGTTGTGAATTT  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCACCCACAGTGCTTTGTTTGTTTGTGAATTTTAGGTTGTGAATTT  1089

seq1  ATATATCTTGGAATGTTACCTGTGGGGATTGTTTTGAAGGCTGAAAGAAG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCTTGGAATGTTACCTGTGGGGATTGTTTTGAAGGCTGAAAGAAG  1139

seq1  ATTTCATCAGAGAGAATTC  1161
      |||||||||||||||||||
seq2  ATTTCATCAGAGAGAATTC  1158


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