BAC Information

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BAC

Clone NameB6Ng01-286F14
Chromosome10 (Build37)8 (Build37)
Map Location 122,173,280 - 122,174,415107,260,474 - 107,260,589
singlet/doubletsingletsinglet
Overlap genePpm1h
Upstream geneBC048403, Srgap1, EG216394, LOC668272, Tmem5, LOC100043513, LOC668275, Avpr1a
Downstream geneD630033A02Rik, Mon2, Usp15, LOC100042958, AI851790
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-286F14.bB6Ng01-286F14.g
ACCGA084570GA084571
length1,137213
definitionB6Ng01-286F14.b B6Ng01-286F14.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(122,173,280 - 122,174,415)(107,260,474 - 107,260,589)
sequence
gaattctttccccgtaccgtacccctttctgtccttcttaccgtttgacc
tcccaccttctcccaagacatataaccctgtcctgttacagaagtcctgt
cacacaacccacattggatttaaactcttgcctcagttcccctgcccacc
agtgcttccactacagcctgtgccaccacacccaacttctcattttattt
cttaaaatgtggtctcctctcaggagggaaacattctccccttcttaggt
gctaccgaagtgtgaagtgtagtcaaagtggaaagtcactctagtggggg
actctaagggggaaacctcagtaggaaataataggccatggactggtgga
gcgttgtggggcagctggtttcaatttgataccactttttgctaatttta
gcttttattaaagacggaagtaactttagcacatgatgctttggtctcta
aaactgtgttttgaggaacacaagtgtctcttgggggctgggggccggaa
gttgtagtttcaagatctgattaaaaatcataaaattatatatatacata
catacatatatatatatatatatatgtatatatgtatatacatgtgtgtg
tgtattgaaaacaactatctatgattttttttatttaaaaaatatttatt
tattctttaaataaaaaatagccaagccaatccaaaccaacaaacaaaac
tttccagggctgcagagatggctcagcaattaagaacactggctgctctt
ccagagggcctaggttagattcccagccttatgtagctccccacaagcac
ttatttaattcccggccccaggggattcaatgcccacttccggtttccaa
ggacatcagttacatgcatcatgtgaagacatacatgcaagcaaagcctc
caacatacaaaagaaattaacaggttaagaattgcttctccctcattctc
ttgactgaatgacaggcggccttttgcccttgctagaggccagtcttgaa
ctctgggatggtccacgtggaccaaagtcttgttccctgttgggcggtga
cagggacaagttctaaagactgatcattttcggagttactctttcccttt
cgtattaccctcgaagcagtgtcggtctacctcttcc

aatctctgccgtcaagaaaaggatgatgggaagaaagaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
gaaggaaggaaggaaggaaggaaggaaggaaggaagaaagaaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_122173280_122174415
seq2: B6Ng01-286F14.b_50_1186 (reverse)

seq1  GGAAGAGGGAAAGAACCGACACAGGCTTCTGAGGGAAATACGAAAGGGAA  50
      |||||||| |    ||||||||  ||||| ||||| ||||||||||||||
seq2  GGAAGAGGTA---GACCGACAC-TGCTTC-GAGGGTAATACGAAAGGGAA  45

seq1  AGAGTAACCTCCCCTAAATGATCAGTCCTTAGAACTGTCCCCTGTCA-CG  99
      ||||||||   ||  |||||||||||| ||||||||   |||||||| ||
seq2  AGAGTAAC--TCCGAAAATGATCAGTCTTTAGAACTTGTCCCTGTCACCG  93

seq1  CCC-ACAGGGA--CAGACTTTGGTCCACGTGGACCATCCCAGAGTTCAAG  146
      ||| |||||||   ||||||||||||||||||||||||||||||||||||
seq2  CCCAACAGGGAACAAGACTTTGGTCCACGTGGACCATCCCAGAGTTCAAG  143

seq1  ACTGGCCTCTAGC-AGGGCAGAA-GCCGCCTGTCATTCAGTCAAGAGAAT  194
      ||||||||||||| |||||| || ||||||||||||||||||||||||||
seq2  ACTGGCCTCTAGCAAGGGCAAAAGGCCGCCTGTCATTCAGTCAAGAGAAT  193

seq1  GAGGGAGAAGCAATTCTTAA-CTGTTAATTTCTTTTGTATGTTGGAGGCT  243
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAGGGAGAAGCAATTCTTAACCTGTTAATTTCTTTTGTATGTTGGAGGCT  243

seq1  TTGCTTGCATGTATGTCTTCACATGATGCATGTAACTGATGTCCTTGGAA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTGCATGTATGTCTTCACATGATGCATGTAACTGATGTCCTTGGAA  293

seq1  ACCGGAAGTGGGCATTGAATCCCCTGGGGCC-GGAATTAAATAAGTGCTT  342
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCGGAAGTGGGCATTGAATCCCCTGGGGCCGGGAATTAAATAAGTGCTT  343

seq1  GTGGGGAGCTACATAAGGCTGGGAATCTAACCTAGGCCCTCTGGAAGAGC  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGGAGCTACATAAGGCTGGGAATCTAACCTAGGCCCTCTGGAAGAGC  393

seq1  AGCCAGTGTTCTTAATTGCTGAGCCATCTCTGCAGCCCTGGAAAGTTTTG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGTGTTCTTAATTGCTGAGCCATCTCTGCAGCCCTGGAAAGTTTTG  443

seq1  TTTGTTGGTTTGGATTGGCTTGGCTATTTTTTATTTAAAGAATAAATAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTGGTTTGGATTGGCTTGGCTATTTTTTATTTAAAGAATAAATAAA  493

seq1  TATTTTTTAAATAAAAAAAATCATAGATAGTTGTTTTCAATACACACACA  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTAAATAAAAAAAATCATAGATAGTTGTTTTCAATACACACACA  543

seq1  CATGTATATACATATATACATATATATATATATATATATGTATGTATGTA  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATATACATATATACATATATATATATATATATATGTATGTATGTA  593

seq1  TATATATAATTTTATGATTTTTAATCAGATCTTGAAACTACAACTTCCGG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAATTTTATGATTTTTAATCAGATCTTGAAACTACAACTTCCGG  643

seq1  CCCCCAGCCCCCAAGAGACACTTGTGTTCCTCAAAACACAGTTTTAGAGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCAGCCCCCAAGAGACACTTGTGTTCCTCAAAACACAGTTTTAGAGA  693

seq1  CCAAAGCATCATGTGCTAAAGTTACTTCCGTCTTTAATAAAAGCTAAAAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCATCATGTGCTAAAGTTACTTCCGTCTTTAATAAAAGCTAAAAT  743

seq1  TAGCAAAAAGTGGTATCAAATTGAAACCAGCTGCCCCACAACGCTCCACC  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAAAGTGGTATCAAATTGAAACCAGCTGCCCCACAACGCTCCACC  793

seq1  AGTCCATGGCCTATTATTTCCTACTGAGGTTTCCCCCTTAGAGTCCCCCA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCATGGCCTATTATTTCCTACTGAGGTTTCCCCCTTAGAGTCCCCCA  843

seq1  CTAGAGTGACTTTCCACTTTGACTACACTTCACACTTCGGTAGCACCTAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTGACTTTCCACTTTGACTACACTTCACACTTCGGTAGCACCTAA  893

seq1  GAAGGGGAGAATGTTTCCCTCCTGAGAGGAGACCACATTTTAAGAAATAA  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGAGAATGTTTCCCTCCTGAGAGGAGACCACATTTTAAGAAATAA  943

seq1  AATGAGAAGTTGGGTGTGGTGGCACAGGCTGTAGTGGAAGCACTGGTGGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGAAGTTGGGTGTGGTGGCACAGGCTGTAGTGGAAGCACTGGTGGG  993

seq1  CAGGGGAACTGAGGCAAGAGTTTAAATCCAATGTGGGTTGTGTGACAGGA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGGAACTGAGGCAAGAGTTTAAATCCAATGTGGGTTGTGTGACAGGA  1043

seq1  CTTCTGTAACAGGACAGGGTTATATGTCTTGGGAGAAGGTGGGAGGTCAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAACAGGACAGGGTTATATGTCTTGGGAGAAGGTGGGAGGTCAA  1093

seq1  ACGGTAAGAAGGACAGAAAGGGGTACGGTACGGGGAAAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTAAGAAGGACAGAAAGGGGTACGGTACGGGGAAAGAATTC  1137


seq1: chr8_107260474_107260589
seq2: B6Ng01-286F14.g_173_288 (reverse)

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTC  50

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTCCTTCCTTCCTTCCTTCCTT  100

seq1  CCTTCCTTCCTTCCTT  116
      ||||||||||||||||
seq2  CCTTCCTTCCTTCCTT  116


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